CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
cytosol 1
golgi 1
plastid 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G069920.5	Barley	cytosol	60.82	63.67
TraesCS5D01G254300.1	Wheat	cytosol, peroxisome, plasma membrane	68.04	55.0
TraesCS5A01G247800.1	Wheat	cytosol, peroxisome, plasma membrane	68.04	54.85
Os09t0467400-03	Rice	plasma membrane	67.35	54.29
HORVU5Hr1G069910.2	Barley	cytosol, peroxisome, plasma membrane	67.01	53.13
TraesCS5B01G245100.1	Wheat	plastid	68.73	48.08
EER99040	Sorghum	plasma membrane	60.48	46.44
GSMUA_Achr5P24450_001	Banana	plasma membrane	49.83	39.4
KXG35809	Sorghum	plasma membrane	47.42	35.48
GSMUA_Achr10P...	Banana	plasma membrane	52.92	31.36
OQU93095	Sorghum	plasma membrane	35.74	27.51
EES01264	Sorghum	plasma membrane	32.65	24.55
EES18657	Sorghum	mitochondrion	28.87	24.35
OQU78406	Sorghum	plastid	29.9	23.58
KXG26473	Sorghum	cytosol, peroxisome, plasma membrane	31.27	23.33
EES11334	Sorghum	peroxisome	29.9	22.83
KXG24673	Sorghum	peroxisome	30.93	21.95
EES11332	Sorghum	peroxisome	27.49	21.39
OQU89926	Sorghum	mitochondrion, plasma membrane	28.87	20.74
EES10997	Sorghum	plasma membrane	28.52	19.9
KXG27004	Sorghum	golgi, peroxisome, vacuole	26.12	19.29
EES05697	Sorghum	plastid	29.21	16.97

Protein Annotations

EnsemblPlants:EER99038	EnsemblPlantsGene:SORBI_3002G232100	EntrezGene:8063731	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	InterPro:PUP_plant	PANTHER:PTHR31376
PANTHER:PTHR31376:SF1	PFAM:PF16913	ProteinID:EER99038	ProteinID:EER99038.1	RefSeq:XP_002462517.1	SEG:seg
SUPFAM:SSF103481	TMHMM:TMhelix	UniParc:UPI0001A841F9	UniProt:C5X307	MapMan:24.2.1.6	:

Description

hypothetical protein

Coordinates

chr2:-:62316761..62318237

Molecular Weight (calculated)

30956.6 Da

IEP (calculated)

9.837

GRAVY (calculated)

0.576

Length

291 amino acids

Sequence
(BLAST)

001: MDVEAARKDD LTPPTPPTPR RGKGKVMHRL LVALNCGMLA LGTTAGPLLV RLYYDKGGQR EWLSACLQSV GWPLLLIPVA ASYAARRARD KRGGPVPVLL
101: TPPRVLLAAA GLGVATGADN YIYAYSLRYL PVSTSAILIS TQLAFTVLFA FLIVRQRLTP ATVNAVALLT VGAAVLGLHV SSDRPRGVAR AKYLLGFALA
201: LGAAALYGLI LPLVELAYRR AAAAGGGRAV TYALVMEMQL VMGFFATAFC TVGMTIDKDF QVCVPYVHLL VAYVSLLDSP CELVAACLER P

Best Arabidopsis Sequence Match ( AT1G28220.1 )
(BLAST)

001: MVKALVIINC IILAIGNCGG PLIMRLYFNN GGKRIWFSTF LETAGFPVIF IPLLFSYITR RRSNNVGDST SFFLIKPRLL IAAVIVGILS GFDNYLYAYG
101: IAYLPVSTAA LIIASQLAFI AIFSFFMVKH KFTPFTINAV VLLTVGAAVL GMHTETDKPV HETHKQYITG FLITVAAAVM YAFILPLVEL AYQKAKQTMS
201: YTLVLEFQLI LCLLASIVSV IGMFIAGDFK ALPKEAREFK LGEALFYVVA VFSAIIWQGF FLGAIGLIFS TSSLVSGIMI SVLLPITEVL AVIFYHEKFQ
301: AEKGLSLALS LWGFVSYFYG EIKSGEDKRR IQQEESQETE QSSLSRPISE C

Arabidopsis Description

PUP3Purine permease 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ95]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.