CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 3
plasma membrane 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH03745
KRH08028
KRH26375
KRH28825
KRH44060
KRH56647
KRH69754
KRH76629

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G32650.1	KRH03745	AT2G26650.1	12678562
AT4G32650.1	KRH56647	AT2G26650.1	12678562
AT4G32650.1	KRH03745	AT2G26650.1	15299147
AT4G32650.1	KRH56647	AT2G26650.1	15299147
AT4G32650.1	KRH08028	AT3G51300.1	15299147
AT4G32650.1	KRH28825	AT3G51300.1	15299147
AT4G32650.1	KRH69754	AT3G51300.1	15299147
AT4G32650.1	KRH76629	AT3G51300.1	15299147
AT4G32650.1	KRH26375	AT4G22200.1	12678562
AT4G32650.1	KRH44060	AT4G22200.1	12678562

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH61886	Soybean	plasma membrane	90.07	85.6
VIT_04s0008g04510.t01	Wine grape	cytosol, mitochondrion, peroxisome, plasma membrane	60.77	57.21
PGSC0003DMT400037608	Potato	plastid	57.24	54.57
Solyc01g010080.2.1	Tomato	plastid	56.4	53.34
PGSC0003DMT400065964	Potato	cytosol, plastid	55.22	51.98
Solyc08g068000.1.1	Tomato	plasma membrane	56.06	51.79
GSMUA_Achr5P09770_001	Banana	plasma membrane	52.36	47.63
AT4G32650.1	Thale cress	plastid	52.69	47.28
GSMUA_Achr1P05260_001	Banana	plasma membrane	50.17	47.08
Os01t0718700-00	Rice	endoplasmic reticulum, plasma membrane	28.28	45.04
HORVU3Hr1G068040.1	Barley	plasma membrane	31.82	44.16
Os04t0117500-00	Rice	plasma membrane	20.2	41.96
TraesCS3D01G246300.1	Wheat	plastid	41.41	41.34
Os06t0254200-00	Rice	plasma membrane, plastid	41.58	40.49
TraesCS3A01G245200.1	Wheat	mitochondrion	40.57	40.1
Zm00001d011723_P002	Maize	cytosol, plasma membrane, plastid	41.41	38.44
OQU87429	Sorghum	mitochondrion	38.89	36.96
Zm00001d011729_P002	Maize	cytosol	39.23	36.81
EES07044	Sorghum	cytosol, mitochondrion, peroxisome, plasma membrane	36.87	36.44
Zm00001d016987_P001	Maize	plasma membrane	35.86	36.16
TraesCS3B01G274500.1	Wheat	plastid	36.53	33.54
KRH44805	Soybean	plasma membrane	38.89	31.73
KRH21063	Soybean	plasma membrane	37.37	28.57
KRH11194	Soybean	plasma membrane	36.87	28.19
KRH03745	Soybean	plasma membrane	38.05	25.83
KRH56647	Soybean	plasma membrane	38.55	25.64
KRH52490	Soybean	plasma membrane	36.7	24.8
KRH44060	Soybean	cytosol	34.68	24.7
KRH26375	Soybean	cytosol	34.34	24.55
KRH61812	Soybean	plasma membrane	36.03	24.37
KRH05105	Soybean	cytosol, plasma membrane, vacuole	35.19	24.13
KRH16013	Soybean	plasma membrane	34.85	23.66
KRH58233	Soybean	cytosol, extracellular, plasma membrane	8.75	23.42
KRH72964	Soybean	cytosol	27.61	19.32
KRH17312	Soybean	cytosol, plastid	27.61	19.29
KRH60563	Soybean	mitochondrion, plasma membrane	22.56	17.2
CDY61287	Canola	plasma membrane	14.98	16.79
Bra021279.1-P	Field mustard	nucleus	14.98	15.56
CDY10020	Canola	cytosol	5.89	10.26

Protein Annotations

Gene3D:1.10.287.70	Gene3D:2.60.120.10	MapMan:24.3.2.2	EMBL:ACUP02003423	EnsemblPlantsGene:GLYMA_06G074600	GO:GO:0003674
GO:GO:0005215	GO:GO:0005216	GO:GO:0005249	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0005887	GO:GO:0006810	GO:GO:0006811	GO:GO:0006813	GO:GO:0008150	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0034220	GO:GO:0042391	GO:GO:0055085	GO:GO:0071805
InterPro:IPR000595	InterPro:IPR014710	InterPro:IPR021789	InterPro:Ion_trans_dom	UniProt:K7KTM8	InterPro:KHA_dom
EnsemblPlants:KRH52547	ProteinID:KRH52547	ProteinID:KRH52547.1	InterPro:K_chnl_volt-dep_EAG/ELK/ERG	PFAM:PF00027	PFAM:PF00520
PFAM:PF11834	PRINTS:PR01463	PFscan:PS50042	PFscan:PS51490	PANTHER:PTHR10217	PANTHER:PTHR10217:SF537
InterPro:RmlC-like_jellyroll	SMART:SM00100	SUPFAM:SSF51206	SUPFAM:SSF81324	TMHMM:TMhelix	UniParc:UPI0002955E2E
InterPro:cNMP-bd-like	InterPro:cNMP-bd_dom	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:5751257..5757542

Molecular Weight (calculated)

68143.6 Da

IEP (calculated)

9.658

GRAVY (calculated)

-0.134

Length

594 amino acids

Sequence
(BLAST)

001: MSLSSLVRRR SSDEITNSAS VSSSLFPAFG TTIFDVEGYS KSNLRKYVIA PYDRRYQLWQ TFLAALVVYS AWASPFELAF RELLVGSLLP KIALRYVKKL
101: HFTMDIASTV PFEQIHQILT GKPTKSEVFG FLIMLRLWRL RRVSELFARY NTYLSVPPNF EKKDIRINYP ATRFCKLICV TLFAVHFAGC MYFWLAVQLK
201: TPKNTWIGNK TEDFNDLSVG LGYTYSMYWS VATLTTVGYG DFYAVNLTEK LFSTLYMLFN IGLTSYIIGN MTNLLVHSSV GTFAMRNAFN RILQYANKYR
301: LLEGLKEQMS AHMQLKFKTA ELQQEVLQYL PKTIRSNIAR HLFQNIVETA YLFKGVSETK AEYYPSKVDI ILQNEMSTYF YILVSGSLDV LMYKNGSEQF
401: LFKLESGGMA GEIGVMFNIP QPFTVRSRGL SQVKRINHRH FKHMVQPFSD DVKAINYNFI KYFKGLKGKV LEEISYITEL MGDLHDEHLM QNVGTDDEVS
501: RYQEASYKEG RKGNSKPLSS PVPIRVKIHG HHPNEHKVGN ETTPKIILLP NSVEDLFSVA EKKFGNRGSK ILMADGSEVE ELSAIRENDK LYIL

Best Arabidopsis Sequence Match ( AT4G32650.3 )
(BLAST)

001: MSTTTTEARS PLPLLLRRGR SSTALSASTA EARSPLSILQ FRRRSSKDVR NITSVSSSLL PAFGTFIEDD NPSSKPFIVL HFDRRYRLWE LFLVILVGYS
101: AWASLFELAF EKAAEGALLT IDLVVDFFFA VDIILTFFVS YLDNTTYLNV TDHKLIAKRY LKSVAFVMDV ASTLPIQFIY KTITGDVGRG QAFGFLNLLR
201: LWRLRRVAEL FKRLEKDAHF NYFVIRVIKL LCVTIFWIHL AGCILYWIAY HYPRPTDTWI GSQVEDFKER SVWLGYTYSM YWSIVTLTTV GYGDLHAVNS
301: REKTFNMFYM LFNIGLTSYI IGIMTNLVVH GALRTFAMRS AINDILRYTS KNRLPDTMRE QMLAHMQLKF KTAELRQEEV LQDLPKAIRS SINQHLFRSI
401: IEEAYLFKGF PEGLLVQLVS QIQAEYFPPK MEIILQNEIP TDFYVIVSGG VDIIASKGVS EQVLAKLGPG SMAGEIGVVF NIPQPFTVRT RRLSQVIRIG
501: HHKFKEMVQS DNDVDAKMII ANFMTYLKGL NDELKKEIPF LRDLLDDADA QVQETVQSEE TPQSNDEEIV TVSRHENGQK ERRREGVPKR VIIHGQAPPN
601: QDNKNNGDSN GRLIILPDSI QLLFDLAEKK LGKRGSTIAM ADGAHVEQID ALRENDHLYI F

Arabidopsis Description

KAT3KC1 [Source:UniProtKB/TrEMBL;Acc:A0A178UVX9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.