CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
plasma membrane 3
extracellular 1
golgi 1
endoplasmic reticulum 1
vacuole 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH03068
KRH03745
KRH11194
KRH12829
KRH12907
KRH21063
KRH26375
KRH37794
KRH37909
KRH44060
KRH44805
KRH52332
KRH52547
KRH56647
KRH58233
KRH61670
KRH61886
KRH72285

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G26650.1	KRH12829	AT1G30270.1	16814720
AT2G26650.1	KRH37794	AT1G30270.1	16814720
AT2G26650.1	KRH12829	AT1G30270.1	17898163
AT2G26650.1	KRH37794	AT1G30270.1	17898163
AT2G26650.1	KRH52332	AT2G25090.1	17898163
AT2G26650.1	KRH61670	AT2G25090.1	17898163
AT2G26650.1	KRH03745	AT2G26650.1	12678562
AT2G26650.1	KRH56647	AT2G26650.1	12678562
AT2G26650.1	KRH03745	AT2G26650.1	15299147
AT2G26650.1	KRH56647	AT2G26650.1	15299147
AT2G26650.1	KRH03745	AT2G26650.1	9218788
AT2G26650.1	KRH56647	AT2G26650.1	9218788
AT2G26650.1	KRH26375	AT4G22200.1	12678562
AT2G26650.1	KRH44060	AT4G22200.1	12678562
AT2G26650.1	KRH26375	AT4G22200.1	15299147
AT2G26650.1	KRH44060	AT4G22200.1	15299147
AT2G26650.1	KRH03068	AT4G30960.1	17898163
AT2G26650.1	KRH12907	AT4G30960.1	17898163
AT2G26650.1	KRH37909	AT4G30960.1	17898163
AT2G26650.1	KRH72285	AT4G30960.1	17898163
AT2G26650.1	KRH52547	AT4G32650.1	12678562
AT2G26650.1	KRH61886	AT4G32650.1	12678562
AT2G26650.1	KRH52547	AT4G32650.1	15299147
AT2G26650.1	KRH61886	AT4G32650.1	15299147
AT2G26650.1	KRH11194	AT5G46240.1	15299147
AT2G26650.1	KRH21063	AT5G46240.1	15299147
AT2G26650.1	KRH44805	AT5G46240.1	15299147
AT2G26650.1	KRH58233	AT5G46240.1	15299147

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH56647	Soybean	plasma membrane	95.54	93.62
VIT_11s0016g04750.t01	Wine grape	plasma membrane	76.34	76.61
Solyc12g006850.1.1	Tomato	plasma membrane	72.34	71.69
AT2G26650.1	Thale cress	plasma membrane	69.94	71.41
PGSC0003DMT400002746	Potato	plasma membrane	71.09	71.17
CDY35373	Canola	cytosol, plasma membrane, vacuole	69.26	70.47
Bra032037.1-P	Field mustard	cytosol	69.03	70.23
CDY55714	Canola	cytosol, plasma membrane, vacuole	69.03	70.15
GSMUA_Achr3P20680_001	Banana	cytosol, nucleus, plasma membrane	61.94	67.5
GSMUA_Achr5P09840_001	Banana	plasma membrane	61.94	66.1
GSMUA_AchrUn_...	Banana	plasma membrane	59.54	65.87
GSMUA_Achr4P09000_001	Banana	plasma membrane	40.46	63.33
GSMUA_Achr4P08990_001	Banana	cytosol, mitochondrion, plasma membrane	58.06	62.25
EES03354	Sorghum	plastid	62.51	61.81
Zm00001d044056_P003	Maize	plasma membrane, plastid	62.4	61.56
TraesCS3D01G219600.1	Wheat	plasma membrane	62.51	60.98
TraesCS3A01G233800.1	Wheat	plasma membrane	62.51	60.98
TraesCS3B01G265500.1	Wheat	plasma membrane	62.29	60.76
HORVU3Hr1G058300.1	Barley	plasma membrane	62.17	60.58
KRH05105	Soybean	cytosol, plasma membrane, vacuole	59.54	60.16
KRH16013	Soybean	plasma membrane	59.09	59.09
Zm00001d011473_P003	Maize	plastid	61.26	58.71
Os01t0648000-01	Rice	plasma membrane	62.51	58.5
KRH61812	Soybean	plasma membrane	58.63	58.43
KRH52490	Soybean	plasma membrane	58.29	58.02
Solyc05g017930.1.1	Tomato	nucleus, plasma membrane	9.14	55.94
KRH44805	Soybean	plasma membrane	39.43	47.39
KRH11194	Soybean	plasma membrane	40.57	45.69
KRH21063	Soybean	plasma membrane	40.0	45.05
KRH61886	Soybean	plasma membrane	30.17	42.24
KRH26375	Soybean	cytosol	38.74	40.79
KRH44060	Soybean	cytosol	38.74	40.65
KRH52547	Soybean	cytosol	25.83	38.05
KRH58233	Soybean	cytosol, extracellular, plasma membrane	9.49	37.39
KRH17312	Soybean	cytosol, plastid	30.06	30.94
KRH72964	Soybean	cytosol	29.94	30.86
KRH60563	Soybean	mitochondrion, plasma membrane	26.74	30.04

Protein Annotations

Gene3D:1.10.287.70	Gene3D:1.20.120.350	Gene3D:1.25.40.20	Gene3D:2.60.120.10	MapMan:24.3.2.2	EMBL:ACUP02010360
InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	EnsemblPlantsGene:GLYMA_17G118300	GO:GO:0003674	GO:GO:0005215
GO:GO:0005216	GO:GO:0005244	GO:GO:0005249	GO:GO:0005267	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006811
GO:GO:0006813	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0034765
GO:GO:0042391	GO:GO:0055085	GO:GO:0071805	UniProt:I1MUD0	InterPro:IPR000595	InterPro:IPR002110
InterPro:IPR014710	InterPro:IPR020683	InterPro:IPR021789	InterPro:IPR027359	InterPro:IPR036770	InterPro:Ion_trans_dom
InterPro:KHA_dom	EnsemblPlants:KRH03745	ProteinID:KRH03745	ProteinID:KRH03745.1	InterPro:K_chnl_volt-dep_EAG/ELK/ERG	PFAM:PF00027
PFAM:PF00520	PFAM:PF11834	PFAM:PF12796	PFAM:PF13857	PRINTS:PR01463	PFscan:PS50042
PFscan:PS50088	PFscan:PS50297	PFscan:PS51490	PANTHER:PTHR10217	PANTHER:PTHR10217:SF504	InterPro:RmlC-like_jellyroll
SMART:SM00100	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF51206	SUPFAM:SSF81324	TMHMM:TMhelix
UniParc:UPI000233E390	InterPro:Volt_channel_dom_sf	InterPro:cNMP-bd-like	InterPro:cNMP-bd_dom	SEG:seg	:

Description

hypothetical protein

Coordinates

chr17:+:9362502..9369383

Molecular Weight (calculated)

98113.1 Da

IEP (calculated)

7.457

GRAVY (calculated)

-0.102

Length

875 amino acids

Sequence
(BLAST)

001: MLVCGQDEID LSRDGSHYSL STGILPSLGA KSNRRLKLKP FIVSPYDRRY RIWETFLVIL VVYTAWVSPF EFGFLKKPQA PLSITDNIVN GFFFVDIVLT
101: FFVAYIDKSS YLIVDDRKQI AWKYARTWLS FDVISIIPSE LVQKISPSPL QSYGLFNMLR LWRLRRVGAL FSRLEKDKNY NYFWVRCAKL IAVTLFAVHC
201: AACFYYLIAA RYHDPKKTWI GATMDNFLEH SLWSRYVTSI YWSITTLTTV GYGDLHPVNS REMIFDVFYM LFNLGLTAYL IGNMTNLVVH GTSRTRKFRD
301: TIQAASNFAQ RNQLPHRLQD QMLAHLCLKY RTDSEGLQQQ ETLDSLPKAI RSSISHYLFY SLIDKVYLFH GVSNDLLFQL VSEMKAEYFP PKEDVILQNE
401: APTDFYILVT GAVELLVLKN GAEQVVGEAK TGDLCGEIGV LCYKPQLFTV RTKRLSQLLR LNRTTFLNIV QANVGDGTII MNNLLQHLKE INDPIMEGVL
501: VDIENMLARG RMDLPVSVCF AAARGDDLLL HQLLKRGMDP NESDNNRRTA LHIAASQGKQ NCVLLLLDYG ADPNIRDLEG NVPLWEAIVG GHESMSKLLS
601: ENGANLQCGD VGQFACTAAE QNSLNLLKEI MRYGGDITLP NSSNTGTTAL HVAVSEGNVE TVKFLLDHGA SIDMPDKHGW TPRDLADQQA HTEIKALFDS
701: IGEPKVHSSV AIPVRNSKIK YLGRFTSEPT MTLPLDGSFH GTDGSWSQNQ SQNQSRPRRR SNNYHNSLFG ILSAAHNGEK YLLSAVDMNN NARNGMKSSS
801: AVGPTRVIIS CPEKGEVVGK LVLLPGSFQE LVEIGAKKFG FYPNKVVCKD GGEIEDIEII RDGDHLVFLG ASGGC

Best Arabidopsis Sequence Match ( AT2G26650.1 )
(BLAST)

001: MRGGALLCGQ VQDEIEQLSR ESSHFSLSTG ILPSLGARSN RRVKLRRFVV SPYDHKYRIW EAFLVVLVVY TAWVSPFEFG FLRKPRPPLS ITDNIVNAFF
101: AIDIIMTFFV GYLDKSTYLI VDDRKQIAFK YLRSWFLLDL VSTIPSEAAM RISSQSYGLF NMLRLWRLRR VGALFARLEK DRNFNYFWVR CAKLVCVTLF
201: AVHCAACFYY LIAARNSNPA KTWIGANVAN FLEESLWMRY VTSMYWSITT LTTVGYGDLH PVNTKEMIFD IFYMLFNLGL TAYLIGNMTN LVVHGTSRTR
301: NFRDTIQAAS NFAHRNHLPP RLQDQMLAHL CLKYRTDSEG LQQQETLDAL PKAIRSSISH FLFYSLMDKV YLFRGVSNDL LFQLVSEMKA EYFPPKEDVI
401: LQNEAPTDFY ILVNGTADLV DVDTGTESIV REVKAGDIIG EIGVLCYRPQ LFTVRTKRLC QLLRMNRTTF LNIIQANVGD GTIIMNNLLQ HLKEMNDPVM
501: TNVLLEIENM LARGKMDLPL NLCFAAIRED DLLLHQLLKR GLDPNESDNN GRTPLHIAAS KGTLNCVLLL LEYHADPNCR DAEGSVPLWE AMVEGHEKVV
601: KVLLEHGSTI DAGDVGHFAC TAAEQGNLKL LKEIVLHGGD VTRPRATGTS ALHTAVCEEN IEMVKYLLEQ GADVNKQDMH GWTPRDLAEQ QGHEDIKALF
701: REKLHERRVH IETSSSVPIL KTGIRFLGRF TSEPNIRPAS REVSFRIRET RARRKTNNFD NSLFGILANQ SVPKNGLATV DEGRTGNPVR VTISCAEKDD
801: IAGKLVLLPG SFKELLELGS NKFGIVATKV MNKDNNAEID DVDVIRDGDH LIFATDS

Arabidopsis Description

AKT1Potassium channel AKT1 [Source:UniProtKB/Swiss-Prot;Acc:Q38998]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.