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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 6
  • endoplasmic reticulum 2
  • golgi 2
  • extracellular 1
  • plasma membrane 2
  • vacuole 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d038965_P001 Maize mitochondrion, plastid 89.43 90.16
EES18657 Sorghum mitochondrion 76.42 81.74
Os05t0556800-01 Rice mitochondrion 76.69 73.89
TraesCS1A01G386000.1 Wheat plastid 73.98 72.61
TraesCS1B01G413400.1 Wheat plastid 73.98 72.03
TraesCS1D01G394000.1 Wheat plastid 73.44 71.5
HORVU1Hr1G085140.1 Barley endoplasmic reticulum 71.27 69.58
TraesCS1D01G393900.1 Wheat plastid 74.25 69.54
TraesCS1B01G413500.1 Wheat plastid 75.07 68.56
HORVU1Hr1G085120.1 Barley plastid 73.98 68.25
TraesCS1A01G385800.1 Wheat plastid 74.53 68.07
HORVU1Hr1G085230.1 Barley mitochondrion 74.8 67.81
TraesCS1D01G394100.1 Wheat plastid 73.98 67.57
TraesCS1A01G386100.1 Wheat plastid 73.98 67.57
EES01264 Sorghum plasma membrane 68.02 64.86
TraesCS1B01G413300.1 Wheat mitochondrion 73.71 64.45
HORVU1Hr1G085150.1 Barley plastid 73.98 64.39
CDY02338 Canola plasma membrane 38.48 44.38
VIT_18s0089g01410.t01 Wine grape plasma membrane 41.19 44.19
CDY09527 Canola plasma membrane 37.94 43.75
AT1G30840.1 Thale cress peroxisome, plasma membrane, vacuole 45.26 43.72
Solyc10g005160.1.1 Tomato plasma membrane 42.28 43.7
Bra023141.1-P Field mustard plasma membrane 46.07 43.48
Bra023144.1-P Field mustard endoplasmic reticulum, peroxisome, plasma membrane 46.07 43.48
CDY09533 Canola plasma membrane 37.67 43.44
PGSC0003DMT400086024 Potato cytosol, endoplasmic reticulum, extracellular 16.53 43.26
PGSC0003DMT400090756 Potato endoplasmic reticulum, extracellular, vacuole 16.8 43.06
Solyc10g005150.1.1 Tomato plasma membrane 42.01 40.58
Solyc10g005170.1.1 Tomato cytosol, peroxisome, plasma membrane 43.09 39.95
KRH12150 Soybean plasma membrane 38.21 39.39
KRH37148 Soybean cytosol, peroxisome, plasma membrane 42.55 39.15
KRH12149 Soybean plasma membrane 42.55 38.86
Solyc02g082170.1.1 Tomato plasma membrane 43.09 38.69
PGSC0003DMT400035529 Potato cytosol, mitochondrion, peroxisome, plastid 44.17 38.44
PGSC0003DMT400090938 Potato endoplasmic reticulum, extracellular 16.53 38.36
KRH37147 Soybean nucleus, peroxisome, plasma membrane 42.28 38.14
KRH37149 Soybean plasma membrane 40.92 37.1
KXG35809 Sorghum plasma membrane 31.98 30.33
EER99040 Sorghum plasma membrane 30.89 30.08
EER99038 Sorghum plasma membrane 23.58 29.9
EES11332 Sorghum peroxisome 26.83 26.47
EES11334 Sorghum peroxisome 26.56 25.72
KXG26473 Sorghum cytosol, peroxisome, plasma membrane 26.83 25.38
OQU93095 Sorghum plasma membrane 25.75 25.13
KXG24673 Sorghum peroxisome 27.64 24.88
OQU89926 Sorghum mitochondrion, plasma membrane 25.2 22.96
EES10997 Sorghum plasma membrane 25.75 22.78
KXG27004 Sorghum golgi, peroxisome, vacuole 23.58 22.08
EES05697 Sorghum plastid 27.1 19.96
GSMUA_Achr10P... Banana cytosol, extracellular, golgi 1.36 4.27
Protein Annotations
MapMan:24.2.1.6EntrezGene:8074571UniProt:A0A1Z5R4W2GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021EnsemblPlants:OQU78406ProteinID:OQU78406
ProteinID:OQU78406.1PFAM:PF16913PANTHER:PTHR31376PANTHER:PTHR31376:SF7InterPro:PUP_plantEnsemblPlantsGene:SORBI_3009G227201
SUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI0001A89255RefSeq:XP_002441494.1SEG:seg:
Description
hypothetical protein
Coordinates
chr9:-:56858498..56859951
Molecular Weight (calculated)
38194.9 Da
IEP (calculated)
9.454
GRAVY (calculated)
0.781
Length
369 amino acids
Sequence
(BLAST)
001: MATAAGGAIA GPTALSRRRL LLLTANYVAL LVGSVASSLL SRFYFAHGGR NRWVVTLVQS AGFPLLVVAV LVARRPAAAP RPFTWFSRRF LTACLVIGAL
101: MGANNLLFSY STSFLPVSTS SLLLSTQLAF TLVLAAIIVR HPLTFVNLNA VVLLTISSVL LALRSGDSGE NPEGGSAAHY FVGYVVTLGA AGLFAAYLPV
201: MELLYRKAVS GGFILAVEVQ VAMQAMATAV AAVGLAAAGG ARDDVARWKG SAALYWVVVL TLVLTWQACF MGTAGVIYLT SSLHSGVCMA AVLTANVLGG
301: VVVFGDPFGA EKGIATALCA WGLASYLYGE YTKMKKEVAA VADTSAADAD SVRKSLTASG GPGDELEAV
Best Arabidopsis Sequence Match ( AT1G30840.1 )
(BLAST)
001: MSDGRVNADP QQEENMVKPP VKRSLTLLIV TYFFLFFGSI ASSLLAKYYF VYGGSSRWVS TWVQSAGFPL LLILIYFPHY VLKTTTRRPF TRFTLRHLIF
101: SVLIGLVLGF NNFLFSWGTS YLPVSTSSLL LSTQLVFTLI LSRIIVKQKI TFSNLNCVVL LTLSSVLLAL DSSKDKPSGL TKTKYFIGYV STIGAGLLFA
201: LYLPVTEKLY RTVYCYAMVM EVQLVMEFAA TVFATIGMAC EGGFKEMVKE ANHVFTKGPT FYWTFAILAN VVTWQLSFAA TSGMVYLTSG ITGGICMTAL
301: LAMNVIGGVV AYGDVFGGVK IVSTVLCIWG FSSYTYGMYM KMKKEEKEKG EYSGVKTTED SGEMEVEMGN VKDDVAAADD RA
Arabidopsis Description
PUP4Probable purine permease 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SY29]
SUBAcon: [plasma membrane,peroxisome,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.