Factsheet for VIT_02s0012g00730.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
plasma membrane 3
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400004654	Potato	endoplasmic reticulum, plasma membrane, plastid	52.7	67.88
KRH04294	Soybean	plasma membrane	67.1	66.92
PGSC0003DMT400004651	Potato	cytosol, nucleus, plasma membrane	52.19	61.14
Solyc08g077370.2.1	Tomato	plasma membrane	52.44	61.08
VIT_10s0003g02850.t01	Wine grape	plasma membrane	57.07	60.0
Solyc08g077380.2.1	Tomato	peroxisome, plasma membrane, vacuole	56.04	57.82
KRH57570	Soybean	plasma membrane	54.24	54.1
VIT_15s0021g00650.t01	Wine grape	plastid	51.67	52.89
VIT_19s0014g00150.t01	Wine grape	plasma membrane	50.39	51.72
KRH57573	Soybean	plasma membrane	47.56	50.82
KRH04293	Soybean	plasma membrane	46.02	50.0
VIT_10s0003g02840.t01	Wine grape	plasma membrane	54.76	48.3
VIT_18s0001g06940.t01	Wine grape	endoplasmic reticulum, plasma membrane	30.33	33.62
VIT_18s0001g06910.t01	Wine grape	plasma membrane	29.82	33.05
VIT_18s0001g06950.t01	Wine grape	plasma membrane	29.31	32.66
VIT_18s0089g01410.t01	Wine grape	plasma membrane	28.53	32.27
VIT_18s0001g06300.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	23.39	28.8
VIT_11s0016g00010.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	25.71	28.25

Protein Annotations

EntrezGene:100247087	wikigene:100247087	MapMan:24.2.1.6	ProteinID:CCB57931	ProteinID:CCB57931.1	UniProt:F6HTC1
EMBL:FN596247	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	EntrezGene:LOC100247087	wikigene:LOC100247087	PFAM:PF16913	PANTHER:PTHR31376
PANTHER:PTHR31376:SF16	InterPro:PUP_plant	SUPFAM:SSF103481	TMHMM:TMhelix	UniParc:UPI0002108068	ArrayExpress:VIT_02s0012g00730
EnsemblPlantsGene:VIT_02s0012g00730	EnsemblPlants:VIT_02s0012g00730.t01	RefSeq:XP_002278972	RefSeq:XP_002278972.1	RefSeq:XP_010663907.1	SEG:seg

Description

No Description!

Coordinates

chr2:+:6637468..6638866

Molecular Weight (calculated)

43025.4 Da

IEP (calculated)

5.782

GRAVY (calculated)

0.416

Length

389 amino acids

Sequence
(BLAST)

001: MEAAQELQLQ LQTRAESREG SSQRDATVSG NQPSLPKPIL YKWWLRVAIY TLFLLAGQST ATLLGRLYYD KGGNSKWMAT FVQSAGFPIL LPLFFFFSPT
101: SKSTPISISP SSAKPPSFST ILFLYLFFGL LLTGDNLMYS YGLLYLPVST YSLLCATQLA FNALFSFFLN SQKFTMLILN SLVLLTISAS LLAVHSDSED
201: TTGTPKGKYV IGFLCTLGAS ATYSLYLSLV QLSFQKVIKR ETFDVVLEMQ VYPSFVATCA CVVGLFASGE WSGLSEEMKE YEDGKISYLM TLIWTAVTWQ
301: ISSVGLLGLI FEVSSLFSNV ISTVALPVVP VVAVMFFHDK MDGVKVMALL LAVWGFVSYI YQHYLDDCRS KETKKTNEGE ASNALTEVC

Best Arabidopsis Sequence Match ( AT4G18220.1 )
(BLAST)

001: MKGDQEVQVI VQQGKEPIPT DQDERSSVSG SQTKLSHSNT YKRWLRVAIY TFFVISGQSV ATILGRLYYE NGGNSKWLAT VVQLVGFPIL LPYHLLSVKT
101: HTTTQRDGKL TSLRNRALVY IVLGLLVGAA CYLYSIGLLY LPVSTLSLIC ASQLAFTAFF SYLLNSQKLT PIILNSLFLL TISSTLLAFN NEESDSKKVT
201: KGEYVKGFVC TVGASAGFGL LLSLQQLAFR KVLKKQTFSE VINMIIYMSL VASCVSVVGL FASSEWKTLS SEMENYKLGK VSYVMNLVWT AVTWQVFSIG
301: CTGLIFELSS LFSNAISALG LPVVPILAVI IFHDKMNGLK VISMILAIWG FVSYVYQQYL DETNLKKSNE IPTTESPDRP EAEGSSEQSK

Arabidopsis Description

PUP21Purine permease 21 [Source:UniProtKB/Swiss-Prot;Acc:O49726]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.