CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plasma membrane
BaCelLo:	cytosol
MultiLoc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY11516	Canola	cytosol	98.63	98.86
Bra007785.1-P	Field mustard	cytosol	97.16	98.61
AT2G25600.1	Thale cress	cytosol	87.71	86.82
CDX68851	Canola	plasma membrane	75.88	77.83
CDX75249	Canola	plasma membrane	76.91	77.17
GSMUA_Achr3P20680_001	Banana	cytosol, nucleus, plasma membrane	55.06	60.27
VIT_04s0008g04990.t01	Wine grape	mitochondrion	59.73	58.46
PGSC0003DMT400074787	Potato	cytosol, nucleus, plasma membrane	56.66	57.84
GSMUA_AchrUn_...	Banana	plasma membrane	51.99	57.77
Solyc08g066990.2.1	Tomato	plasma membrane	56.54	57.66
CDY35373	Canola	cytosol, plasma membrane, vacuole	55.75	56.98
CDY55714	Canola	cytosol, plasma membrane, vacuole	55.63	56.79
PGSC0003DMT400091020	Potato	peroxisome, plasma membrane	39.48	56.79
GSMUA_Achr4P09000_001	Banana	plasma membrane	35.84	56.35
GSMUA_Achr5P09840_001	Banana	plasma membrane	52.56	56.34
GSMUA_Achr4P08990_001	Banana	cytosol, mitochondrion, plasma membrane	51.99	56.0
KRH05105	Soybean	cytosol, plasma membrane, vacuole	54.49	55.31
KRH16013	Soybean	plasma membrane	54.95	55.2
KRH61812	Soybean	plasma membrane	55.06	55.13
Zm00001d044056_P003	Maize	plasma membrane, plastid	55.06	54.57
EES03354	Sorghum	plastid	54.72	54.35
TraesCS3D01G219600.1	Wheat	plasma membrane	55.4	54.29
TraesCS3A01G233800.1	Wheat	plasma membrane	55.4	54.29
TraesCS3B01G265500.1	Wheat	plasma membrane	55.29	54.18
KRH52490	Soybean	plasma membrane	54.15	54.15
HORVU3Hr1G058300.1	Barley	plasma membrane	55.29	54.12
Zm00001d011473_P003	Maize	plastid	54.61	52.57
Solyc09g005220.1.1	Tomato	cytosol	16.95	52.1
Os01t0648000-01	Rice	plasma membrane	54.61	51.34
CDY03233	Canola	plasma membrane	36.29	48.63
CDY35154	Canola	plasma membrane	36.18	48.4
CDX78839	Canola	plasma membrane	36.63	47.08
CDX99479	Canola	plasma membrane	36.63	47.01
CDY33464	Canola	cytosol, plasma membrane, plastid	35.15	46.4
CDY62359	Canola	cytosol, plasma membrane, plastid	34.93	46.1
CDX79135	Canola	plasma membrane	37.43	41.75
CDX76529	Canola	plasma membrane	33.33	41.15
CDX68872	Canola	plastid	28.78	38.86
CDX75267	Canola	plastid	28.67	38.71
CDY13496	Canola	plastid	28.44	38.11
CDX82921	Canola	cytosol	37.09	37.82
CDY34066	Canola	endoplasmic reticulum, plasma membrane	25.48	37.02
CDX72366	Canola	plastid	26.85	36.59
CDX92017	Canola	plasma membrane	28.56	30.28
CDX71184	Canola	plasma membrane	25.14	30.11
CDX74231	Canola	plasma membrane	28.33	30.04
CDY51528	Canola	cytosol	28.21	29.92
CDY28715	Canola	cytosol	28.21	29.88
CDY32059	Canola	plasma membrane	26.85	28.85
CDY10020	Canola	cytosol	10.47	26.98
CDY61287	Canola	plasma membrane	12.06	20.0

Protein Annotations

Gene3D:1.10.287.70	Gene3D:1.25.40.20	Gene3D:2.60.120.10	MapMan:24.3.2.2	GO:A0A078CHN6	InterPro:Ankyrin_rpt
InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	EnsemblPlants:CDX76746	ProteinID:CDX76746	ProteinID:CDX76746.1	GO:GO:0003674
GO:GO:0005215	GO:GO:0005216	GO:GO:0005249	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0006810	GO:GO:0006811	GO:GO:0006813	GO:GO:0008150	GO:GO:0016020	GO:GO:0055085
EnsemblPlantsGene:GSBRNA2T00127236001	InterPro:IPR000595	InterPro:IPR002110	InterPro:IPR014710	InterPro:IPR020683	InterPro:IPR021789
InterPro:IPR036770	InterPro:Ion_trans_dom	InterPro:KHA_dom	InterPro:K_chnl_volt-dep_EAG/ELK/ERG	PFAM:PF00027	PFAM:PF00520
PFAM:PF11834	PFAM:PF12796	PFAM:PF13857	PRINTS:PR01415	PRINTS:PR01463	PFscan:PS50042
PFscan:PS50088	PFscan:PS50297	PFscan:PS51490	PANTHER:PTHR10217	PANTHER:PTHR10217:SF504	InterPro:RmlC-like_jellyroll
SMART:SM00100	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF51206	SUPFAM:SSF81324	TMHMM:TMhelix
UniParc:UPI0004EF166C	InterPro:cNMP-bd-like	InterPro:cNMP-bd_dom	SEG:seg	:	:

Description

BnaC08g33320D

Coordinates

chrLK031808:-:805391..809405

Molecular Weight (calculated)

98086.8 Da

IEP (calculated)

6.679

GRAVY (calculated)

-0.116

Length

879 amino acids

Sequence
(BLAST)

001: MADKKKKVWF WGDNDGGGGG TGKEAEDDMA GHLSRDETMS QYSHSKGLLP SLGATARSSL RPFIISPFDP RYRAWETFLV FLVLYTAWAS PFEFGFLQRP
101: RAPLSILDNI VNGFFAIDII LTFFVAFLDK VTYLLIDDPK RIAWRYVSTW FAFDVISTFP YESFGSLLHS SIQGYGIFSM LRLWRLRRVS NCFARLEKDR
201: RYSYFWVRST KLLLCTLFVI HCGACFLYSI ASHYPDPSKT FMALTDENWK QSPLAVQYNT AMYWSITTFS TTGYGDIHGV NSKEMTFILF YMVFNLGLSA
301: YIIGNMTNLV VHVTSRTRKF RDTIQAASGF GQRNNLPVRL QDQMVAHLCL RYRTDSEGLQ QQEIIDSLPK AIRSSISHYL FYEVVDNIYL FHGISNDLLF
401: QLVTEMIAEY FPPKEDVILQ NEAPTDFYIL VTGAVEIIAR VNGVEQAISE AQGGNVFGEV GVLCYRPQLF TVRTKRLTQL LRLNRTTLLN LVQANVGDGA
501: IIMNNLLQHL KDSGDPVMKG ILADTEHMLA QGKMDLPLSL CFAAARGDDL LLHQLLRRGS NSNEMDKNGR TALHIAASRG SQYCVVLLLE HGADPNIRDS
601: EGNVPLWEAI IGGHGEIAKL LAENGAKLSL DSVSYYSCLA VEKHSLEALK DIIKYGGDIT LPDGTGTTAL HRAVSEGHVE IVKFLLDKGA DLDMPDSYGW
701: TPRGLAEHQG HEDIKTLFHN HRPVEKKPQR IPGTPEFPVT GKPLMKHSSE PTLPHSGEVP LVQEGGQLVV SQRRKLSNFR NSLFGFMSAA NTGDDGGETT
801: RSSVGGGAFY PSRVTIRSSE NGELGGKVVI LPNSMEELLK VGEEKMGFLP TKVLTRDGAE IDDITLIRDG DCLILARDP

Best Arabidopsis Sequence Match ( AT2G25600.1 )
(BLAST)

001: MEKKKVWFWG VKDDGEGGGG RGGGRTKDAE DDVADHLSRD GTMSQYSLSK GLLPSLGANN RSSRDVILPR FIVSPFDPRY RAWETFLVFL VLYTAWASPF
101: EFGFLQKPRP PLSILDNIVN GFFAVDIVLT FFVAFLDKVT YLLVDDPKRI AWRYASTWLI FDVVSTFPYE IFGSLLHESI QGYGIFSMLR LWRLRRVSNC
201: FARLEKDRKY SYFWVRCSKL LLVTLFVIHC GACFLYSIAA HYPDPSKTFM ALTDENWKES PIAVRYNTAM YWSITTFSTT GYGDIHGVNS REMTFILFYM
301: VFNLGLSAYI IGNMTNLVVH VTGRTRKFRD TIQAASGFGQ RNNLPVRLQD QMVAHLCLRY RTDSEGLQQQ EIIDSLPKAI RSSISHYLFY EVVDKIYLFH
401: GISNDLLFQL VTEMKAEYFP PKEDVILQNE APTDFYILVT GAVDIIARVN GVEQVVSEAQ RGHVFGEVGV LCYRPQLFTV RTKRLSQLLR LNRTVLLNLV
501: QANVGDGAII MNNLLQHLKD SEDPVMKGVL ADTEHMLAQG KMDLPLSLCF AAARGDDLLL HQLLRRGSSP NEMDKDGRTA LHIAASKGSH YCVVLLLEHG
601: ADPNIRDSEG NVPLWEAIIG RHREIAKLLA ENGAKLSLDS VSYFSGLAVE KNCLDALKDI IKYGGDVTLP DGNGTTALHR AVSEGHLEIV KFLLDQGADL
701: DWPDSYGWTP RGLADHQGNE EIKTLFHNHR PVEKKPKPIP GIPQSPVTGK PLMKYSSEPT MHSGELVLDG GQVVVSQKRK LNNFRNSLFG IISAANSADD
801: GGEVPRSPAV PGGGGSMIYP ERVTISSPEN GETGGKVVLL PNSMEELLKI GENKMGFVPT KVLTREGAEI DDITLIRDGD FLLLSRDP

Arabidopsis Description

AKT6Potassium channel AKT6 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXE6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.