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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 2
  • cytosol 3
  • nucleus 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:plastid
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra010263.1-P
Bra010783.1-P
Bra011236.1-P
Bra011367.1-P
Bra013599.1-P
Bra015579.1-P
Bra017567.1-P
Bra024032.1-P
Bra025028.1-P
Bra030455.1-P
Bra031574.1-P
Bra032037.1-P
Bra032042.1-P
Bra032374.1-P
Bra037049.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G26650.1 Bra015579.1-P AT1G07430.1 17898163
AT2G26650.1 Bra030455.1-P AT1G07430.1 17898163
AT2G26650.1 Bra031574.1-P AT1G07430.1 17898163
AT2G26650.1 Bra010783.1-P AT1G30270.1 16814720
AT2G26650.1 Bra032374.1-P AT1G30270.1 16814720
AT2G26650.1 Bra010783.1-P AT1G30270.1 17898163
AT2G26650.1 Bra032374.1-P AT1G30270.1 17898163
AT2G26650.1 Bra032042.1-P AT2G25090.1 17898163
AT2G26650.1 Bra032037.1-P AT2G26650.1 12678562
AT2G26650.1 Bra032037.1-P AT2G26650.1 15299147
AT2G26650.1 Bra032037.1-P AT2G26650.1 9218788
AT2G26650.1 Bra013599.1-P AT4G22200.1 12678562
AT2G26650.1 Bra013599.1-P AT4G22200.1 15299147
AT2G26650.1 Bra010263.1-P AT4G30960.1 17898163
AT2G26650.1 Bra011236.1-P AT4G30960.1 17898163
AT2G26650.1 Bra024032.1-P AT4G30960.1 17898163
AT2G26650.1 Bra011367.1-P AT4G32650.1 12678562
AT2G26650.1 Bra037049.1-P AT4G32650.1 12678562
AT2G26650.1 Bra011367.1-P AT4G32650.1 15299147
AT2G26650.1 Bra037049.1-P AT4G32650.1 15299147
AT2G26650.1 Bra017567.1-P AT5G46240.1 15299147
AT2G26650.1 Bra025028.1-P AT5G46240.1 15299147
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY35373 Canola cytosol, plasma membrane, vacuole 99.77 99.77
CDY55714 Canola cytosol, plasma membrane, vacuole 98.49 98.37
AT2G26650.1 Thale cress plasma membrane 89.07 89.38
PGSC0003DMT400002746 Potato plasma membrane 70.7 69.57
Solyc12g006850.1.1 Tomato plasma membrane 71.16 69.31
VIT_11s0016g04750.t01 Wine grape plasma membrane 70.12 69.15
KRH03745 Soybean plasma membrane 70.23 69.03
KRH56647 Soybean plasma membrane 70.35 67.75
GSMUA_Achr3P20680_001 Banana cytosol, nucleus, plasma membrane 61.51 65.88
GSMUA_AchrUn_... Banana plasma membrane 59.77 64.98
GSMUA_Achr4P09000_001 Banana plasma membrane 40.81 62.79
GSMUA_Achr5P09840_001 Banana plasma membrane 59.53 62.44
GSMUA_Achr4P08990_001 Banana cytosol, mitochondrion, plasma membrane 58.14 61.27
Zm00001d044056_P003 Maize plasma membrane, plastid 61.28 59.41
EES03354 Sorghum plastid 61.05 59.32
TraesCS3D01G219600.1 Wheat plasma membrane 61.63 59.09
TraesCS3B01G265500.1 Wheat plasma membrane 61.16 58.64
TraesCS3A01G233800.1 Wheat plasma membrane 61.16 58.64
HORVU3Hr1G058300.1 Barley plasma membrane 61.05 58.46
Zm00001d011473_P003 Maize plastid 60.23 56.74
Bra007785.1-P Field mustard cytosol 56.4 56.0
Os01t0648000-01 Rice plasma membrane 60.81 55.94
Bra011351.1-P Field mustard cytosol 56.74 55.71
Solyc05g017930.1.1 Tomato nucleus, plasma membrane 8.84 53.15
Bra017567.1-P Field mustard plasma membrane 37.21 48.71
Bra025028.1-P Field mustard cytosol, endoplasmic reticulum, plasma membrane 37.21 48.05
Bra013296.1-P Field mustard plasma membrane 38.02 47.6
Bra021012.1-P Field mustard plasma membrane 34.65 41.85
Bra011367.1-P Field mustard plastid 30.7 40.55
Bra037049.1-P Field mustard plastid 30.35 40.47
Bra013599.1-P Field mustard cytosol 38.14 38.05
Bra001068.1-P Field mustard plasma membrane 28.14 31.76
Bra040606.1-P Field mustard cytosol, plasma membrane, vacuole 29.65 30.76
Bra036395.1-P Field mustard cytosol 29.19 30.72
Bra021279.1-P Field mustard nucleus 12.33 18.53
Protein Annotations
Gene3D:1.10.287.70Gene3D:1.25.40.20Gene3D:2.60.120.10MapMan:24.3.2.2InterPro:Ankyrin_rptInterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sfEnsemblPlantsGene:Bra032037EnsemblPlants:Bra032037.1EnsemblPlants:Bra032037.1-PGO:GO:0003674GO:GO:0005215
GO:GO:0005216GO:GO:0005242GO:GO:0005244GO:GO:0005249GO:GO:0005267GO:GO:0005488
GO:GO:0005515GO:GO:0005575GO:GO:0006810GO:GO:0006811GO:GO:0006813GO:GO:0006950
GO:GO:0007275GO:GO:0008150GO:GO:0009414GO:GO:0009628GO:GO:0009651GO:GO:0009653
GO:GO:0009987GO:GO:0010107GO:GO:0016020GO:GO:0016021GO:GO:0016049GO:GO:0030154
GO:GO:0034765GO:GO:0040007GO:GO:0042802GO:GO:0048767GO:GO:0055085GO:GO:0071805
GO:GO:0090333InterPro:IPR000595InterPro:IPR002110InterPro:IPR014710InterPro:IPR020683InterPro:IPR021789
InterPro:IPR036770InterPro:Ion_trans_domInterPro:KHA_domInterPro:K_chnl_volt-dep_EAG/ELK/ERGUniProt:M4ETA7PFAM:PF00027
PFAM:PF00520PFAM:PF11834PFAM:PF12796PRINTS:PR01415PRINTS:PR01463PFscan:PS50042
PFscan:PS50088PFscan:PS50297PFscan:PS51490PANTHER:PTHR10217PANTHER:PTHR10217:SF504InterPro:RmlC-like_jellyroll
SMART:SM00100SMART:SM00248SUPFAM:SSF48403SUPFAM:SSF51206SUPFAM:SSF81324TMHMM:TMhelix
UniParc:UPI0002544EECInterPro:cNMP-bd-likeInterPro:cNMP-bd_dom:::
Description
AT2G26650 (E=0.0) AKT1, ATAKT1 | AKT1 (ARABIDOPSIS K TRANSPORTER 1); cyclic nucleotide binding / inward rectifier potassium channel
Coordinates
chrA04:+:11325883..11330957
Molecular Weight (calculated)
97445.6 Da
IEP (calculated)
7.904
GRAVY (calculated)
-0.168
Length
860 amino acids
Sequence
(BLAST)
001: MGSLRSRGRH EIDEIEQLSR ESSHFSLSTG ILPSLGARSN RRIKLKRFVV SPYNHKYRIW EAFLEVLVVY TAWVSPFEFG FLRKPRPPLS ITDNIVNGFF
101: AIDIIMTFFV GYLDKSTYLL VDDRKMIAFK YLRSWFVLDL ISTIPSEVAM KISSQSYGLF NMLRLWRVRR VGALFARLEK DRNFNYFWVR CAKLVCVTIF
201: AVHCAACFYY LIAARHHDPA KTWIGASNAN FHDESLWMRY VTSMYWSITT LTTVGYGDLH PVNTKEMIFD IFYMLFNLGL TAYLIGNMTN LVVHGTSRTR
301: NFRDTIQAAS NFARRNHLPP RLQDQMLAHL CLKYRTDSEG LQQQETLDAL PKAIRSSISH FLFYSLMDKV YLFRGVSNDL LFQLVSEMKA EYFPPKEDVI
401: LQNEAPTDFY ILVNGTADLV VQDGGTENAV KEVKAGDIIG EIGVLCYKPQ LFTVRTKRLC QLLRMNRTTF LNIIQANVGD GTIIMNNLLQ HLKEMNDPVM
501: ASVLLETENM LAKGKLDLPI NLFFAAMRED DLLLHQLLKR GQDPNESDNN GRTPLHIAAS KGSLNCVLHL LEYHADPNCR DAEGNIPLWE AMVEGHEKIV
601: KVLLEHGATI EAGDVGHFAC TAAEQGNLKL LKEIVRHGGD VTRPRATGTS ALHAAVCEGN IEMVKYLLEQ GADVNKQDMH NWTAKDLADQ QGHEEIKALF
701: REKNNERTHI ESSASVPILK TARRFLGRGT SEPNIRPPSR EVSFRITETR PRRKTNNFDN SLFGILASQN VQKNGLATVD ESRVVNQVRV TISCKEKDEV
801: AVKLVLLPGS FKELLELGSS KCGIVAARVM SKDQNMAEID DVDVIRDGDH LIFATDSSQS
Best Arabidopsis Sequence Match ( AT2G26650.1 )
(BLAST)
001: MRGGALLCGQ VQDEIEQLSR ESSHFSLSTG ILPSLGARSN RRVKLRRFVV SPYDHKYRIW EAFLVVLVVY TAWVSPFEFG FLRKPRPPLS ITDNIVNAFF
101: AIDIIMTFFV GYLDKSTYLI VDDRKQIAFK YLRSWFLLDL VSTIPSEAAM RISSQSYGLF NMLRLWRLRR VGALFARLEK DRNFNYFWVR CAKLVCVTLF
201: AVHCAACFYY LIAARNSNPA KTWIGANVAN FLEESLWMRY VTSMYWSITT LTTVGYGDLH PVNTKEMIFD IFYMLFNLGL TAYLIGNMTN LVVHGTSRTR
301: NFRDTIQAAS NFAHRNHLPP RLQDQMLAHL CLKYRTDSEG LQQQETLDAL PKAIRSSISH FLFYSLMDKV YLFRGVSNDL LFQLVSEMKA EYFPPKEDVI
401: LQNEAPTDFY ILVNGTADLV DVDTGTESIV REVKAGDIIG EIGVLCYRPQ LFTVRTKRLC QLLRMNRTTF LNIIQANVGD GTIIMNNLLQ HLKEMNDPVM
501: TNVLLEIENM LARGKMDLPL NLCFAAIRED DLLLHQLLKR GLDPNESDNN GRTPLHIAAS KGTLNCVLLL LEYHADPNCR DAEGSVPLWE AMVEGHEKVV
601: KVLLEHGSTI DAGDVGHFAC TAAEQGNLKL LKEIVLHGGD VTRPRATGTS ALHTAVCEEN IEMVKYLLEQ GADVNKQDMH GWTPRDLAEQ QGHEDIKALF
701: REKLHERRVH IETSSSVPIL KTGIRFLGRF TSEPNIRPAS REVSFRIRET RARRKTNNFD NSLFGILANQ SVPKNGLATV DEGRTGNPVR VTISCAEKDD
801: IAGKLVLLPG SFKELLELGS NKFGIVATKV MNKDNNAEID DVDVIRDGDH LIFATDS
Arabidopsis Description
AKT1Potassium channel AKT1 [Source:UniProtKB/Swiss-Prot;Acc:Q38998]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.