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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • peroxisome 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:peroxisome, plasma membrane, plastid
MultiLoc:peroxisome
PProwler:secretory
TargetP:plastid
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS3A01G132400.1
TraesCS3A01G294200.1
TraesCS3B01G167100.1
TraesCS3B01G328800.1
TraesCS3D01G148600.1
TraesCS3D01G294000.1
TraesCS6A01G160500.1
TraesCS6B01G190900.1
TraesCS6D01G152200.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G41160.1 TraesCS3A01G132400.1 AT5G46240.1 15299147
AT5G41160.1 TraesCS3A01G294200.1 AT5G46240.1 15299147
AT5G41160.1 TraesCS3B01G167100.1 AT5G46240.1 15299147
AT5G41160.1 TraesCS3B01G328800.1 AT5G46240.1 15299147
AT5G41160.1 TraesCS3D01G148600.1 AT5G46240.1 15299147
AT5G41160.1 TraesCS3D01G294000.1 AT5G46240.1 15299147
AT5G41160.1 TraesCS6A01G160500.1 AT5G46240.1 15299147
AT5G41160.1 TraesCS6B01G190900.1 AT5G46240.1 15299147
AT5G41160.1 TraesCS6D01G152200.1 AT5G46240.1 15299147
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2B01G474100.1 Wheat peroxisome 99.73 99.73
TraesCS5A01G413800.1 Wheat peroxisome 98.93 98.93
TraesCS2A01G452600.1 Wheat peroxisome 96.79 96.79
HORVU2Hr1G105300.1 Barley peroxisome 96.26 96.26
Zm00001d002515_P001 Maize peroxisome 68.98 69.35
EES11332 Sorghum peroxisome 68.72 68.72
HORVU5Hr1G019740.1 Barley cytosol, plastid 54.81 61.56
TraesCS6D01G243400.1 Wheat golgi, peroxisome, plasma membrane 61.76 59.23
GSMUA_Achr5P12690_001 Banana plasma membrane 54.01 57.88
KRH00977 Soybean endoplasmic reticulum, plasma membrane, vacuole 52.94 54.25
KRH40250 Soybean endoplasmic reticulum, plasma membrane, vacuole 52.41 54.14
CDY12545 Canola plasma membrane 42.78 53.69
CDY36342 Canola endoplasmic reticulum, plasma membrane, vacuole 42.51 53.18
AT1G44750.1 Thale cress plasma membrane 51.07 50.4
VIT_15s0021g00650.t01 Wine grape plastid 50.27 49.47
PGSC0003DMT400004320 Potato plasma membrane 48.4 49.05
Solyc01g088550.2.1 Tomato plasma membrane 47.59 48.9
Bra037874.1-P Field mustard plasma membrane 41.98 47.01
AT4G08700.1 Thale cress plasma membrane 45.19 46.81
TraesCS2D01G452200.1 Wheat plasma membrane 47.33 46.46
VIT_19s0014g00150.t01 Wine grape plasma membrane 47.06 46.44
KRH13483 Soybean plasma membrane 37.7 45.93
TraesCS2D01G452300.1 Wheat peroxisome 46.79 45.69
Bra036955.1-P Field mustard plasma membrane 50.27 45.3
CDY14989 Canola plasma membrane 50.0 45.06
AT5G41160.1 Thale cress plasma membrane 43.58 44.78
CDX71327 Canola plasma membrane 49.73 44.71
TraesCS2D01G452100.1 Wheat plasma membrane 45.45 43.37
CDY54350 Canola plasma membrane 38.24 43.07
CDX75141 Canola plasma membrane 37.17 41.87
KRH21843 Soybean mitochondrion 45.45 40.48
TraesCS5D01G254300.1 Wheat cytosol, peroxisome, plasma membrane 29.14 30.28
TraesCS5D01G254100.1 Wheat plasma membrane 29.68 29.44
TraesCS4D01G302200.1 Wheat plastid 28.88 27.84
TraesCS5D01G437200.1 Wheat plasma membrane 28.34 27.46
TraesCS5D01G254200.2 Wheat plasma membrane 29.68 27.07
TraesCS4D01G302100.1 Wheat plastid 27.27 26.29
TraesCS4D01G302000.1 Wheat plastid 27.01 25.63
TraesCS3D01G267700.1 Wheat plastid 25.67 25.07
TraesCS5D01G367700.1 Wheat cytosol, endoplasmic reticulum, peroxisome 26.74 23.87
TraesCS1D01G394000.1 Wheat plastid 23.8 23.48
TraesCS1D01G393900.1 Wheat plastid 24.6 23.35
TraesCS1D01G394100.1 Wheat plastid 23.53 21.78
Protein Annotations
EnsemblPlants:TraesCS2D01G452400.1EnsemblPlantsGene:TraesCS2D01G452400GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0016021InterPro:PUP_plantPANTHER:PTHR31376PANTHER:PTHR31376:SF2
PFAM:PF16913SEG:segTMHMM:TMhelixMapMan:24.2.1.6::
Description
No Description!
Coordinates
chr2D:-:561912165..561913575
Molecular Weight (calculated)
40175.1 Da
IEP (calculated)
7.053
GRAVY (calculated)
0.534
Length
374 amino acids
Sequence
(BLAST)
001: MADASAGNNA GSTSSAEVQI QIPAGPPKAE PGAPSKNSGA KNWRWWMMVS VDVFFVVAGQ TSATLLGRYY YHQGGSSKWI STFVQTAGFP ILFLALLCFP
101: KSSGGGGASG DAPVAKVAVI YVVLGLVIAA DDMMYASGLK YLPVSTYSLI CASQLAFNVV FSYVLNSQKL TGLIFNAVIL LTLSDALLGV NHDETEDMSG
201: MPRGKYLMGF LLTLGASGTY SLILSLMQLT FENVIKKHTY TAVLNMQIYT ALVATVASMV GLFASGEWRM MTEEMDTFRS GQFSYFMTLV WTAVSWQITS
301: VGVVGLVFEV SSLFSNVIST VSLPIVPLFA VLIFHDTMDG IKIIAMLIAA WGFVSYLMQH FIDDKKARKA AAGG
Best Arabidopsis Sequence Match ( AT1G44750.1 )
(BLAST)
001: MAKEPVRVLV TGAAGNQEPI LVKEESVVGI PTPLLKLKSW QWWVLVSVNI FFLIGGQAAS VLLGRFYYDE GGNSKWMATL VQTAAFPILY IPLLLLPSSA
101: SVESSESSCS LKYIVLIYVL LGVIIAGDNM LYSVGLLYLS ASTYSLICAT QLAFNAVFSY FINAQKFTAL ILNSVVLLSF SAALIALNDD ADTPSGVSRS
201: KYIVGFVCTL AASALYSLLL SLMQFSFEKI LKRETFSVVL EMQIYTSLVA TCVSVIGLFA SGEWRTLHGE MEGYHKGQAS YVLTLVWTAV TWQVCSVGVV
301: GLIFLVTSLF SNVISTLSLA VTPLAALVVF RDKMSGVKIM AMLIAIWGFA SYVYQNHIDD LKVRQARQQA QAGRVEPPC
Arabidopsis Description
PUP11Probable purine permease 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPF6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.