Factsheet for TraesCS2A01G452600.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	peroxisome, plasma membrane, plastid
MultiLoc:	peroxisome
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3A01G132400.1
TraesCS3A01G294200.1
TraesCS3B01G167100.1
TraesCS3B01G328800.1
TraesCS3D01G148600.1
TraesCS3D01G294000.1
TraesCS6A01G160500.1
TraesCS6B01G190900.1
TraesCS6D01G152200.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G41160.1	TraesCS3A01G132400.1	AT5G46240.1	15299147
AT5G41160.1	TraesCS3A01G294200.1	AT5G46240.1	15299147
AT5G41160.1	TraesCS3B01G167100.1	AT5G46240.1	15299147
AT5G41160.1	TraesCS3B01G328800.1	AT5G46240.1	15299147
AT5G41160.1	TraesCS3D01G148600.1	AT5G46240.1	15299147
AT5G41160.1	TraesCS3D01G294000.1	AT5G46240.1	15299147
AT5G41160.1	TraesCS6A01G160500.1	AT5G46240.1	15299147
AT5G41160.1	TraesCS6B01G190900.1	AT5G46240.1	15299147
AT5G41160.1	TraesCS6D01G152200.1	AT5G46240.1	15299147

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G413800.1	Wheat	peroxisome	97.33	97.33
TraesCS2B01G474100.1	Wheat	peroxisome	97.06	97.06
TraesCS2D01G452400.1	Wheat	peroxisome	96.79	96.79
HORVU2Hr1G105300.1	Barley	peroxisome	93.58	93.58
Zm00001d002515_P001	Maize	peroxisome	67.38	67.74
EES11332	Sorghum	peroxisome	66.84	66.84
HORVU5Hr1G019740.1	Barley	cytosol, plastid	53.21	59.76
TraesCS6A01G262900.1	Wheat	plasma membrane	60.43	57.95
GSMUA_Achr5P12690_001	Banana	plasma membrane	52.94	56.73
KRH00977	Soybean	endoplasmic reticulum, plasma membrane, vacuole	52.67	53.97
KRH40250	Soybean	endoplasmic reticulum, plasma membrane, vacuole	51.87	53.59
CDY12545	Canola	plasma membrane	41.98	52.68
CDY36342	Canola	endoplasmic reticulum, plasma membrane, vacuole	41.71	52.17
AT1G44750.1	Thale cress	plasma membrane	50.27	49.6
VIT_15s0021g00650.t01	Wine grape	plastid	49.47	48.68
PGSC0003DMT400004320	Potato	plasma membrane	47.33	47.97
Solyc01g088550.2.1	Tomato	plasma membrane	46.52	47.8
Bra037874.1-P	Field mustard	plasma membrane	40.91	45.81
AT4G08700.1	Thale cress	plasma membrane	44.12	45.71
VIT_19s0014g00150.t01	Wine grape	plasma membrane	45.99	45.38
TraesCS2A01G452400.1	Wheat	plasma membrane	45.99	45.03
KRH13483	Soybean	plasma membrane	36.9	44.95
TraesCS2A01G452500.1	Wheat	peroxisome	46.26	44.7
Bra036955.1-P	Field mustard	plasma membrane	49.47	44.58
CDY14989	Canola	plasma membrane	49.2	44.34
AT5G41160.1	Thale cress	plasma membrane	43.05	44.23
CDX71327	Canola	plasma membrane	48.93	43.99
CDY54350	Canola	plasma membrane	37.17	41.87
CDX75141	Canola	plasma membrane	36.1	40.66
KRH21843	Soybean	mitochondrion	44.38	39.52
TraesCS2A01G452300.1	Wheat	mitochondrion	44.38	37.99
TraesCS5A01G247700.1	Wheat	plasma membrane	29.68	29.37
TraesCS5A01G247600.1	Wheat	plasma membrane	29.41	29.18
TraesCS5A01G247800.1	Wheat	cytosol, peroxisome, plasma membrane	27.81	28.81
TraesCS4A01G404400.1	Wheat	plastid	28.07	26.92
TraesCS5A01G429100.1	Wheat	plasma membrane	27.54	26.75
TraesCS4A01G404200.1	Wheat	plastid	27.01	25.83
TraesCS4A01G404300.1	Wheat	plastid	26.74	25.58
TraesCS4A01G404100.1	Wheat	plastid	26.74	25.45
TraesCS5A01G358700.2	Wheat	cytosol, endoplasmic reticulum, plastid	26.47	24.75
TraesCS3A01G267500.1	Wheat	plastid	24.6	24.02
TraesCS1A01G386000.1	Wheat	plastid	22.46	22.34
TraesCS1A01G385800.1	Wheat	plastid	22.73	21.04
TraesCS1A01G386100.1	Wheat	plastid	22.46	20.79

Protein Annotations

EnsemblPlants:TraesCS2A01G452600.1	EnsemblPlantsGene:TraesCS2A01G452600	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	InterPro:PUP_plant	PANTHER:PTHR31376	PANTHER:PTHR31376:SF2
PFAM:PF16913	SEG:seg	TMHMM:TMhelix	MapMan:24.2.1.6	:	:

Description

No Description!

Coordinates

chr2A:+:702112389..702113789

Molecular Weight (calculated)

40391.4 Da

IEP (calculated)

6.676

GRAVY (calculated)

0.495

Length

374 amino acids

Sequence
(BLAST)

001: MADASAGNNA GSTSNAEVQI QIPVGPPKAE PGAPSKNSGA KNWRWWMMVS VDVFFVVAGQ TSTTLLGRYY YHQGGSSKWI STFVQTAGFP ILFLALLCFP
101: KSSGGGGANG DGPVAKVAVI YVVLGLVIAA DDMMYAGGLK YLPVSTYSLI CASQLAFNIV FSYVLNSQKL TGLIFNDVIL LTLSDALLGV NHDETEDMSG
201: MPRGKYLMGF LLMLGASGTY SLILSLMQLT FENVIKKHTY TAVLNMQIYT ALVATIASMV GLFTSGEWRM MTEEMDTFRS GQFSYFMTLV WTAVSWQITS
301: VGVVGLVFEV SSLFSNVIST VSLPIVPLFA VLIFHDTMDG IKIISMLIAA WGFVSYLMQH FIDDKKARKA AAGG

Best Arabidopsis Sequence Match ( AT1G44750.1 )
(BLAST)

001: MAKEPVRVLV TGAAGNQEPI LVKEESVVGI PTPLLKLKSW QWWVLVSVNI FFLIGGQAAS VLLGRFYYDE GGNSKWMATL VQTAAFPILY IPLLLLPSSA
101: SVESSESSCS LKYIVLIYVL LGVIIAGDNM LYSVGLLYLS ASTYSLICAT QLAFNAVFSY FINAQKFTAL ILNSVVLLSF SAALIALNDD ADTPSGVSRS
201: KYIVGFVCTL AASALYSLLL SLMQFSFEKI LKRETFSVVL EMQIYTSLVA TCVSVIGLFA SGEWRTLHGE MEGYHKGQAS YVLTLVWTAV TWQVCSVGVV
301: GLIFLVTSLF SNVISTLSLA VTPLAALVVF RDKMSGVKIM AMLIAIWGFA SYVYQNHIDD LKVRQARQQA QAGRVEPPC

Arabidopsis Description

PUP11Probable purine permease 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPF6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.