Factsheet for TraesCS5D01G254300.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G247800.1	Wheat	cytosol, peroxisome, plasma membrane	98.33	98.06
TraesCS5B01G245100.1	Wheat	plastid	98.33	85.1
Zm00001d005934_P002	Maize	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	81.94	81.72
HORVU5Hr1G069920.5	Barley	cytosol	61.11	79.14
Os09t0467400-03	Rice	plasma membrane	77.78	77.56
Zm00001d005935_P001	Maize	plasma membrane	55.83	71.53
HORVU5Hr1G069910.2	Barley	cytosol, peroxisome, plasma membrane	71.39	70.03
EER99040	Sorghum	plasma membrane	73.61	69.92
EER99038	Sorghum	plasma membrane	55.0	68.04
GSMUA_Achr5P24450_001	Banana	plasma membrane	63.61	62.23
TraesCS5D01G254100.1	Wheat	plasma membrane	56.39	53.85
TraesCS5D01G437200.1	Wheat	plasma membrane	54.17	50.52
GSMUA_Achr10P...	Banana	plasma membrane	65.0	47.66
TraesCS5D01G254200.2	Wheat	plasma membrane	50.56	44.39
Zm00001d020781_P003	Maize	plasma membrane	80.28	43.99
TraesCS4D01G302100.1	Wheat	plastid	44.44	41.24
TraesCS4D01G302200.1	Wheat	plastid	44.17	40.98
TraesCS4D01G302000.1	Wheat	plastid	44.17	40.36
TraesCS6D01G243400.1	Wheat	golgi, peroxisome, plasma membrane	31.67	29.23
TraesCS2D01G452400.1	Wheat	peroxisome	30.28	29.14
TraesCS3D01G267700.1	Wheat	plastid	30.83	28.98
TraesCS1D01G394000.1	Wheat	plastid	30.28	28.76
TraesCS2D01G452100.1	Wheat	plasma membrane	31.11	28.57
TraesCS5D01G367700.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	32.5	27.92
TraesCS1D01G393900.1	Wheat	plastid	30.0	27.41
TraesCS1D01G394100.1	Wheat	plastid	30.56	27.23
TraesCS2D01G452200.1	Wheat	plasma membrane	28.61	27.03
TraesCS2D01G452300.1	Wheat	peroxisome	28.06	26.37

Protein Annotations

EnsemblPlants:TraesCS5D01G254300.1	EnsemblPlantsGene:TraesCS5D01G254300	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	InterPro:PUP_plant	PANTHER:PTHR31376	PANTHER:PTHR31376:SF1
PFAM:PF16913	SEG:seg	SUPFAM:SSF103481	TMHMM:TMhelix	MapMan:24.2.1.6	:

Description

No Description!

Coordinates

chr5D:-:360970345..360972819

Molecular Weight (calculated)

38585.5 Da

IEP (calculated)

9.374

GRAVY (calculated)

0.649

Length

360 amino acids

Sequence
(BLAST)

001: MDVEAPKDSD QRPAPPARGK AMQRFLVALN CGMLTLGTTG GPLLSRLYFS KGGHRKWLSA WLETGGWPLL LLPVAASYLS RRAHDPSAPV VLTPPRILLA
101: AAGLGLATGA DDFLYAYGLS FVPVSTSAIL ISTQLAFTVF FAFLIVRQRL TALSVNAVAL LTVGAVVLGL HVSSDRPAGV SKGQYWLGFL LTLAAAALYG
201: LVLPLIELTY KRAAGGGRVV TYALVMEMQL VMGFFATAFC TVGMIVNNDF QAISREAQAF ELGEARYYTV LVWSAILWQF FFLGAVGVIF CVHTLFAGIL
301: IAVFIPVTEV LAVIFLHEKF TSEKGVALAL SLWGLASYSY GEYSDAKAAK KKAALDAQAS

Best Arabidopsis Sequence Match ( AT1G28230.1 )
(BLAST)

001: MKNGLIIINC IILTIGTCGG PLLTRLYFTN GGKRIWFMSF LSTAGFPIIL IPLLVSFLSR RRSNRNPNNA ENKRKTKLFL METPLFIASI VIGLLTGLDN
101: YLYSYGLAYL PVSTSSLIIG TQLAFNALFA FLLVKQKFTP FSINAVVLLT VGIGILALHS DGDKPAKESK KEYVVGFLMT VVAALLYAFI LPLVELTYKK
201: ARQEITFPLV LEIQMVMCLA ATFFCVIGMF IVGDFKVIAR EAREFKIGGS VFYYALIVIT GIIWQGFFLG AIGIVFCASS LASGVLISVL LPVTEVFAVV
301: CFREKFQAEK GVSLLLSLWG FVSYFYGEFK SGKKVVDKPQ PPETELPILP VSDYVA

Arabidopsis Description

PUP1Purine permease 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ96]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.