Factsheet for TraesCS4B01G304100.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 1
extracellular 5
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
iPSORT:	plastid
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G078220.1	Barley	endoplasmic reticulum, plasma membrane	90.85	47.43
TraesCS4B01G303600.1	Wheat	plasma membrane	89.44	40.32
Zm00001d027979_P001	Maize	plasma membrane	80.28	36.54
TraesCS4B01G303900.1	Wheat	plastid	99.3	36.06
TraesCS4D01G302100.1	Wheat	plastid	95.07	34.79
TraesCS4A01G404200.1	Wheat	plastid	93.66	34.02
TraesCS4B01G303700.1	Wheat	plastid	89.44	32.48
TraesCS4B01G304200.1	Wheat	plastid	88.03	32.22
Zm00001d048232_P001	Maize	plastid	81.69	30.85
Zm00001d027978_P001	Maize	plastid	80.28	29.46
Os03t0187800-01	Rice	plastid	76.76	27.32
OQU93095	Sorghum	plasma membrane	59.86	22.49
PGSC0003DMT400045771	Potato	endoplasmic reticulum, extracellular, plasma membrane	21.13	17.65
Solyc12g057090.1.1	Tomato	plasma membrane	35.92	17.17
PGSC0003DMT400045772	Potato	cytosol, peroxisome, vacuole	35.21	15.72
TraesCS5B01G431200.2	Wheat	plasma membrane	42.25	15.58
TraesCS5B01G244800.1	Wheat	plasma membrane	40.85	15.38
TraesCS5B01G245100.1	Wheat	plastid	44.37	15.14
TraesCS2B01G617100.1	Wheat	plasma membrane	36.62	14.33
Solyc12g057100.1.1	Tomato	cytosol, golgi, plasma membrane	35.92	14.09
TraesCS5B01G244900.1	Wheat	plasma membrane	33.8	12.66
TraesCS2B01G473900.1	Wheat	plasma membrane	30.99	11.55
TraesCS2B01G473800.1	Wheat	endoplasmic reticulum, extracellular, vacuole	25.35	10.43
TraesCS2B01G474100.1	Wheat	peroxisome	27.46	10.43
TraesCS2B01G474000.1	Wheat	cytosol, peroxisome, plasma membrane	31.69	10.07
TraesCS6B01G289900.1	Wheat	peroxisome	27.46	10.03
TraesCS3B01G300900.1	Wheat	plastid	26.76	10.0
TraesCS5B01G361100.2	Wheat	cytosol, endoplasmic reticulum, plastid	28.87	9.95
TraesCS1B01G413400.1	Wheat	plastid	26.06	9.76
TraesCS1B01G413500.1	Wheat	plastid	27.46	9.65
TraesCS1B01G413300.1	Wheat	mitochondrion	24.65	8.29
VIT_18s0001g06300.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	16.9	7.59
TraesCS5B01G245000.1	Wheat	plasma membrane	6.34	3.24

Protein Annotations

EnsemblPlants:TraesCS4B01G304100.1	EnsemblPlantsGene:TraesCS4B01G304100	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	InterPro:PUP_plant	PANTHER:PTHR31376	PANTHER:PTHR31376:SF6
PFAM:PF16913	SEG:seg	TMHMM:TMhelix	MapMan:24.2.1.6	:	:

Description

No Description!

Coordinates

chr4B:-:592186731..592187300

Molecular Weight (calculated)

15283.1 Da

IEP (calculated)

7.250

GRAVY (calculated)

0.573

Length

142 amino acids

Sequence
(BLAST)

001: MGAAGTMVCL LGMAIKSDFG VLRSEAATFG LGETNYYLVL VWDAVSWQLL NLGIMGLITC ASSLLAGIMI AVLLPLSEIL AVLFLHEKFD GPKGIALVLS
101: LWGFASYMYG EKVQQKKAAA QKNQLLQQQM ARKTGDLELA TP

Best Arabidopsis Sequence Match ( AT2G33750.2 )
(BLAST)

001: MKMKTVLVII NCIFLAIGNC GGPLMMRLYF QNGGERIWFP SFLQTVGCPL IFFPLLLSFL RRRRCLEEQE TTPFFLMKPP LFIAAIVVGL LVGFDNYLYS
101: YGLAYIPVST ASLIISAQLG FTALFAFFMV KQKFTPFTIN AIVLLTGGAV VLALNSDSDK LANETHKEYV VGFIMTLGAA LLYGFILPLV ELSYKKSGQR
201: ITYTLALEFQ MVLCFAATCV CLVGMLAAGD FKVIAGEARD FKLGESLYYV VIVFTAIIWQ AFFVGAIGLI FCASSLVSGI MVSALLPVTV ILAVICFQEK
301: FQAGKGVALA LSLWGSVSYF YGQVKSEEKT KAQDTQLSQL PVTDYVA

Arabidopsis Description

PUP2Purine permease 2 [Source:UniProtKB/Swiss-Prot;Acc:Q94GB1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.