Factsheet for TraesCS3B01G265500.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

mitochondrion 3
plasma membrane 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, plasma membrane
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G267900.1
TraesCS1B01G278600.1
TraesCS1D01G267800.1
TraesCS2A01G251800.1
TraesCS2B01G271700.1
TraesCS2D01G252600.1
TraesCS3A01G132400.1
TraesCS3A01G233800.1
TraesCS3A01G245200.1
TraesCS3A01G294200.1
TraesCS3A01G362200.1
TraesCS3B01G167100.1
TraesCS3B01G265500.1
TraesCS3B01G274500.1
TraesCS3B01G328800.1
TraesCS3B01G394600.3
TraesCS3D01G148600.1
TraesCS3D01G219600.1
TraesCS3D01G246300.1
TraesCS3D01G294000.1
TraesCS3D01G355900.1
TraesCS4A01G094300.1
TraesCS4A01G200000.1
TraesCS4B01G115400.1
TraesCS4B01G210100.1
TraesCS4D01G113100.1
TraesCS4D01G210900.1
TraesCS5A01G183600.1
TraesCS5A01G225200.1
TraesCS5A01G225300.1
TraesCS5B01G182000.1
TraesCS5B01G223800.1
TraesCS5B01G223900.1
TraesCS5D01G188600.1
TraesCS5D01G232500.1
TraesCS5D01G232600.1
TraesCS6A01G160500.1
TraesCS6B01G081300.1
TraesCS6B01G190900.1
TraesCS6D01G152200.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G26650.1	TraesCS3A01G362200.1	AT1G07430.1	17898163
AT2G26650.1	TraesCS3B01G394600.3	AT1G07430.1	17898163
AT2G26650.1	TraesCS3D01G355900.1	AT1G07430.1	17898163
AT2G26650.1	TraesCS4A01G094300.1	AT1G07430.1	17898163
AT2G26650.1	TraesCS4B01G210100.1	AT1G07430.1	17898163
AT2G26650.1	TraesCS4D01G210900.1	AT1G07430.1	17898163
AT2G26650.1	TraesCS5A01G183600.1	AT1G07430.1	17898163
AT2G26650.1	TraesCS5B01G182000.1	AT1G07430.1	17898163
AT2G26650.1	TraesCS5D01G188600.1	AT1G07430.1	17898163
AT2G26650.1	TraesCS2A01G251800.1	AT1G30270.1	16814720
AT2G26650.1	TraesCS2B01G271700.1	AT1G30270.1	16814720
AT2G26650.1	TraesCS2D01G252600.1	AT1G30270.1	16814720
AT2G26650.1	TraesCS2A01G251800.1	AT1G30270.1	17898163
AT2G26650.1	TraesCS2B01G271700.1	AT1G30270.1	17898163
AT2G26650.1	TraesCS2D01G252600.1	AT1G30270.1	17898163
AT2G26650.1	TraesCS5A01G225300.1	AT2G25090.1	17898163
AT2G26650.1	TraesCS5B01G223900.1	AT2G25090.1	17898163
AT2G26650.1	TraesCS5D01G232600.1	AT2G25090.1	17898163
AT2G26650.1	TraesCS3A01G233800.1	AT2G26650.1	12678562
AT2G26650.1	TraesCS3B01G265500.1	AT2G26650.1	12678562
AT2G26650.1	TraesCS3D01G219600.1	AT2G26650.1	12678562
AT2G26650.1	TraesCS3A01G233800.1	AT2G26650.1	15299147
AT2G26650.1	TraesCS3B01G265500.1	AT2G26650.1	15299147
AT2G26650.1	TraesCS3D01G219600.1	AT2G26650.1	15299147
AT2G26650.1	TraesCS3A01G233800.1	AT2G26650.1	9218788
AT2G26650.1	TraesCS3B01G265500.1	AT2G26650.1	9218788
AT2G26650.1	TraesCS3D01G219600.1	AT2G26650.1	9218788
AT2G26650.1	TraesCS1A01G267900.1	AT4G22200.1	12678562
AT2G26650.1	TraesCS1B01G278600.1	AT4G22200.1	12678562
AT2G26650.1	TraesCS1D01G267800.1	AT4G22200.1	12678562
AT2G26650.1	TraesCS6B01G081300.1	AT4G22200.1	12678562
AT2G26650.1	TraesCS1A01G267900.1	AT4G22200.1	15299147
AT2G26650.1	TraesCS1B01G278600.1	AT4G22200.1	15299147
AT2G26650.1	TraesCS1D01G267800.1	AT4G22200.1	15299147
AT2G26650.1	TraesCS6B01G081300.1	AT4G22200.1	15299147
AT2G26650.1	TraesCS4A01G200000.1	AT4G30960.1	17898163
AT2G26650.1	TraesCS4B01G115400.1	AT4G30960.1	17898163
AT2G26650.1	TraesCS4D01G113100.1	AT4G30960.1	17898163
AT2G26650.1	TraesCS5A01G225200.1	AT4G30960.1	17898163
AT2G26650.1	TraesCS5B01G223800.1	AT4G30960.1	17898163
AT2G26650.1	TraesCS5D01G232500.1	AT4G30960.1	17898163
AT2G26650.1	TraesCS3A01G245200.1	AT4G32650.1	12678562
AT2G26650.1	TraesCS3B01G274500.1	AT4G32650.1	12678562
AT2G26650.1	TraesCS3D01G246300.1	AT4G32650.1	12678562
AT2G26650.1	TraesCS3A01G245200.1	AT4G32650.1	15299147
AT2G26650.1	TraesCS3B01G274500.1	AT4G32650.1	15299147
AT2G26650.1	TraesCS3D01G246300.1	AT4G32650.1	15299147
AT2G26650.1	TraesCS3A01G132400.1	AT5G46240.1	15299147
AT2G26650.1	TraesCS3A01G294200.1	AT5G46240.1	15299147
AT2G26650.1	TraesCS3B01G167100.1	AT5G46240.1	15299147
AT2G26650.1	TraesCS3B01G328800.1	AT5G46240.1	15299147
AT2G26650.1	TraesCS3D01G148600.1	AT5G46240.1	15299147
AT2G26650.1	TraesCS3D01G294000.1	AT5G46240.1	15299147
AT2G26650.1	TraesCS6A01G160500.1	AT5G46240.1	15299147
AT2G26650.1	TraesCS6B01G190900.1	AT5G46240.1	15299147
AT2G26650.1	TraesCS6D01G152200.1	AT5G46240.1	15299147

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G233800.1	Wheat	plasma membrane	98.66	98.66
TraesCS3D01G219600.1	Wheat	plasma membrane	98.33	98.33
HORVU3Hr1G058300.1	Barley	plasma membrane	97.1	96.99
EES03354	Sorghum	plastid	79.71	80.79
Zm00001d044056_P003	Maize	plasma membrane, plastid	78.48	79.37
Os01t0648000-01	Rice	plasma membrane	79.38	76.15
Zm00001d011473_P003	Maize	plastid	76.7	75.36
GSMUA_Achr3P20680_001	Banana	cytosol, nucleus, plasma membrane	62.54	69.86
GSMUA_AchrUn_...	Banana	plasma membrane	60.2	68.27
GSMUA_Achr5P09840_001	Banana	plasma membrane	61.32	67.07
GSMUA_Achr4P09000_001	Banana	plasma membrane	41.69	66.91
VIT_11s0016g04750.t01	Wine grape	plasma membrane	63.43	65.25
GSMUA_Achr4P08990_001	Banana	cytosol, mitochondrion, plasma membrane	58.86	64.71
PGSC0003DMT400002746	Potato	plasma membrane	62.21	63.84
Solyc12g006850.1.1	Tomato	plasma membrane	62.76	63.76
AT2G26650.1	Thale cress	plasma membrane	60.54	63.36
KRH03745	Soybean	plasma membrane	60.76	62.29
KRH56647	Soybean	plasma membrane	61.54	61.81
CDY35373	Canola	cytosol, plasma membrane, vacuole	58.75	61.28
Bra032037.1-P	Field mustard	cytosol	58.64	61.16
VIT_04s0008g04990.t01	Wine grape	mitochondrion	61.2	61.14
CDY55714	Canola	cytosol, plasma membrane, vacuole	58.53	60.98
CDX68851	Canola	plasma membrane	54.29	56.83
KRH61812	Soybean	plasma membrane	55.18	56.38
KRH52490	Soybean	plasma membrane	55.18	56.31
AT2G25600.1	Thale cress	cytosol	55.74	56.31
PGSC0003DMT400091020	Potato	peroxisome, plasma membrane	38.35	56.3
PGSC0003DMT400074787	Potato	cytosol, nucleus, plasma membrane	53.85	56.1
Solyc08g066990.2.1	Tomato	plasma membrane	53.62	55.8
KRH05105	Soybean	cytosol, plasma membrane, vacuole	53.85	55.77
Bra007785.1-P	Field mustard	cytosol	53.62	55.54
TraesCS3B01G328800.1	Wheat	plasma membrane	31.22	55.45
CDX76746	Canola	cytosol	54.18	55.29
KRH16013	Soybean	plasma membrane	53.85	55.2
CDY11516	Canola	cytosol	53.96	55.19
Bra011351.1-P	Field mustard	cytosol	53.73	55.02
CDX75249	Canola	plasma membrane	53.73	55.02
AT4G32500.1	Thale cress	plasma membrane	53.73	54.77
Solyc05g017930.1.1	Tomato	nucleus, plasma membrane	8.58	53.85
Solyc09g005220.1.1	Tomato	cytosol	16.83	52.8
TraesCS6B01G190900.1	Wheat	plasma membrane	36.01	44.55
TraesCS3B01G167100.1	Wheat	plasma membrane	35.34	44.09
TraesCS1B01G278600.1	Wheat	plasma membrane, plastid	37.79	39.19
TraesCS6B01G081300.1	Wheat	plastid	35.9	38.52
TraesCS3B01G274500.1	Wheat	plastid	25.86	35.86
TraesCS2B01G329800.1	Wheat	plasma membrane	26.09	32.37
TraesCS7B01G106800.1	Wheat	cytosol	20.4	31.12
TraesCS7B01G106900.1	Wheat	cytosol, plasma membrane, vacuole	28.65	30.78
TraesCS7B01G106600.1	Wheat	cytosol	23.97	29.29

Protein Annotations

Gene3D:1.10.287.70	Gene3D:1.25.40.20	Gene3D:2.60.120.10	MapMan:24.3.2.2	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	GO:GO:0003674	GO:GO:0005215	GO:GO:0005216	GO:GO:0005249	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0006810	GO:GO:0006811	GO:GO:0006813	GO:GO:0008150
GO:GO:0016020	GO:GO:0055085	InterPro:IPR000595	InterPro:IPR002110	InterPro:IPR014710	InterPro:IPR020683
InterPro:IPR021789	InterPro:IPR036770	InterPro:Ion_trans_dom	InterPro:KHA_dom	InterPro:K_chnl_volt-dep_EAG/ELK/ERG	PFAM:PF00027
PFAM:PF00520	PFAM:PF11834	PFAM:PF12796	PRINTS:PR01415	PRINTS:PR01463	PFscan:PS50042
PFscan:PS50088	PFscan:PS50297	PFscan:PS51490	PANTHER:PTHR10217	PANTHER:PTHR10217:SF504	InterPro:RmlC-like_jellyroll
SMART:SM00100	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF51206	SUPFAM:SSF81324	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS3B01G265500	EnsemblPlants:TraesCS3B01G265500.1	InterPro:cNMP-bd-like	InterPro:cNMP-bd_dom	TIGR:cd00038	TIGR:cd00204
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr3B:+:425376749..425386941

Molecular Weight (calculated)

101003.0 Da

IEP (calculated)

7.917

GRAVY (calculated)

-0.143

Length

897 amino acids

Sequence
(BLAST)

001: MSSRSGAARM RACGPWGEGG SGVVRDAHAL EREMSRDGSH YSLSSGILPS LGARSNRRVK LRRFIISPYD RRYRLWETFL IVLVVYSAWV SPFEFGFIRI
101: PTGGLAATDN AVNAIFAVDI ILTFFVAYLD RLTYLLEDDP KRIAWRYATS WLVLDVASTI PSEIARRMLP SKLRSYGFFN MLRLWRLRRV SSLFARLEKD
201: RHFNYFWVRC AKLICVTLFA VHCAACFYYL LADRYPDPKE TWIGNTMPDF HSKGLWIRYV TSVYWSITTL TTVGYGDYHA ENIREMIFNI FYMFFNLGLT
301: AYLIGNMTNL VVHGTSRTRK YRDTIQAATS FALRNQLPPR LQDQMISHLS LKFRTDSEGL QQQETLDALP KAIRSSISQY LFLNLVQNIY LFQGVSNDLI
401: FQLVSEMKAE YFPPREDVIL QNEAPTDFYI LVSGSVELVE VPNGAEHGAE QVVGVAKSGE VIGEIGVLCY RPQLFTVRTR SLCQLLRMNR TAFLSIVQSN
501: VGDGTIIMNN LIQLLKEQTD GVMVGVLKEI ESMLARGRLD LPITLCFAVT RGDDHLLHQL LKRNLDPNES DQDGRTALHI AASKGNEQCV KLLLEYGADP
601: NARDSEGKVP LWEAVYAKHD TVVHLLVKGG AELSSGDTSL YACIAVEENN IELLKQILKH VIDVNRPSKD GNIPLHRAVC DGNVEMVELL LRHGADIDKQ
701: DSNGWTPRAL AEQQGHEEIQ NLFRSVIAPR KYTSNGRVTP MLLGRFSSDP SMQKVIREDA EQQPSKVFPQ RRKVSFHNSL FGVISSSHPR RETDHLLSRG
801: LAATGGPSYP QVHHNPLIRV TISCPEKGNT AGKLVILPGS IKELLQLGAK KFDMMPTKVL TIEGAEVDEV ELIRDGDHLV LASDDWVPDD TQIGGKN

Best Arabidopsis Sequence Match ( AT2G26650.1 )
(BLAST)

001: MRGGALLCGQ VQDEIEQLSR ESSHFSLSTG ILPSLGARSN RRVKLRRFVV SPYDHKYRIW EAFLVVLVVY TAWVSPFEFG FLRKPRPPLS ITDNIVNAFF
101: AIDIIMTFFV GYLDKSTYLI VDDRKQIAFK YLRSWFLLDL VSTIPSEAAM RISSQSYGLF NMLRLWRLRR VGALFARLEK DRNFNYFWVR CAKLVCVTLF
201: AVHCAACFYY LIAARNSNPA KTWIGANVAN FLEESLWMRY VTSMYWSITT LTTVGYGDLH PVNTKEMIFD IFYMLFNLGL TAYLIGNMTN LVVHGTSRTR
301: NFRDTIQAAS NFAHRNHLPP RLQDQMLAHL CLKYRTDSEG LQQQETLDAL PKAIRSSISH FLFYSLMDKV YLFRGVSNDL LFQLVSEMKA EYFPPKEDVI
401: LQNEAPTDFY ILVNGTADLV DVDTGTESIV REVKAGDIIG EIGVLCYRPQ LFTVRTKRLC QLLRMNRTTF LNIIQANVGD GTIIMNNLLQ HLKEMNDPVM
501: TNVLLEIENM LARGKMDLPL NLCFAAIRED DLLLHQLLKR GLDPNESDNN GRTPLHIAAS KGTLNCVLLL LEYHADPNCR DAEGSVPLWE AMVEGHEKVV
601: KVLLEHGSTI DAGDVGHFAC TAAEQGNLKL LKEIVLHGGD VTRPRATGTS ALHTAVCEEN IEMVKYLLEQ GADVNKQDMH GWTPRDLAEQ QGHEDIKALF
701: REKLHERRVH IETSSSVPIL KTGIRFLGRF TSEPNIRPAS REVSFRIRET RARRKTNNFD NSLFGILANQ SVPKNGLATV DEGRTGNPVR VTISCAEKDD
801: IAGKLVLLPG SFKELLELGS NKFGIVATKV MNKDNNAEID DVDVIRDGDH LIFATDS

Arabidopsis Description

AKT1Potassium channel AKT1 [Source:UniProtKB/Swiss-Prot;Acc:Q38998]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.