CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 3
plasma membrane 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EES01496
EES06576

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G41160.1	EES01496	AT5G46240.1	15299147
AT5G41160.1	EES06576	AT5G46240.1	15299147

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d051504_P001	Maize	golgi, peroxisome, plasma membrane	73.25	95.57
Os02t0689200-03	Rice	plasma membrane	63.07	82.08
TraesCS6A01G262900.1	Wheat	plasma membrane	62.67	80.51
TraesCS6B01G289900.1	Wheat	peroxisome	62.08	79.95
TraesCS6D01G243400.1	Wheat	golgi, peroxisome, plasma membrane	61.88	79.49
HORVU6Hr1G066740.2	Barley	golgi, mitochondrion	60.88	72.97
GSMUA_Achr5P12690_001	Banana	plasma membrane	47.9	68.77
EES11332	Sorghum	peroxisome	48.1	64.44
KRH00977	Soybean	endoplasmic reticulum, plasma membrane, vacuole	44.31	60.82
CDY12545	Canola	plasma membrane	35.33	59.4
KRH40250	Soybean	endoplasmic reticulum, plasma membrane, vacuole	42.91	59.39
CDY36342	Canola	endoplasmic reticulum, plasma membrane, vacuole	34.33	57.53
VIT_15s0021g00650.t01	Wine grape	plastid	43.11	56.84
AT1G44750.1	Thale cress	plasma membrane	42.71	56.46
Solyc01g088550.2.1	Tomato	plasma membrane	40.92	56.32
PGSC0003DMT400004320	Potato	plasma membrane	41.12	55.83
VIT_19s0014g00150.t01	Wine grape	plasma membrane	39.32	51.98
Bra037874.1-P	Field mustard	plasma membrane	34.33	51.5
KRH13483	Soybean	plasma membrane	31.34	51.14
CDY14989	Canola	plasma membrane	41.52	50.12
Bra036955.1-P	Field mustard	plasma membrane	41.32	49.88
AT4G08700.1	Thale cress	plasma membrane	35.93	49.86
CDX71327	Canola	plasma membrane	41.32	49.76
AT5G41160.1	Thale cress	plasma membrane	34.93	48.08
EES11334	Sorghum	peroxisome	36.53	48.03
CDY54350	Canola	plasma membrane	30.94	46.69
KXG27004	Sorghum	golgi, peroxisome, vacuole	36.13	45.94
CDX75141	Canola	plasma membrane	30.34	45.78
KRH21843	Soybean	mitochondrion	37.13	44.29
KXG26473	Sorghum	cytosol, peroxisome, plasma membrane	34.33	44.1
KXG24673	Sorghum	peroxisome	34.93	42.68
EES10997	Sorghum	plasma membrane	34.33	41.25
KXG35809	Sorghum	plasma membrane	23.35	30.08
EER99040	Sorghum	plasma membrane	22.16	29.29
EER99038	Sorghum	plasma membrane	16.97	29.21
OQU93095	Sorghum	plasma membrane	20.76	27.51
OQU78406	Sorghum	plastid	19.96	27.1
EES01264	Sorghum	plasma membrane	20.16	26.1
EES18657	Sorghum	mitochondrion	17.96	26.09
OQU89926	Sorghum	mitochondrion, plasma membrane	20.36	25.19

Protein Annotations

EnsemblPlants:EES05697	EnsemblPlantsGene:SORBI_3004G277000	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	InterPro:PUP_plant	PANTHER:PTHR31376	PANTHER:PTHR31376:SF31
PFAM:PF16913	ProteinID:EES05697	ProteinID:EES05697.2	SEG:seg	TMHMM:TMhelix	UniParc:UPI0007F224B7
UniProt:C5Y0T1	MapMan:24.2.1.6	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:62034208..62036524

Molecular Weight (calculated)

54130.1 Da

IEP (calculated)

9.925

GRAVY (calculated)

0.134

Length

501 amino acids

Sequence
(BLAST)

001: MSCDRERANG GARGHTTATR KGHAASASAS ARVHSKKSGV LDSWCPYTTR RKSSTSSRRQ ERAPLFQPSP PVRRSHAESL TNCACSSLPL SRPPQHSPEP
101: TRVGSRAGKG MAGDDGSIGS GSGGGGGGIR DREDEVHVQI AGSSKPETSS TNGTAPQNSH TRHWHWWLMV ALNIFFLVAG QTASTLLGRF YYNQGGNSKW
201: MSTFVQTAGF PVLFVALYLF RSKSPSTQTT TSNPETSVTK ITLIYIVLGL IIAADDLMYS YGLLYLPVST YSLICASQLA FNAVFSYVLN AQKFTALILN
301: SVILLTFSAA LLGVDEDSQG TNGLSRGKYI LGFTLTLGAS ATYSLILSLM QVTFEKVIKK ETFSVVLNMQ IYTALVATIA SLVGLFASGE WKTLEGEMHA
401: FSSGRLSYVM TLLWTAVSWQ IASVGVVGLI FVVSSLFSNV ISTLALPIIP VFAVIFFHDK MNGVKIIAML MAIWGFVSYG YQLYISDKKA RKTSVSVEEN
501: S

Best Arabidopsis Sequence Match ( AT1G44750.1 )
(BLAST)

001: MAKEPVRVLV TGAAGNQEPI LVKEESVVGI PTPLLKLKSW QWWVLVSVNI FFLIGGQAAS VLLGRFYYDE GGNSKWMATL VQTAAFPILY IPLLLLPSSA
101: SVESSESSCS LKYIVLIYVL LGVIIAGDNM LYSVGLLYLS ASTYSLICAT QLAFNAVFSY FINAQKFTAL ILNSVVLLSF SAALIALNDD ADTPSGVSRS
201: KYIVGFVCTL AASALYSLLL SLMQFSFEKI LKRETFSVVL EMQIYTSLVA TCVSVIGLFA SGEWRTLHGE MEGYHKGQAS YVLTLVWTAV TWQVCSVGVV
301: GLIFLVTSLF SNVISTLSLA VTPLAALVVF RDKMSGVKIM AMLIAIWGFA SYVYQNHIDD LKVRQARQQA QAGRVEPPC

Arabidopsis Description

PUP11Probable purine permease 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPF6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.