CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75249	Canola	plasma membrane	98.48	96.35
AT4G32500.1	Thale cress	plasma membrane	88.8	86.48
CDY11516	Canola	cytosol	78.41	76.62
CDX76746	Canola	cytosol	77.83	75.88
GSMUA_Achr3P20680_001	Banana	cytosol, nucleus, plasma membrane	55.89	59.65
GSMUA_AchrUn_...	Banana	plasma membrane	54.03	58.53
VIT_04s0008g04990.t01	Wine grape	mitochondrion	61.26	58.46
PGSC0003DMT400074787	Potato	cytosol, nucleus, plasma membrane	57.88	57.61
CDY35373	Canola	cytosol, plasma membrane, vacuole	57.41	57.21
GSMUA_Achr5P09840_001	Banana	plasma membrane	54.73	57.2
GSMUA_Achr4P09000_001	Banana	plasma membrane	37.22	57.07
Solyc08g066990.2.1	Tomato	plasma membrane	57.29	56.96
CDY55714	Canola	cytosol, plasma membrane, vacuole	57.06	56.79
GSMUA_Achr4P08990_001	Banana	cytosol, mitochondrion, plasma membrane	53.56	56.25
KRH05105	Soybean	cytosol, plasma membrane, vacuole	56.83	56.24
KRH16013	Soybean	plasma membrane	57.18	56.0
KRH61812	Soybean	plasma membrane	57.29	55.92
PGSC0003DMT400091020	Potato	peroxisome, plasma membrane	39.79	55.81
KRH52490	Soybean	plasma membrane	57.06	55.63
Zm00001d044056_P003	Maize	plasma membrane, plastid	56.59	54.68
EES03354	Sorghum	plastid	56.36	54.58
TraesCS3A01G233800.1	Wheat	plasma membrane	56.94	54.4
TraesCS3D01G219600.1	Wheat	plasma membrane	56.83	54.29
TraesCS3B01G265500.1	Wheat	plasma membrane	56.83	54.29
HORVU3Hr1G058300.1	Barley	plasma membrane	56.48	53.9
Zm00001d011473_P003	Maize	plastid	56.24	52.79
Os01t0648000-01	Rice	plasma membrane	56.13	51.44
Solyc09g005220.1.1	Tomato	cytosol	17.15	51.4
CDY03233	Canola	plasma membrane	36.41	47.56
CDY35154	Canola	plasma membrane	36.41	47.49
CDY33464	Canola	cytosol, plasma membrane, plastid	35.59	45.8
CDY62359	Canola	cytosol, plasma membrane, plastid	35.47	45.65
CDX78839	Canola	plasma membrane	36.41	45.61
CDX99479	Canola	plasma membrane	36.41	45.55
CDX79135	Canola	plasma membrane	39.09	42.51
CDX76529	Canola	plasma membrane	33.37	40.17
CDX82921	Canola	cytosol	38.97	38.75
CDY13496	Canola	plastid	29.29	38.26
CDX68872	Canola	plastid	29.05	38.25
CDX75267	Canola	plastid	28.94	38.1
CDX72366	Canola	plastid	27.77	36.9
CDY34066	Canola	endoplasmic reticulum, plasma membrane	25.09	35.54
CDX71184	Canola	plasma membrane	26.49	30.93
CDY51528	Canola	cytosol	29.52	30.52
CDY28715	Canola	cytosol	29.52	30.48
CDX92017	Canola	plasma membrane	28.94	29.92
CDX74231	Canola	plasma membrane	28.7	29.67
CDY32059	Canola	plasma membrane	28.0	29.34
CDY10020	Canola	cytosol	10.85	27.27
CDY61287	Canola	plasma membrane	13.19	21.32

Protein Annotations

Gene3D:1.10.287.630	Gene3D:1.10.287.70	Gene3D:1.25.40.20	Gene3D:2.60.120.10	MapMan:24.3.2.2	GO:A0A078BVJ8
InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	EnsemblPlants:CDX68851	ProteinID:CDX68851	ProteinID:CDX68851.1
GO:GO:0003674	GO:GO:0005215	GO:GO:0005216	GO:GO:0005249	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0006810	GO:GO:0006811	GO:GO:0006813	GO:GO:0008150	GO:GO:0016020
GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00130575001	InterPro:IPR000595	InterPro:IPR002110	InterPro:IPR014710	InterPro:IPR020683
InterPro:IPR021789	InterPro:IPR036770	InterPro:Ion_trans_dom	InterPro:KHA_dom	InterPro:K_chnl_volt-dep_EAG/ELK/ERG	PFAM:PF00027
PFAM:PF00520	PFAM:PF11834	PFAM:PF12796	PRINTS:PR01415	PRINTS:PR01463	PFscan:PS50042
PFscan:PS50088	PFscan:PS50297	PFscan:PS51490	PANTHER:PTHR10217	PANTHER:PTHR10217:SF504	InterPro:RmlC-like_jellyroll
SMART:SM00100	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF51206	SUPFAM:SSF81324	TMHMM:TMhelix
UniParc:UPI0004EE5125	InterPro:cNMP-bd-like	InterPro:cNMP-bd_dom	SEG:seg	:	:

Description

BnaC01g06020D

Coordinates

chrLK031789:+:1567373..1571285

Molecular Weight (calculated)

96123.8 Da

IEP (calculated)

7.063

GRAVY (calculated)

-0.075

Length

857 amino acids

Sequence
(BLAST)

001: MDNKKKKDIA AEHVSTEETM SHYSFSKGLL PPLGVNSGST RRVKLRFFIV SPFDPRYRAW DWFLVLLVVY TAWASPFEFG YLQTPRAPLS IIDNVVNGFF
101: AIDIVLTFFV AFLDKATYLL VDDPKRIAWR YVSSWLIFDV VSTIPYELFG SLLHNTIQGY GIFSMLRLWR LRRASNCFAR LEKDRKYNYF WVRCTKLLLV
201: ALFVVHCGAC FCYSIAAHYP DPSMTFMALA EPNWTQKSLL IRYVTAMYWS ITTFSTTGYG DIHGNNASER AFILFYMIFN LGLLAYIIGN MTNLVVHVTS
301: RTRNFRDTIQ GASAFAQRNK LPERLQEQMV AHLSLRYRTD SEGLQQQEII DSLPKAIRSS ISHYLFYEVV DKIYLFHGIS NDLLFQLVSE MKAEYFPPKE
401: DVILRNEAPT DFYIMVTGAA EIIAPVNGVD QVVGEAQPGH VFGEVGVLCY RPQLFTVRTK RLSQLLRLNR TAFLNLVQAN VGDGAIIMNN LLQHLKDSED
501: PVMKGILADT EQMLAQGKMD LPLSLCFAAA RGDDLLLHQL LKRGSNPNET DKNGRTALHI AASKGCHYCV VLLLEHGADP NIKDSEGSVP LWEAIFGRHE
601: EISKLLWDNG AKLSPDTVSH FSCLAVEHNS LDTLKDIVKY GGDTSLPDSN GTTALHRAVS EGNMEIVEFL LEQGADMDMP DVYGWTARGL AEHQGHEDIK
701: ALFQSQRPVE KKPKSVSGTP ENVTPLMKHS SEPVMIHHRS RESMPFLRGG SQRRKLSNFK NSLFGIMSAA NTGDEGESST LSEGVGGVYP ARVTISGEAS
801: SAGKVVKLPN SLEELIEIGE KKLGFVATKV LTREGAQIDD IRLIRDGDFL LLLKVSC

Best Arabidopsis Sequence Match ( AT4G32500.1 )
(BLAST)

001: MGIEKRKKMV WFWPEKHEGG VIKEAEDVAA EHISREGTMS HYSFSKGLLP PLGVGATARS SRHIKLRCFI VSPFDPRYRA WDWFLVILVL YTAWASPFEF
101: GFLQTPRAPL SILDNVVNGF FAVDIVLTFF VAFLDKATYL LVDDPKRIAW RYTSTWLIFD VVSTVPYELF GSLLHNTIQG YGIFSMLRLW RLHRVSKCFA
201: RLEKDRKYNY FWIRCTKLLL VSLFVVHCGA CFCYSIAAHY PDPSMTFMAL AEANWKQKSL LIRYVTAMYW SITTFSTTGY GDIHGNNAEE RAFILFYMIF
301: NLGLLAYIIG NMTNLVVHVT SRTRNFRDTI QAASAFAQRN NLPLGLQEQM VAHLSLRYRT DSEGLQQQEI IDSLPKAIRS SISHYLFYEV VDKTYLFHGI
401: SNDLLFQLVS EMKAEYFPPK EDVILRNEAP SDFYIMVTGA VDIIARVNGV DQVVGEAQTG HVFGEVGVLC YRPQLFTVRT KRLSQLLRLN RTAFLNLVQA
501: NVGDGAIIMN NLLQHLKDST DPVMKGILAE TELMLAQGKM DLPLSLCFAA ARGDDLLLHQ LLKRGSNPNE TDKNGRTALH IAASKGSQYC VVLLLEHGAD
601: PNIRDSEGSV PLWEAIIGRH EENAKLLSEN GATLSFDTVG YFSCLAVGQN NLNALKDIVK YGGDISLSDV NGTTALHRAV SEGNLEIVQF LLEKGADMDK
701: PDVYGWTARA LAEHQGHEDI KALFYNQRPV ERKTILVSGT PEIKPLMKHS SEPVMTHHHS REAMPPLARA VSQRRKLSNF KNSLFGIMSA AKTGDEGGAS
801: TRTGISEGVG GVYPARVTIS GEASSSGKVV KLPDSLEELI EIGEKKLGFV ATKILSREGA EIDDIRIIRD GDFLLLLKVS

Arabidopsis Description

AKT5Probable potassium channel AKT5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCX5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.