Factsheet for VIT_18s0001g06300.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol, plasma membrane

Predictor Summary:

nucleus 1
mitochondrion 1
endoplasmic reticulum 2
plasma membrane 3
extracellular 1
vacuole 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400045771	Potato	endoplasmic reticulum, extracellular, plasma membrane	27.53	51.18
Solyc12g057100.1.1	Tomato	cytosol, golgi, plasma membrane	52.85	46.13
Solyc12g057090.1.1	Tomato	plasma membrane	41.77	44.44
VIT_18s0001g06910.t01	Wine grape	plasma membrane	42.41	38.18
PGSC0003DMT400045772	Potato	cytosol, peroxisome, vacuole	38.29	38.05
VIT_18s0001g06950.t01	Wine grape	plasma membrane	41.77	37.82
VIT_18s0001g06940.t01	Wine grape	endoplasmic reticulum, plasma membrane	41.77	37.61
Zm00001d048232_P001	Maize	plastid	36.08	30.32
Zm00001d027978_P001	Maize	plastid	37.03	30.23
Zm00001d027979_P001	Maize	plasma membrane	29.75	30.13
TraesCS4B01G303700.1	Wheat	plastid	36.39	29.41
TraesCS4B01G304200.1	Wheat	plastid	36.08	29.38
Os03t0187800-01	Rice	plastid	37.03	29.32
TraesCS4A01G404400.1	Wheat	plastid	36.08	29.23
TraesCS4B01G303600.1	Wheat	plasma membrane	29.11	29.21
TraesCS4D01G302200.1	Wheat	plastid	35.76	29.12
TraesCS4D01G302100.1	Wheat	plastid	35.76	29.12
OQU93095	Sorghum	plasma membrane	34.81	29.1
HORVU4Hr1G078220.1	Barley	endoplasmic reticulum, plasma membrane	25.0	29.04
TraesCS4A01G404100.1	Wheat	plastid	36.08	29.01
HORVU4Hr1G078210.1	Barley	plastid	35.76	28.97
TraesCS4D01G302000.1	Wheat	plastid	36.08	28.93
TraesCS4A01G404200.1	Wheat	plastid	35.76	28.9
TraesCS4A01G404300.1	Wheat	plastid	35.44	28.64
TraesCS4B01G303900.1	Wheat	plastid	35.44	28.64
VIT_18s0089g01410.t01	Wine grape	plasma membrane	29.75	27.33
VIT_10s0003g02850.t01	Wine grape	plasma membrane	27.85	23.78
VIT_02s0012g00730.t01	Wine grape	plasma membrane	28.8	23.39
VIT_19s0014g00150.t01	Wine grape	plasma membrane	27.85	23.22
VIT_11s0016g00010.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	25.63	22.88
VIT_15s0021g00650.t01	Wine grape	plastid	25.63	21.32
VIT_10s0003g02840.t01	Wine grape	plasma membrane	25.63	18.37
TraesCS4B01G304100.1	Wheat	extracellular	7.59	16.9

Protein Annotations

MapMan:24.2.1.6	ProteinID:CBI19192	ProteinID:CBI19192.3	UniProt:E0CRN8	EMBL:FN595227	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
PFAM:PF16913	PANTHER:PTHR31376	PANTHER:PTHR31376:SF8	InterPro:PUP_plant	TMHMM:TMhelix	UniParc:UPI00015C7D88
ArrayExpress:VIT_18s0001g06300	EnsemblPlantsGene:VIT_18s0001g06300	EnsemblPlants:VIT_18s0001g06300.t01	RefSeq:XP_003634477	RefSeq:XP_003634477.1	SEG:seg

Description

No Description!

Coordinates

chr18:+:4728333..4729667

Molecular Weight (calculated)

34528.9 Da

IEP (calculated)

9.436

GRAVY (calculated)

0.516

Length

316 amino acids

Sequence
(BLAST)

001: MESSQGSQNE ATQRQRRKSL KAMFLVLVNC VLMTIGQVGG PLLLRIYYLH GGKRKWLNAW LLTSGFPILI LPMAFSYLRA QAKGQATVLL VTPRLVAASA
101: FLGILLGLDG YLYSFGLSYL PISVSSLLGS TQLAFTAIFA FIVVKHKFTH YSVNAVVLMT FGSIVLGLHM NGDRPSGVSD GKYLLGFLMT LGAAALHGFI
201: MPALEYTHLK AGMPITFDLV MQIQFLISMF ATLFCTIPMV INKDFQAVSK EAAEYGLGET KYYMVSIGSS SNAVADHRKY WSDLLLHVPP GRSCVISSSS
301: CPAGFCCTFL AREIQC

Best Arabidopsis Sequence Match ( AT1G28220.1 )
(BLAST)

001: MVKALVIINC IILAIGNCGG PLIMRLYFNN GGKRIWFSTF LETAGFPVIF IPLLFSYITR RRSNNVGDST SFFLIKPRLL IAAVIVGILS GFDNYLYAYG
101: IAYLPVSTAA LIIASQLAFI AIFSFFMVKH KFTPFTINAV VLLTVGAAVL GMHTETDKPV HETHKQYITG FLITVAAAVM YAFILPLVEL AYQKAKQTMS
201: YTLVLEFQLI LCLLASIVSV IGMFIAGDFK ALPKEAREFK LGEALFYVVA VFSAIIWQGF FLGAIGLIFS TSSLVSGIMI SVLLPITEVL AVIFYHEKFQ
301: AEKGLSLALS LWGFVSYFYG EIKSGEDKRR IQQEESQETE QSSLSRPISE C

Arabidopsis Description

PUP3Purine permease 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ95]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.