Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plasma membrane
Predictor Summary:
Predictor Summary:
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G294200.1 | Wheat | mitochondrion, plasma membrane | 97.81 | 98.2 |
| TraesCS3B01G328800.1 | Wheat | plasma membrane | 98.01 | 97.43 |
| HORVU3Hr1G072850.15 | Barley | plastid | 87.65 | 85.94 |
| Os01t0756700-01 | Rice | plasma membrane | 81.27 | 81.27 |
| EES01496 | Sorghum | mitochondrion, plasma membrane | 81.27 | 76.98 |
| Bra017567.1-P | Field mustard | plasma membrane | 61.75 | 47.18 |
| CDY35154 | Canola | plasma membrane | 61.75 | 47.18 |
| CDY03233 | Canola | plasma membrane | 61.55 | 47.1 |
| CDY33464 | Canola | cytosol, plasma membrane, plastid | 60.36 | 45.5 |
| AT5G46240.1 | Thale cress | plasma membrane | 61.35 | 45.49 |
| Bra025028.1-P | Field mustard | cytosol, endoplasmic reticulum, plasma membrane | 60.16 | 45.35 |
| CDY62359 | Canola | cytosol, plasma membrane, plastid | 59.76 | 45.05 |
| CDX99479 | Canola | plasma membrane | 60.96 | 44.67 |
| CDX78839 | Canola | plasma membrane | 60.56 | 44.44 |
| Bra013296.1-P | Field mustard | plasma membrane | 60.56 | 44.25 |
| KRH44805 | Soybean | plasma membrane | 62.15 | 42.86 |
| Solyc02g070530.2.1 | Tomato | nucleus | 58.57 | 42.73 |
| Solyc08g016500.2.1 | Tomato | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane | 57.97 | 42.61 |
| AT4G18290.2 | Thale cress | mitochondrion, plasma membrane | 59.96 | 42.51 |
| PGSC0003DMT400054339 | Potato | plasma membrane | 57.97 | 42.3 |
| TraesCS6D01G152200.1 | Wheat | plasma membrane | 60.76 | 42.01 |
| PGSC0003DMT400024968 | Potato | cytosol, plasma membrane, vacuole | 56.77 | 41.36 |
| TraesCS3D01G148600.1 | Wheat | plasma membrane | 59.16 | 41.31 |
| KRH21063 | Soybean | plasma membrane | 62.15 | 40.15 |
| KRH11194 | Soybean | plasma membrane | 61.35 | 39.64 |
| VIT_10s0003g03270.t01 | Wine grape | plasma membrane | 62.15 | 39.44 |
| Zm00001d012717_P002 | Maize | plasma membrane | 80.28 | 39.09 |
| Solyc03g058900.1.1 | Tomato | cytosol | 15.14 | 38.97 |
| CDX76529 | Canola | plasma membrane | 55.18 | 38.9 |
| Bra021012.1-P | Field mustard | plasma membrane | 54.98 | 38.76 |
| KRH58233 | Soybean | cytosol, extracellular, plasma membrane | 17.13 | 38.74 |
| TraesCS3D01G246300.1 | Wheat | plastid | 43.03 | 36.3 |
| CDY34066 | Canola | endoplasmic reticulum, plasma membrane | 40.64 | 33.72 |
| TraesCS3D01G219600.1 | Wheat | plasma membrane | 56.18 | 31.44 |
| PGSC0003DMT400054318 | Potato | nucleus | 19.32 | 30.79 |
| TraesCS2D01G342500.1 | Wheat | mitochondrion, plastid | 51.59 | 28.68 |
| TraesCS1D01G267800.1 | Wheat | plastid | 49.0 | 28.44 |
| PGSC0003DMT400024866 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 13.74 | 23.88 |
| TraesCS2D01G311300.1 | Wheat | plasma membrane | 32.07 | 21.18 |
| TraesCS7D01G203200.1 | Wheat | cytosol, plasma membrane, vacuole | 34.66 | 21.17 |
| TraesCS7D01G203100.1 | Wheat | cytosol | 34.66 | 20.99 |
| TraesCS7D01G202900.1 | Wheat | plasma membrane | 32.27 | 19.8 |
Protein Annotations
| Gene3D:1.10.287.70 | Gene3D:2.60.120.10 | MapMan:24.3.2.2 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005216 |
| GO:GO:0005249 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006811 | GO:GO:0006813 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0055085 | InterPro:IPR000595 | InterPro:IPR014710 | InterPro:Ion_trans_dom | InterPro:K_chnl_volt-dep_EAG/ELK/ERG |
| PFAM:PF00027 | PFAM:PF00520 | PRINTS:PR01463 | PFscan:PS50042 | PANTHER:PTHR10217 | PANTHER:PTHR10217:SF619 |
| InterPro:RmlC-like_jellyroll | SMART:SM00100 | SUPFAM:SSF51206 | SUPFAM:SSF81324 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS3D01G294000 |
| EnsemblPlants:TraesCS3D01G294000.1 | InterPro:cNMP-bd-like | InterPro:cNMP-bd_dom | TIGR:cd00038 | SEG:seg | : |
Description
No Description!
Coordinates
chr3D:-:405308758..405312693
Molecular Weight (calculated)
57457.7 Da
IEP (calculated)
8.192
GRAVY (calculated)
0.071
Length
502 amino acids
Sequence
(BLAST)
(BLAST)
001: MARPSRARTG SRVTRCFPCY DGDRSGEFSG CNVPNDLLPS LGATAAAQPT AGRYLVSPYG RRYRVWETFL ILLVVYSAWI CPLEFAFLRH LPRAPFVVDD
101: VVNGFFAVDI LLTFFVPYVD NRSYLVVDDP KKIALRYLST WFIFDVCSTV PFRSITHLFT RHEHSLGLKF LNVLRLWRLR RVSSLFARLE KDIRFNYAVI
201: RCTKLISVTL FAVHCAGCIN YLIADRYPDP SRTWIGAAHP DFREDGLWVR YVTCLYWSIT TMTTTGYGDL HAQNAREMLF GISYMLFNLW LTAYLIGNMT
301: NLVVHSTSRT RDFRDMVQAA TEFAARNQLP RQIEEQMLNH ICLRFKAEGL KQQDTLDILP KAMRSSISLY LFFPVVQGAY LFRGVSPSFI QQLVTEMVAE
401: YFAPKEDIIL QNEYPSDLHL LVTGEVDIVA FLDGTEQVYG KATEGGLLGE IGVLCNKPQP FTFRTTKLSQ VLRISRPKLM DIIQENAEDG EIIRINLEQV
501: NV
101: VVNGFFAVDI LLTFFVPYVD NRSYLVVDDP KKIALRYLST WFIFDVCSTV PFRSITHLFT RHEHSLGLKF LNVLRLWRLR RVSSLFARLE KDIRFNYAVI
201: RCTKLISVTL FAVHCAGCIN YLIADRYPDP SRTWIGAAHP DFREDGLWVR YVTCLYWSIT TMTTTGYGDL HAQNAREMLF GISYMLFNLW LTAYLIGNMT
301: NLVVHSTSRT RDFRDMVQAA TEFAARNQLP RQIEEQMLNH ICLRFKAEGL KQQDTLDILP KAMRSSISLY LFFPVVQGAY LFRGVSPSFI QQLVTEMVAE
401: YFAPKEDIIL QNEYPSDLHL LVTGEVDIVA FLDGTEQVYG KATEGGLLGE IGVLCNKPQP FTFRTTKLSQ VLRISRPKLM DIIQENAEDG EIIRINLEQV
501: NV
001: MEKKKVWFWG VKDDGEGGGG RGGGRTKDAE DDVADHLSRD GTMSQYSLSK GLLPSLGANN RSSRDVILPR FIVSPFDPRY RAWETFLVFL VLYTAWASPF
101: EFGFLQKPRP PLSILDNIVN GFFAVDIVLT FFVAFLDKVT YLLVDDPKRI AWRYASTWLI FDVVSTFPYE IFGSLLHESI QGYGIFSMLR LWRLRRVSNC
201: FARLEKDRKY SYFWVRCSKL LLVTLFVIHC GACFLYSIAA HYPDPSKTFM ALTDENWKES PIAVRYNTAM YWSITTFSTT GYGDIHGVNS REMTFILFYM
301: VFNLGLSAYI IGNMTNLVVH VTGRTRKFRD TIQAASGFGQ RNNLPVRLQD QMVAHLCLRY RTDSEGLQQQ EIIDSLPKAI RSSISHYLFY EVVDKIYLFH
401: GISNDLLFQL VTEMKAEYFP PKEDVILQNE APTDFYILVT GAVDIIARVN GVEQVVSEAQ RGHVFGEVGV LCYRPQLFTV RTKRLSQLLR LNRTVLLNLV
501: QANVGDGAII MNNLLQHLKD SEDPVMKGVL ADTEHMLAQG KMDLPLSLCF AAARGDDLLL HQLLRRGSSP NEMDKDGRTA LHIAASKGSH YCVVLLLEHG
601: ADPNIRDSEG NVPLWEAIIG RHREIAKLLA ENGAKLSLDS VSYFSGLAVE KNCLDALKDI IKYGGDVTLP DGNGTTALHR AVSEGHLEIV KFLLDQGADL
701: DWPDSYGWTP RGLADHQGNE EIKTLFHNHR PVEKKPKPIP GIPQSPVTGK PLMKYSSEPT MHSGELVLDG GQVVVSQKRK LNNFRNSLFG IISAANSADD
801: GGEVPRSPAV PGGGGSMIYP ERVTISSPEN GETGGKVVLL PNSMEELLKI GENKMGFVPT KVLTREGAEI DDITLIRDGD FLLLSRDP
101: EFGFLQKPRP PLSILDNIVN GFFAVDIVLT FFVAFLDKVT YLLVDDPKRI AWRYASTWLI FDVVSTFPYE IFGSLLHESI QGYGIFSMLR LWRLRRVSNC
201: FARLEKDRKY SYFWVRCSKL LLVTLFVIHC GACFLYSIAA HYPDPSKTFM ALTDENWKES PIAVRYNTAM YWSITTFSTT GYGDIHGVNS REMTFILFYM
301: VFNLGLSAYI IGNMTNLVVH VTGRTRKFRD TIQAASGFGQ RNNLPVRLQD QMVAHLCLRY RTDSEGLQQQ EIIDSLPKAI RSSISHYLFY EVVDKIYLFH
401: GISNDLLFQL VTEMKAEYFP PKEDVILQNE APTDFYILVT GAVDIIARVN GVEQVVSEAQ RGHVFGEVGV LCYRPQLFTV RTKRLSQLLR LNRTVLLNLV
501: QANVGDGAII MNNLLQHLKD SEDPVMKGVL ADTEHMLAQG KMDLPLSLCF AAARGDDLLL HQLLRRGSSP NEMDKDGRTA LHIAASKGSH YCVVLLLEHG
601: ADPNIRDSEG NVPLWEAIIG RHREIAKLLA ENGAKLSLDS VSYFSGLAVE KNCLDALKDI IKYGGDVTLP DGNGTTALHR AVSEGHLEIV KFLLDQGADL
701: DWPDSYGWTP RGLADHQGNE EIKTLFHNHR PVEKKPKPIP GIPQSPVTGK PLMKYSSEPT MHSGELVLDG GQVVVSQKRK LNNFRNSLFG IISAANSADD
801: GGEVPRSPAV PGGGGSMIYP ERVTISSPEN GETGGKVVLL PNSMEELLKI GENKMGFVPT KVLTREGAEI DDITLIRDGD FLLLSRDP
Arabidopsis Description
AKT6Potassium channel AKT6 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXE6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.