CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 2
vacuole 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043858_P001	Maize	vacuole	93.54	91.41
TraesCS3B01G300900.1	Wheat	plastid	82.95	84.47
TraesCS3D01G267700.1	Wheat	plastid	83.46	84.33
TraesCS3A01G267500.1	Wheat	plastid	83.46	84.33
Os01t0680200-01	Rice	cytosol, plasma membrane, vacuole	82.43	82.43
HORVU3Hr1G062690.1	Barley	plastid	82.95	80.25
EES18657	Sorghum	mitochondrion	62.79	70.43
OQU78406	Sorghum	plastid	64.86	68.02
VIT_18s0089g01410.t01	Wine grape	plasma membrane	41.86	47.09
CDY02338	Canola	plasma membrane	38.5	46.56
Solyc10g005160.1.1	Tomato	plasma membrane	42.64	46.22
PGSC0003DMT400086024	Potato	cytosol, endoplasmic reticulum, extracellular	16.8	46.1
Bra023141.1-P	Field mustard	plasma membrane	46.51	46.04
Bra023144.1-P	Field mustard	endoplasmic reticulum, peroxisome, plasma membrane	46.51	46.04
AT1G30840.1	Thale cress	peroxisome, plasma membrane, vacuole	44.7	45.29
CDY09527	Canola	plasma membrane	36.95	44.69
CDY09533	Canola	plasma membrane	36.69	44.38
PGSC0003DMT400090756	Potato	endoplasmic reticulum, extracellular, vacuole	16.28	43.75
KRH37148	Soybean	cytosol, peroxisome, plasma membrane	43.67	42.14
Solyc02g082170.1.1	Tomato	plasma membrane	44.7	42.09
Solyc10g005170.1.1	Tomato	cytosol, peroxisome, plasma membrane	43.15	41.96
KRH12149	Soybean	plasma membrane	43.67	41.83
KRH12150	Soybean	plasma membrane	38.5	41.62
PGSC0003DMT400090938	Potato	endoplasmic reticulum, extracellular	17.05	41.51
KRH37147	Soybean	nucleus, peroxisome, plasma membrane	43.67	41.32
Solyc10g005150.1.1	Tomato	plasma membrane	40.57	41.1
PGSC0003DMT400035529	Potato	cytosol, mitochondrion, peroxisome, plastid	44.19	40.33
KRH37149	Soybean	plasma membrane	41.34	39.31
KXG35809	Sorghum	plasma membrane	33.59	33.42
EER99038	Sorghum	plasma membrane	24.55	32.65
EER99040	Sorghum	plasma membrane	29.2	29.82
OQU93095	Sorghum	plasma membrane	27.65	28.31
EES11332	Sorghum	peroxisome	27.13	28.07
KXG26473	Sorghum	cytosol, peroxisome, plasma membrane	27.91	27.69
KXG24673	Sorghum	peroxisome	28.94	27.32
EES11334	Sorghum	peroxisome	26.61	27.03
EES10997	Sorghum	plasma membrane	27.39	25.42
OQU89926	Sorghum	mitochondrion, plasma membrane	26.1	24.94
KXG27004	Sorghum	golgi, peroxisome, vacuole	24.29	23.86
EES05697	Sorghum	plastid	26.1	20.16

Protein Annotations

MapMan:24.2.1.6	EntrezGene:8061868	UniProt:C5XGQ4	EnsemblPlants:EES01264	ProteinID:EES01264	ProteinID:EES01264.2
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003729	GO:GO:0005215	GO:GO:0005488
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	PFAM:PF16913
PANTHER:PTHR31376	PANTHER:PTHR31376:SF7	InterPro:PUP_plant	EnsemblPlantsGene:SORBI_3003G257400	SUPFAM:SSF103481	unigene:Sbi.1314
TMHMM:TMhelix	UniParc:UPI0009DC8E51	RefSeq:XP_002456144.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:+:59557217..59558392

Molecular Weight (calculated)

40202.7 Da

IEP (calculated)

9.317

GRAVY (calculated)

0.523

Length

387 amino acids

Sequence
(BLAST)

001: MPTTTPAPLL DMPAPSTDAT ATNNGVASRR RRRRLLLCAN YAALLGGSVA SSLLSRYYFA HGGCDRWVAT LVQSVGFPVL LVPVYAGRCR SASQSQPRPF
101: AWFTRRLLAA CVVIGVLMGV NNLLFSYSSS YLPVSTSSLL LSTQLAFTLV LAAVIVRHPL TFSNLNAVVL LTLSSVLLAL RSSDSAERPD GGSRARYFVG
201: FAVTLGAAGL FAAYLPVMEL VYRRAVSGGF RMAVEVQVIM QAAATALAVA GLAAAGGWRE ELARWDLSPA AYWAVVAALV ACFMGTAGMV YLTSSLHSGV
301: CMTAVLTANV IGGVVVFRDP FGWEKAVASV LCVWGFSSYL YGEYSSTQQA QEGDGKVAAA AGDGHKSVAS GGGGGVGGGG GGAVETV

Best Arabidopsis Sequence Match ( AT1G30840.1 )
(BLAST)

001: MSDGRVNADP QQEENMVKPP VKRSLTLLIV TYFFLFFGSI ASSLLAKYYF VYGGSSRWVS TWVQSAGFPL LLILIYFPHY VLKTTTRRPF TRFTLRHLIF
101: SVLIGLVLGF NNFLFSWGTS YLPVSTSSLL LSTQLVFTLI LSRIIVKQKI TFSNLNCVVL LTLSSVLLAL DSSKDKPSGL TKTKYFIGYV STIGAGLLFA
201: LYLPVTEKLY RTVYCYAMVM EVQLVMEFAA TVFATIGMAC EGGFKEMVKE ANHVFTKGPT FYWTFAILAN VVTWQLSFAA TSGMVYLTSG ITGGICMTAL
301: LAMNVIGGVV AYGDVFGGVK IVSTVLCIWG FSSYTYGMYM KMKKEEKEKG EYSGVKTTED SGEMEVEMGN VKDDVAAADD RA

Arabidopsis Description

PUP4Probable purine permease 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SY29]
SUBAcon: [peroxisome,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.