Factsheet for TraesCS1B01G413300.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G393900.1	Wheat	plastid	88.63	94.92
TraesCS1A01G385800.1	Wheat	plastid	88.39	92.33
HORVU1Hr1G085120.1	Barley	plastid	86.26	91.0
TraesCS1B01G413500.1	Wheat	plastid	82.94	86.63
TraesCS1B01G413400.1	Wheat	plastid	76.3	84.96
EES18657	Sorghum	mitochondrion	62.32	76.23
Zm00001d038965_P001	Maize	mitochondrion, plastid	64.93	74.86
Os05t0556800-01	Rice	mitochondrion	67.06	73.89
OQU78406	Sorghum	plastid	64.45	73.71
TraesCS3B01G300900.1	Wheat	plastid	57.35	63.68
PGSC0003DMT400086024	Potato	cytosol, endoplasmic reticulum, extracellular	15.17	45.39
Solyc10g005160.1.1	Tomato	plasma membrane	36.97	43.7
VIT_18s0089g01410.t01	Wine grape	plasma membrane	35.55	43.6
PGSC0003DMT400090756	Potato	endoplasmic reticulum, extracellular, vacuole	14.69	43.06
Bra023141.1-P	Field mustard	plasma membrane	39.81	42.97
Bra023144.1-P	Field mustard	endoplasmic reticulum, peroxisome, plasma membrane	39.81	42.97
CDY02338	Canola	plasma membrane	32.46	42.81
AT1G30840.1	Thale cress	peroxisome, plasma membrane, vacuole	38.39	42.41
CDY09527	Canola	plasma membrane	31.52	41.56
Solyc10g005150.1.1	Tomato	plasma membrane	37.2	41.1
CDY09533	Canola	plasma membrane	31.04	40.94
PGSC0003DMT400090938	Potato	endoplasmic reticulum, extracellular	15.4	40.88
Solyc10g005170.1.1	Tomato	cytosol, peroxisome, plasma membrane	37.91	40.2
KRH12150	Soybean	plasma membrane	32.94	38.83
KRH37148	Soybean	cytosol, peroxisome, plasma membrane	36.49	38.4
Solyc02g082170.1.1	Tomato	plasma membrane	36.97	37.96
KRH12149	Soybean	plasma membrane	36.26	37.87
KRH37149	Soybean	plasma membrane	36.02	37.35
KRH37147	Soybean	nucleus, peroxisome, plasma membrane	36.02	37.16
PGSC0003DMT400035529	Potato	cytosol, mitochondrion, peroxisome, plastid	36.97	36.79
TraesCS5B01G244800.1	Wheat	plasma membrane	28.2	31.57
TraesCS2B01G617100.1	Wheat	plasma membrane	26.3	30.58
TraesCS5B01G245000.1	Wheat	plasma membrane	20.14	30.58
TraesCS5B01G431200.2	Wheat	plasma membrane	27.73	30.39
TraesCS4B01G303600.1	Wheat	plasma membrane	21.8	29.21
TraesCS5B01G244900.1	Wheat	plasma membrane	26.07	29.02
TraesCS2B01G473800.1	Wheat	endoplasmic reticulum, extracellular, vacuole	22.75	27.83
TraesCS4B01G303700.1	Wheat	plastid	24.64	26.6
TraesCS4B01G304200.1	Wheat	plastid	24.17	26.29
TraesCS5B01G245100.1	Wheat	plastid	25.83	26.2
TraesCS4B01G303900.1	Wheat	plastid	24.17	26.09
TraesCS2B01G473900.1	Wheat	plasma membrane	22.27	24.67
TraesCS4B01G304100.1	Wheat	extracellular	8.29	24.65
TraesCS2B01G474100.1	Wheat	peroxisome	21.56	24.33
TraesCS5B01G361100.2	Wheat	cytosol, endoplasmic reticulum, plastid	23.7	24.27
TraesCS6B01G289900.1	Wheat	peroxisome	20.85	22.62
TraesCS2B01G474000.1	Wheat	cytosol, peroxisome, plasma membrane	22.51	21.25
GSMUA_Achr10P...	Banana	cytosol, extracellular, golgi	2.37	8.55

Protein Annotations

EnsemblPlants:TraesCS1B01G413300.1	EnsemblPlantsGene:TraesCS1B01G413300	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	InterPro:MFS_trans_sf	InterPro:PUP_plant	PANTHER:PTHR31376
PANTHER:PTHR31376:SF7	PFAM:PF16913	SEG:seg	SUPFAM:SSF103473	SUPFAM:SSF103481	TMHMM:TMhelix
MapMan:24.2.1.6	:	:	:	:	:

Description

No Description!

Coordinates

chr1B:-:638782716..638783984

Molecular Weight (calculated)

44618.7 Da

IEP (calculated)

9.483

GRAVY (calculated)

0.564

Length

422 amino acids

Sequence
(BLAST)

001: MSILYLLASG RQPQNRPAAT RYTYMPPTHK PRRPSPSPSP SIVAYYSLPL TTASIERAAM AISSAPVPPR RRRSAVLLMV NYAALLVGSV ASSLLSRFYF
101: AHGGQNKWVV TLVQSAGFPT LVVAVLLAGR PASVPRPFLW FSRRFLAVCL VIGGLMGVNN LLFSYSSSLL PVSTSSLLLS TQLAFTLVLA VAIVRHPLTF
201: VNLNAVVLMT LCSVLLALRS GDAGESPDRK GYIIGFVVTL GAAGLFSAYL PVMELLYREA VSGGFILAVE VQAVMQAMAS VLAAIGLAAT GGFANDVAHW
301: KGSTAVYWVV VATLVVTWQA CFMGTAGVIY LTSSLHSGVC MAAVLTANVI GGVVVFGDPF GAEKAVATAL CVWGLSSYLY GEYTKIKKKA DDDQDEDTTL
401: PGARDDGESL HKSLTAAAAE TV

Best Arabidopsis Sequence Match ( AT1G30840.1 )
(BLAST)

001: MSDGRVNADP QQEENMVKPP VKRSLTLLIV TYFFLFFGSI ASSLLAKYYF VYGGSSRWVS TWVQSAGFPL LLILIYFPHY VLKTTTRRPF TRFTLRHLIF
101: SVLIGLVLGF NNFLFSWGTS YLPVSTSSLL LSTQLVFTLI LSRIIVKQKI TFSNLNCVVL LTLSSVLLAL DSSKDKPSGL TKTKYFIGYV STIGAGLLFA
201: LYLPVTEKLY RTVYCYAMVM EVQLVMEFAA TVFATIGMAC EGGFKEMVKE ANHVFTKGPT FYWTFAILAN VVTWQLSFAA TSGMVYLTSG ITGGICMTAL
301: LAMNVIGGVV AYGDVFGGVK IVSTVLCIWG FSSYTYGMYM KMKKEEKEKG EYSGVKTTED SGEMEVEMGN VKDDVAAADD RA

Arabidopsis Description

PUP4Probable purine permease 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SY29]
SUBAcon: [peroxisome,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.