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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, plastid, cytosol

Predictor Summary:
  • nucleus 1
  • plasma membrane 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • plastid 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plasma membrane, plastid
Any Predictor:cytosol, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX75141
CDX79135
CDX82921
CDY03233
CDY33464
CDY35154
CDY35373
CDY54350
CDY55714
CDY62359

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G46240.1 CDY35373 AT2G26650.1 15299147
AT5G46240.1 CDY55714 AT2G26650.1 15299147
AT5G46240.1 CDX79135 AT4G22200.1 12034902
AT5G46240.1 CDX82921 AT4G22200.1 12034902
AT5G46240.1 CDX79135 AT4G22200.1 15299147
AT5G46240.1 CDX82921 AT4G22200.1 15299147
AT5G46240.1 CDX79135 AT4G22200.1 17085433
AT5G46240.1 CDX82921 AT4G22200.1 17085433
AT5G46240.1 CDX75141 AT5G41160.1 15299147
AT5G46240.1 CDY54350 AT5G41160.1 15299147
AT5G46240.1 CDY03233 AT5G46240.1 11042178
AT5G46240.1 CDY33464 AT5G46240.1 11042178
AT5G46240.1 CDY35154 AT5G46240.1 11042178
AT5G46240.1 CDY62359 AT5G46240.1 11042178
AT5G46240.1 CDY03233 AT5G46240.1 15299147
AT5G46240.1 CDY33464 AT5G46240.1 15299147
AT5G46240.1 CDY35154 AT5G46240.1 15299147
AT5G46240.1 CDY62359 AT5G46240.1 15299147
AT5G46240.1 CDY03233 AT5G46240.1 17085433
AT5G46240.1 CDY33464 AT5G46240.1 17085433
AT5G46240.1 CDY35154 AT5G46240.1 17085433
AT5G46240.1 CDY62359 AT5G46240.1 17085433
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra025028.1-P Field mustard cytosol, endoplasmic reticulum, plasma membrane 98.95 98.95
CDY62359 Canola cytosol, plasma membrane, plastid 98.2 98.2
CDY35154 Canola plasma membrane 84.83 86.0
CDY03233 Canola plasma membrane 84.53 85.82
AT5G46240.1 Thale cress plasma membrane 84.53 83.16
CDX78839 Canola plasma membrane 73.27 71.34
CDX99479 Canola plasma membrane 73.27 71.24
Os01t0756700-01 Rice plasma membrane 46.25 61.35
EES01496 Sorghum mitochondrion, plasma membrane 48.05 60.38
TraesCS3D01G294000.1 Wheat mitochondrion, plasma membrane 45.5 60.36
TraesCS3A01G294200.1 Wheat mitochondrion, plasma membrane 45.2 60.2
TraesCS3B01G328800.1 Wheat plasma membrane 45.65 60.2
CDX76529 Canola plasma membrane 63.51 59.41
HORVU3Hr1G072850.15 Barley plastid 45.05 58.59
KRH44805 Soybean plasma membrane 63.81 58.38
Solyc02g070530.2.1 Tomato nucleus 59.31 57.41
PGSC0003DMT400054339 Potato plasma membrane 58.26 56.4
GSMUA_Achr10P... Banana plasma membrane 55.41 56.16
CDY34066 Canola endoplasmic reticulum, plasma membrane 50.6 55.7
VIT_10s0003g03270.t01 Wine grape plasma membrane 66.07 55.63
GSMUA_Achr7P09360_001 Banana plasma membrane 54.2 55.54
KRH21063 Soybean plasma membrane 64.56 55.34
KRH11194 Soybean plasma membrane 63.66 54.57
Solyc08g016500.2.1 Tomato cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 55.86 54.47
PGSC0003DMT400024968 Potato cytosol, plasma membrane, vacuole 55.86 53.99
Os01t0210700-02 Rice extracellular 48.35 53.58
GSMUA_Achr6P05630_001 Banana cytosol, nucleus, plasma membrane 53.3 52.13
GSMUA_Achr6P26910_001 Banana endoplasmic reticulum, peroxisome, plasma membrane 56.31 51.44
GSMUA_Achr8P27260_001 Banana plasma membrane 55.11 50.62
GSMUA_Achr9P06470_001 Banana plasma membrane 54.35 50.14
Os02t0245800-01 Rice plasma membrane 53.3 49.44
EES06576 Sorghum plasma membrane 53.6 48.97
GSMUA_Achr2P09100_001 Banana plasma membrane, vacuole 54.65 48.92
TraesCS6A01G160500.1 Wheat plasma membrane 53.15 48.76
TraesCS6D01G152200.1 Wheat plasma membrane 53.0 48.62
TraesCS6B01G190900.1 Wheat plasma membrane 52.7 48.41
HORVU3Hr1G028670.16 Barley plasma membrane 50.3 47.25
TraesCS3B01G167100.1 Wheat plasma membrane 50.9 47.15
TraesCS3A01G132400.1 Wheat plasma membrane 50.75 47.01
TraesCS3D01G148600.1 Wheat plasma membrane 50.75 47.01
Zm00001d053446_P001 Maize plastid 53.45 46.97
Zm00001d016160_P001 Maize plasma membrane 48.65 46.55
Solyc03g058900.1.1 Tomato cytosol 13.21 45.13
Zm00001d039386_P001 Maize plasma membrane 42.04 43.21
PGSC0003DMT400054318 Potato nucleus 19.97 42.22
KRH58233 Soybean cytosol, extracellular, plasma membrane 13.66 40.99
CDX68872 Canola plastid 38.44 39.32
CDY13496 Canola plastid 38.44 39.02
CDX75267 Canola plastid 37.99 38.86
PGSC0003DMT400024866 Potato cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 16.67 38.41
CDY35373 Canola cytosol, plasma membrane, vacuole 48.2 37.33
CDY55714 Canola cytosol, plasma membrane, vacuole 48.05 37.17
CDX72366 Canola plastid 35.89 37.05
CDX68851 Canola plasma membrane 45.8 35.59
CDY11516 Canola cytosol 46.7 35.46
CDX79135 Canola plasma membrane 41.89 35.41
CDX76746 Canola cytosol 46.4 35.15
CDX75249 Canola plasma membrane 45.5 34.59
CDX82921 Canola cytosol 41.29 31.9
Zm00001d012717_P002 Maize plasma membrane 49.25 31.81
CDY28715 Canola cytosol 29.28 23.49
CDX71184 Canola plasma membrane 25.83 23.43
CDY51528 Canola cytosol 29.13 23.4
CDX92017 Canola plasma membrane 28.98 23.28
CDX74231 Canola plasma membrane 28.83 23.16
CDY32059 Canola plasma membrane 27.48 22.37
CDY61287 Canola plasma membrane 16.37 20.57
CDY10020 Canola cytosol 6.76 13.2
Protein Annotations
Gene3D:1.10.287.630Gene3D:1.10.287.70Gene3D:2.60.120.10MapMan:24.3.2.2GO:A0A078H7J4UniProt:A0A078H7J4
InterPro:Ankyrin_rptInterPro:Ankyrin_rpt-contain_domEnsemblPlants:CDY33464ProteinID:CDY33464ProteinID:CDY33464.1GO:GO:0003674
GO:GO:0005215GO:GO:0005216GO:GO:0005249GO:GO:0005488GO:GO:0005515GO:GO:0005575
GO:GO:0006810GO:GO:0006811GO:GO:0006813GO:GO:0008150GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0034220GO:GO:0055085GO:GO:0071805EnsemblPlantsGene:GSBRNA2T00054704001InterPro:IPR000595
InterPro:IPR002110InterPro:IPR014710InterPro:IPR020683InterPro:IPR021789InterPro:Ion_trans_domInterPro:KHA_dom
InterPro:K_chnl_volt-dep_EAG/ELK/ERGPFAM:PF00027PFAM:PF00520PFAM:PF11834PRINTS:PR01463PFscan:PS50042
PFscan:PS50088PFscan:PS50297PFscan:PS51490PANTHER:PTHR10217PANTHER:PTHR10217:SF551InterPro:RmlC-like_jellyroll
SMART:SM00100SMART:SM00248SUPFAM:SSF51206SUPFAM:SSF81324TMHMM:TMhelixUniParc:UPI0004EDBBFC
InterPro:cNMP-bd-likeInterPro:cNMP-bd_domSEG:seg:::
Description
BnaA06g36090DBnaA06g36090D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H7J4]
Coordinates
chrLK032315:-:52715..56962
Molecular Weight (calculated)
76342.5 Da
IEP (calculated)
6.609
GRAVY (calculated)
-0.179
Length
666 amino acids
Sequence
(BLAST)
001: MPISCTRNFF ERFCVEDYNI DNIKQSSFLS ADLLPSLGAR INHSTKLLIY SAWICPFQFA FITYKKDAIF IIDNIVNGFF AIDIVLTFFV AYLDSHSYLL
101: VDDPKKIAIR YLSTWFAFDV CSTAPFQPLS LLFNYNGSEL GFRILSMLRL WRLRRVSSLF ARLEKDIRFN YFWIRCTKLI SVTLFAVHCA GCFNYLIADR
201: YPEPRKTWIG AVYPDFKEAS LWNRYVTALY WSITTLTTTG YGDLHPENPR EMLFDIFFMM FNLGLTAYLI GNMTNLVVHW TSRTRSFRDT VRAASEFASR
301: NQLPHDIQDQ MLSHICLKFK TEGLKQQETL NNLPKAIRSS IANYLFLPIV QNIYLFQGVS RDFLFQLVSD IDAEYFPPKE DIILQNEAPT DLYILVSGAV
401: DFASYVDGHD QIQGKAVIGD TFGEIGVLCY RPQPFTVRTT ELSQILRISR TSLMSAMHAH AEDGRVIMNN LFMKLRGQQS IGIDATNNDQ ENRDFQRMGW
501: EEWMDSRIDC KGSDVSNSTS ENGEKALMDA IHKGDMEMVK KLLKRGINIE EPKARTEAKG GNSNSETKQR SNESDQCCSS SIQAKVKDKR VTIHMLSQEK
601: DPQRHNGKLI LLPTSIEELL GLAGEKFGGC SFTKITNAEN ADIDDLCVIR DGDHLFFHQI EFEGRH
Best Arabidopsis Sequence Match ( AT5G46240.1 )
(BLAST)
001: MSISWTRNFF ERFCVEEYNI DTIKQSSFLS ADLLPSLGAR INQSTKLRKH IISPFNPRYR AWEMWLVLLV IYSAWICPFQ FAFITYKKDA IFIIDNIVNG
101: FFAIDIILTF FVAYLDSHSY LLVDSPKKIA IRYLSTWFAF DVCSTAPFQP LSLLFNYNGS ELGFRILSML RLWRLRRVSS LFARLEKDIR FNYFWIRCTK
201: LISVTLFAIH CAGCFNYLIA DRYPNPRKTW IGAVYPNFKE ASLWNRYVTA LYWSITTLTT TGYGDFHAEN PREMLFDIFF MMFNLGLTAY LIGNMTNLVV
301: HWTSRTRTFR DSVRAASEFA SRNQLPHDIQ DQMLSHICLK FKTEGLKQQE TLNNLPKAIR SSIANYLFFP IVHNIYLFQG VSRNFLFQLV SDIDAEYFPP
401: KEDIILQNEA PTDLYILVSG AVDFTVYVDG HDQFQGKAVI GETFGEVGVL YYRPQPFTVR TTELSQILRI SRTSLMSAMH AHADDGRVIM NNLFMKLRGQ
501: QSIAIDDSNT SGHENRDFKS MGWEEWRDSR KDGYGLDVTN PTSDTALMDA IHKEDTEMVK KILKEQKIER AKVERSSSET AGRSYANDSS KKDPYCSSSN
601: QIIKPCKREE KRVTIHMMSE SKNGKLILLP SSIEELLRLA SEKFGGCNFT KITNADNAEI DDLDVIWDGD HLYFSSN
Arabidopsis Description
KAT1At5g46240 [Source:UniProtKB/TrEMBL;Acc:Q67YG3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.