Factsheet for TraesCS4D01G302000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
endoplasmic reticulum 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G404100.1	Wheat	plastid	98.22	98.47
TraesCS4B01G303700.1	Wheat	plastid	95.43	96.16
HORVU4Hr1G078220.1	Barley	endoplasmic reticulum, plasma membrane	65.99	95.59
TraesCS4D01G302100.1	Wheat	plastid	91.88	93.3
TraesCS4D01G302200.1	Wheat	plastid	85.03	86.34
Zm00001d027979_P001	Maize	plasma membrane	66.24	83.65
Zm00001d048232_P001	Maize	plastid	77.41	81.12
Zm00001d027978_P001	Maize	plastid	78.93	80.36
Os03t0187800-01	Rice	plastid	79.7	78.7
OQU93095	Sorghum	plasma membrane	58.63	61.11
TraesCS5D01G254300.1	Wheat	cytosol, peroxisome, plasma membrane	40.36	44.17
TraesCS5D01G254100.1	Wheat	plasma membrane	40.86	42.71
TraesCS5D01G437200.1	Wheat	plasma membrane	41.12	41.97
TraesCS5D01G254200.2	Wheat	plasma membrane	39.09	37.56
Solyc12g057090.1.1	Tomato	plasma membrane	27.92	37.04
Solyc12g057100.1.1	Tomato	cytosol, golgi, plasma membrane	33.25	36.19
VIT_18s0001g06300.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	28.93	36.08
PGSC0003DMT400045771	Potato	endoplasmic reticulum, extracellular, plasma membrane	15.23	35.29
PGSC0003DMT400045772	Potato	cytosol, peroxisome, vacuole	26.65	33.02
TraesCS2D01G452300.1	Wheat	peroxisome	28.43	29.24
TraesCS3D01G267700.1	Wheat	plastid	28.17	28.98
TraesCS2D01G452200.1	Wheat	plasma membrane	27.41	28.35
TraesCS1D01G394100.1	Wheat	plastid	28.17	27.48
TraesCS2D01G452100.1	Wheat	plasma membrane	27.16	27.3
TraesCS1D01G393900.1	Wheat	plastid	27.16	27.16
TraesCS2D01G452400.1	Wheat	peroxisome	25.63	27.01
TraesCS1D01G394000.1	Wheat	plastid	25.38	26.39
TraesCS5D01G367700.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	27.92	26.25
TraesCS6D01G243400.1	Wheat	golgi, peroxisome, plasma membrane	25.38	25.64

Protein Annotations

EnsemblPlants:TraesCS4D01G302000.1	EnsemblPlantsGene:TraesCS4D01G302000	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	InterPro:PUP_plant	ncoils:Coil	PANTHER:PTHR31376
PANTHER:PTHR31376:SF6	PFAM:PF16913	SEG:seg	TMHMM:TMhelix	MapMan:24.2.1.6	:

Description

No Description!

Coordinates

chr4D:-:470120661..470121845

Molecular Weight (calculated)

41318.3 Da

IEP (calculated)

9.722

GRAVY (calculated)

0.626

Length

394 amino acids

Sequence
(BLAST)

001: MATLTASASS AMQEAAKTPT ASPPRATAAS TASPARYRPS PLVIFSACLV LIGAGGPLLL RVYFVHGGQR LWLSALLQIS GWPLLLPPLC VSLFRGRRHG
101: IANLLLPPRL VVAAAVLGGF YAVSCYVYAM GSQALPLSTS SLLLATQLAF TAVFAFLFVG LRFTPFSANA VLLLIIGPAV LGVGPGAGKP AGVTSKAYWT
201: GFCEGIAAAA LAGLVLPLVE VAMERYGRRT GPAARTPPPY STVMQMQAVM GAAGTIVCLL GMAIKSDFGA LRSEAAAFGL GKTNYYLVLV WDAVSWQLLN
301: LGIMGLITCA SSLLAGIMIA VLLPLSQILA VMFLHEKFDG PKGIALVLSL WGFASYMYGE KVQQKKLEAQ KSELQQQQQQ QVGSETGDLE LAAP

Best Arabidopsis Sequence Match ( AT1G28220.1 )
(BLAST)

001: MVKALVIINC IILAIGNCGG PLIMRLYFNN GGKRIWFSTF LETAGFPVIF IPLLFSYITR RRSNNVGDST SFFLIKPRLL IAAVIVGILS GFDNYLYAYG
101: IAYLPVSTAA LIIASQLAFI AIFSFFMVKH KFTPFTINAV VLLTVGAAVL GMHTETDKPV HETHKQYITG FLITVAAAVM YAFILPLVEL AYQKAKQTMS
201: YTLVLEFQLI LCLLASIVSV IGMFIAGDFK ALPKEAREFK LGEALFYVVA VFSAIIWQGF FLGAIGLIFS TSSLVSGIMI SVLLPITEVL AVIFYHEKFQ
301: AEKGLSLALS LWGFVSYFYG EIKSGEDKRR IQQEESQETE QSSLSRPISE C

Arabidopsis Description

PUP3Purine permease 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ95]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.