CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH03068
KRH03745
KRH11194
KRH12829
KRH12907
KRH21063
KRH26375
KRH37794
KRH37909
KRH44060
KRH44805
KRH52332
KRH52547
KRH56647
KRH58233
KRH61670
KRH61886
KRH72285

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G26650.1	KRH12829	AT1G30270.1	16814720
AT2G26650.1	KRH37794	AT1G30270.1	16814720
AT2G26650.1	KRH12829	AT1G30270.1	17898163
AT2G26650.1	KRH37794	AT1G30270.1	17898163
AT2G26650.1	KRH52332	AT2G25090.1	17898163
AT2G26650.1	KRH61670	AT2G25090.1	17898163
AT2G26650.1	KRH03745	AT2G26650.1	12678562
AT2G26650.1	KRH56647	AT2G26650.1	12678562
AT2G26650.1	KRH03745	AT2G26650.1	15299147
AT2G26650.1	KRH56647	AT2G26650.1	15299147
AT2G26650.1	KRH03745	AT2G26650.1	9218788
AT2G26650.1	KRH56647	AT2G26650.1	9218788
AT2G26650.1	KRH26375	AT4G22200.1	12678562
AT2G26650.1	KRH44060	AT4G22200.1	12678562
AT2G26650.1	KRH26375	AT4G22200.1	15299147
AT2G26650.1	KRH44060	AT4G22200.1	15299147
AT2G26650.1	KRH03068	AT4G30960.1	17898163
AT2G26650.1	KRH12907	AT4G30960.1	17898163
AT2G26650.1	KRH37909	AT4G30960.1	17898163
AT2G26650.1	KRH72285	AT4G30960.1	17898163
AT2G26650.1	KRH52547	AT4G32650.1	12678562
AT2G26650.1	KRH61886	AT4G32650.1	12678562
AT2G26650.1	KRH52547	AT4G32650.1	15299147
AT2G26650.1	KRH61886	AT4G32650.1	15299147
AT2G26650.1	KRH11194	AT5G46240.1	15299147
AT2G26650.1	KRH21063	AT5G46240.1	15299147
AT2G26650.1	KRH44805	AT5G46240.1	15299147
AT2G26650.1	KRH58233	AT5G46240.1	15299147

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH03745	Soybean	plasma membrane	93.62	95.54
VIT_11s0016g04750.t01	Wine grape	plasma membrane	75.03	76.83
Solyc12g006850.1.1	Tomato	plasma membrane	71.78	72.59
PGSC0003DMT400002746	Potato	plasma membrane	70.44	71.97
AT2G26650.1	Thale cress	plasma membrane	68.53	71.41
CDY35373	Canola	cytosol, plasma membrane, vacuole	67.97	70.58
Bra032037.1-P	Field mustard	cytosol	67.75	70.35
CDY55714	Canola	cytosol, plasma membrane, vacuole	67.75	70.27
GSMUA_Achr3P20680_001	Banana	cytosol, nucleus, plasma membrane	60.47	67.25
GSMUA_AchrUn_...	Banana	plasma membrane	58.34	65.87
GSMUA_Achr5P09840_001	Banana	plasma membrane	60.25	65.61
GSMUA_Achr4P09000_001	Banana	plasma membrane	39.75	63.51
EES03354	Sorghum	plastid	62.26	62.82
Zm00001d044056_P003	Maize	plasma membrane, plastid	62.15	62.57
GSMUA_Achr4P08990_001	Banana	cytosol, mitochondrion, plasma membrane	57.0	62.38
TraesCS3D01G219600.1	Wheat	plasma membrane	61.93	61.65
TraesCS3B01G265500.1	Wheat	plasma membrane	61.81	61.54
TraesCS3A01G233800.1	Wheat	plasma membrane	61.81	61.54
HORVU3Hr1G058300.1	Barley	plasma membrane	61.59	61.25
KRH05105	Soybean	cytosol, plasma membrane, vacuole	58.68	60.51
Zm00001d011473_P003	Maize	plastid	60.92	59.58
Os01t0648000-01	Rice	plasma membrane	62.15	59.36
KRH16013	Soybean	plasma membrane	57.78	58.97
KRH61812	Soybean	plasma membrane	57.56	58.54
KRH52490	Soybean	plasma membrane	57.11	58.02
Solyc05g017930.1.1	Tomato	nucleus, plasma membrane	9.07	56.64
KRH44805	Soybean	plasma membrane	39.19	48.08
KRH11194	Soybean	plasma membrane	40.43	46.46
KRH21063	Soybean	plasma membrane	39.87	45.82
KRH61886	Soybean	plasma membrane	29.9	42.72
KRH44060	Soybean	cytosol	38.19	40.89
KRH26375	Soybean	cytosol	37.96	40.79
KRH52547	Soybean	cytosol	25.64	38.55
KRH58233	Soybean	cytosol, extracellular, plasma membrane	9.41	37.84
KRH72964	Soybean	cytosol	30.01	31.57
KRH17312	Soybean	cytosol, plastid	30.01	31.53
KRH60563	Soybean	mitochondrion, plasma membrane	26.65	30.55

Protein Annotations

Gene3D:1.10.287.70	Gene3D:1.20.120.350	Gene3D:1.25.40.20	EntrezGene:100819491	Gene3D:2.60.120.10	MapMan:24.3.2.2
EMBL:ACUP02002791	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	EnsemblPlantsGene:GLYMA_05G010600	GO:GO:0003674
GO:GO:0005215	GO:GO:0005216	GO:GO:0005244	GO:GO:0005249	GO:GO:0005267	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810
GO:GO:0006811	GO:GO:0006813	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0034765	GO:GO:0042391	GO:GO:0055085	GO:GO:0071805	UniProt:I1K1D3	InterPro:IPR000595
InterPro:IPR002110	InterPro:IPR014710	InterPro:IPR020683	InterPro:IPR021789	InterPro:IPR027359	InterPro:IPR036770
InterPro:Ion_trans_dom	InterPro:KHA_dom	EnsemblPlants:KRH56647	ProteinID:KRH56647	ProteinID:KRH56647.1	InterPro:K_chnl_volt-dep_EAG/ELK/ERG
PFAM:PF00027	PFAM:PF00520	PFAM:PF11834	PFAM:PF12796	PRINTS:PR01463	PFscan:PS50042
PFscan:PS50088	PFscan:PS50297	PFscan:PS51490	PANTHER:PTHR10217	PANTHER:PTHR10217:SF504	InterPro:RmlC-like_jellyroll
SMART:SM00100	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF51206	SUPFAM:SSF81324	TMHMM:TMhelix
UniParc:UPI0002948E87	InterPro:Volt_channel_dom_sf	InterPro:cNMP-bd-like	InterPro:cNMP-bd_dom	SEG:seg	:

Description

hypothetical protein

Coordinates

chr5:+:931676..938586

Molecular Weight (calculated)

100168.0 Da

IEP (calculated)

7.088

GRAVY (calculated)

-0.107

Length

893 amino acids

Sequence
(BLAST)

001: MLVSMSVCGQ DEIELSRDGS HYSLSTGILP SLGAKSNRRL KLKPFIISPY DRRYRIWETF LVILVVYTAW VSPFEFGFLK KPQAPLSITD NIVNGFFFVD
101: IVLTFFVAYI DKSTYLIVDD RKQIAWKYAR TWLAFDVISI IPSELVQKIS PSPLQSYGLF NMLRLWRLRR VSALFSRLEK DKNYNYFWVR CAKLIAVTLF
201: AVHCAACFYY LIAARYHDPK KTWIGATMDN FLERSLWSRY VTSIYWSITT LTTVGYGDLH PVNSREMIFD IFYMLFNLGL TAYLIGNMTN LVVHGTSRTR
301: KFRDTIQAAS NFAQRNQLPH RLQDQMLAHL CLKYRTDSEG LQQQETLDSL PKAIRSSISH YLFYSLIDKV YLFHGVSNDL LFQLVSEMKA EYFPPKEDVI
401: LQNEAPTDFY ILVTGAVELL VLKNGVEQVV GEAKTGDLCG EIGVLCYKPQ LFTVRTKRLS QLLRLNRTSF LNIVQANVGD GTIIMNNLLQ HLKEINDPIM
501: EGVLVDIENM LARGRMDLPV SVCFAAARGD DLLLHQLLKR GMDPNESDNN RRTALHIAAS QGKENCVSLL LDYGADPNIR DLEGNVPLWE AIVEGHESMS
601: KLLSENGANL QCGDVGQFAC NAVEQNSLNL LKEIMRYGGD ITLPNSNTGT TALHVAVSEG NVEIVKFLLD HGASIDKPDK HGWTPRDLAD QQAHTEIKAL
701: FDSTGEPKVQ SSFAIPERNS KIRYLGRFTS EPTMPLPLDG SFHESQSQSQ SQSRPRRRSN NYHNSLFGIM SAVHNGEKDL LSAVDMNNNA RNGMKSSSAS
801: SSALGPTRVI ISCPEKGEVV GKLVLLPGSF QELVEIGAKK FGFYPNKVVC KDGGEIEDLE VIRDGDHLVF LGASGVLESN CPAPAPLTNG VHI

Best Arabidopsis Sequence Match ( AT2G26650.1 )
(BLAST)

001: MRGGALLCGQ VQDEIEQLSR ESSHFSLSTG ILPSLGARSN RRVKLRRFVV SPYDHKYRIW EAFLVVLVVY TAWVSPFEFG FLRKPRPPLS ITDNIVNAFF
101: AIDIIMTFFV GYLDKSTYLI VDDRKQIAFK YLRSWFLLDL VSTIPSEAAM RISSQSYGLF NMLRLWRLRR VGALFARLEK DRNFNYFWVR CAKLVCVTLF
201: AVHCAACFYY LIAARNSNPA KTWIGANVAN FLEESLWMRY VTSMYWSITT LTTVGYGDLH PVNTKEMIFD IFYMLFNLGL TAYLIGNMTN LVVHGTSRTR
301: NFRDTIQAAS NFAHRNHLPP RLQDQMLAHL CLKYRTDSEG LQQQETLDAL PKAIRSSISH FLFYSLMDKV YLFRGVSNDL LFQLVSEMKA EYFPPKEDVI
401: LQNEAPTDFY ILVNGTADLV DVDTGTESIV REVKAGDIIG EIGVLCYRPQ LFTVRTKRLC QLLRMNRTTF LNIIQANVGD GTIIMNNLLQ HLKEMNDPVM
501: TNVLLEIENM LARGKMDLPL NLCFAAIRED DLLLHQLLKR GLDPNESDNN GRTPLHIAAS KGTLNCVLLL LEYHADPNCR DAEGSVPLWE AMVEGHEKVV
601: KVLLEHGSTI DAGDVGHFAC TAAEQGNLKL LKEIVLHGGD VTRPRATGTS ALHTAVCEEN IEMVKYLLEQ GADVNKQDMH GWTPRDLAEQ QGHEDIKALF
701: REKLHERRVH IETSSSVPIL KTGIRFLGRF TSEPNIRPAS REVSFRIRET RARRKTNNFD NSLFGILANQ SVPKNGLATV DEGRTGNPVR VTISCAEKDD
801: IAGKLVLLPG SFKELLELGS NKFGIVATKV MNKDNNAEID DVDVIRDGDH LIFATDS

Arabidopsis Description

AKT1Potassium channel AKT1 [Source:UniProtKB/Swiss-Prot;Acc:Q38998]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.