Factsheet for TraesCS4A01G404300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	endoplasmic reticulum, plasma membrane, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G303900.1	Wheat	plastid	98.21	98.21
TraesCS4D01G302100.1	Wheat	plastid	96.68	97.42
TraesCS4A01G404200.1	Wheat	plastid	96.16	96.16
TraesCS4A01G404100.1	Wheat	plastid	92.58	92.11
HORVU4Hr1G078220.1	Barley	endoplasmic reticulum, plasma membrane	63.94	91.91
TraesCS4A01G404400.1	Wheat	plastid	88.24	88.46
Zm00001d027979_P001	Maize	plasma membrane	68.03	85.26
Zm00001d048232_P001	Maize	plastid	79.54	82.71
Zm00001d027978_P001	Maize	plastid	80.82	81.65
Os03t0187800-01	Rice	plastid	80.82	79.2
OQU93095	Sorghum	plasma membrane	59.34	61.38
TraesCS5A01G247800.1	Wheat	cytosol, peroxisome, plasma membrane	40.92	44.32
TraesCS5A01G429100.1	Wheat	plasma membrane	41.69	42.34
TraesCS5A01G247600.1	Wheat	plasma membrane	40.41	41.91
TraesCS5A01G247700.1	Wheat	plasma membrane	39.64	41.01
Solyc12g057090.1.1	Tomato	plasma membrane	27.62	36.36
PGSC0003DMT400045771	Potato	endoplasmic reticulum, extracellular, plasma membrane	15.6	35.88
Solyc12g057100.1.1	Tomato	cytosol, golgi, plasma membrane	32.99	35.64
VIT_18s0001g06300.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	28.64	35.44
PGSC0003DMT400045772	Potato	cytosol, peroxisome, vacuole	26.09	32.08
TraesCS3A01G267500.1	Wheat	plastid	28.9	29.5
TraesCS2A01G452500.1	Wheat	peroxisome	29.16	29.46
TraesCS2A01G452400.1	Wheat	plasma membrane	28.13	28.8
TraesCS5A01G358700.2	Wheat	cytosol, endoplasmic reticulum, plastid	27.88	27.25
TraesCS1A01G386100.1	Wheat	plastid	27.88	26.98
TraesCS2A01G452600.1	Wheat	peroxisome	25.58	26.74
TraesCS5A01G413800.1	Wheat	peroxisome	25.58	26.74
TraesCS1A01G386000.1	Wheat	plastid	25.06	26.06
TraesCS1A01G385800.1	Wheat	plastid	26.6	25.74
TraesCS6A01G262900.1	Wheat	plasma membrane	25.58	25.64
TraesCS2A01G452300.1	Wheat	mitochondrion	27.62	24.71

Protein Annotations

EnsemblPlants:TraesCS4A01G404300.1	EnsemblPlantsGene:TraesCS4A01G404300	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	InterPro:PUP_plant	PANTHER:PTHR31376	PANTHER:PTHR31376:SF6
PFAM:PF16913	SEG:seg	TMHMM:TMhelix	MapMan:24.2.1.6	:	:

Description

No Description!

Coordinates

chr4A:-:677987692..677988867

Molecular Weight (calculated)

41160.4 Da

IEP (calculated)

9.758

GRAVY (calculated)

0.655

Length

391 amino acids

Sequence
(BLAST)

001: MAAITASASP AMQEAAKTPS ASPPRAMAAS TASPARYRPS LLVIFSACLV LIGAGGPLLL RVYFVHGGQR LWLSALLQIS GWPLLLPPLC VSLFRGRRHG
101: IANLLLPLRL VGAAAVLGSL YAVSCFVYAM GSQALLLSTS SLLLATQLAF TAVFAFLFVG LRFTPFSANA VMLLIIGPAV LGVGPGSGKP AGEPSKTYWT
201: GFCEGIAAAA LAGLVLPLVE VAMERYGRRT GPAARTPPPY STVMQMQAVM GAAGTMVCLL GMAIKSDFGA LRSEAATFGL GETNYYLVLV WDAVSWQLLN
301: LGIMGLITCA SSLLAGIMIA VLLPLSEILA VLFLHEKFDG PKGIALVLSL WGFASYMYGE KVHQKKAEAQ KNQLLQQQMA RKTGDLELAT P

Best Arabidopsis Sequence Match ( AT1G28220.1 )
(BLAST)

001: MVKALVIINC IILAIGNCGG PLIMRLYFNN GGKRIWFSTF LETAGFPVIF IPLLFSYITR RRSNNVGDST SFFLIKPRLL IAAVIVGILS GFDNYLYAYG
101: IAYLPVSTAA LIIASQLAFI AIFSFFMVKH KFTPFTINAV VLLTVGAAVL GMHTETDKPV HETHKQYITG FLITVAAAVM YAFILPLVEL AYQKAKQTMS
201: YTLVLEFQLI LCLLASIVSV IGMFIAGDFK ALPKEAREFK LGEALFYVVA VFSAIIWQGF FLGAIGLIFS TSSLVSGIMI SVLLPITEVL AVIFYHEKFQ
301: AEKGLSLALS LWGFVSYFYG EIKSGEDKRR IQQEESQETE QSSLSRPISE C

Arabidopsis Description

PUP3Purine permease 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ95]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.