Factsheet for Solyc08g068000.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
mitochondrion 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, peroxisome, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc01g104030.2.1
Solyc02g062020.2.1
Solyc02g067790.2.1
Solyc02g083580.2.1
Solyc03g033420.2.1
Solyc05g017930.1.1
Solyc10g024360.1.1
Solyc12g006850.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G32650.1	Solyc05g017930.1.1	AT2G26650.1	12678562
AT4G32650.1	Solyc12g006850.1.1	AT2G26650.1	12678562
AT4G32650.1	Solyc05g017930.1.1	AT2G26650.1	15299147
AT4G32650.1	Solyc12g006850.1.1	AT2G26650.1	15299147
AT4G32650.1	Solyc02g062020.2.1	AT3G51300.1	15299147
AT4G32650.1	Solyc02g083580.2.1	AT3G51300.1	15299147
AT4G32650.1	Solyc03g033420.2.1	AT3G51300.1	15299147
AT4G32650.1	Solyc01g104030.2.1	AT4G22200.1	12678562
AT4G32650.1	Solyc10g024360.1.1	AT4G22200.1	12678562
AT4G32650.1	Solyc02g067790.2.1	AT5G14570.1	15299147

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400037608	Potato	plastid	91.14	94.06
Solyc01g010080.2.1	Tomato	plastid	71.38	73.09
VIT_04s0008g04510.t01	Wine grape	cytosol, mitochondrion, peroxisome, plasma membrane	66.25	67.51
KRH61886	Soybean	plasma membrane	58.16	59.84
GSMUA_Achr1P05260_001	Banana	plasma membrane	56.61	57.5
GSMUA_Achr5P09770_001	Banana	plasma membrane	57.39	56.51
KRH52547	Soybean	cytosol	51.79	56.06
Os01t0718700-00	Rice	endoplasmic reticulum, plasma membrane	32.5	56.03
HORVU3Hr1G068040.1	Barley	plasma membrane	37.01	55.61
AT4G32650.1	Thale cress	plastid	55.68	54.08
Os04t0117500-00	Rice	plasma membrane	23.17	52.1
TraesCS3D01G246300.1	Wheat	plastid	44.95	48.57
TraesCS3A01G245200.1	Wheat	mitochondrion	45.26	48.42
Os06t0254200-00	Rice	plasma membrane, plastid	45.1	47.54
OQU87429	Sorghum	mitochondrion	44.01	45.28
Solyc05g017930.1.1	Tomato	nucleus, plasma membrane	9.95	44.76
Zm00001d011723_P002	Maize	cytosol, plasma membrane, plastid	43.86	44.06
Zm00001d011729_P002	Maize	cytosol	42.15	42.81
Zm00001d016987_P001	Maize	plasma membrane	37.95	41.43
EES07044	Sorghum	cytosol, mitochondrion, peroxisome, plasma membrane	38.26	40.93
TraesCS3B01G274500.1	Wheat	plastid	40.28	40.03
Solyc09g005220.1.1	Tomato	cytosol	17.73	39.86
Solyc02g070530.2.1	Tomato	nucleus	42.15	39.39
Solyc08g016500.2.1	Tomato	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	41.06	38.65
Solyc03g058900.1.1	Tomato	cytosol	9.8	32.31
Solyc12g006850.1.1	Tomato	plasma membrane	44.32	32.28
Solyc01g104030.2.1	Tomato	cytosol	39.19	30.11
Solyc08g066990.2.1	Tomato	plasma membrane	39.81	29.7
Solyc10g024360.1.1	Tomato	cytosol	38.57	29.49
Solyc05g051220.2.1	Tomato	cytosol	31.73	24.76
Solyc11g011500.1.1	Tomato	cytosol	31.1	24.13
Solyc03g097940.2.1	Tomato	plasma membrane	26.44	21.88
CDY61287	Canola	plasma membrane	16.33	19.81
Bra021279.1-P	Field mustard	nucleus	15.86	17.83
CDY10020	Canola	cytosol	6.38	12.02

Protein Annotations

Gene3D:1.10.287.70	Gene3D:2.60.120.10	MapMan:24.3.2.2	GO:GO:0003674	GO:GO:0005215	GO:GO:0005216
GO:GO:0005249	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810
GO:GO:0006811	GO:GO:0006813	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0034220	GO:GO:0042391	GO:GO:0055085	GO:GO:0071805	InterPro:IPR000595	InterPro:IPR014710
InterPro:IPR021789	InterPro:Ion_trans_dom	UniProt:K4CM24	InterPro:KHA_dom	InterPro:K_chnl_volt-dep_EAG/ELK/ERG	PFAM:PF00027
PFAM:PF00520	PFAM:PF11834	PRINTS:PR01463	PFscan:PS50042	PFscan:PS51490	PANTHER:PTHR10217
PANTHER:PTHR10217:SF537	InterPro:RmlC-like_jellyroll	SMART:SM00100	SUPFAM:SSF51206	SUPFAM:SSF81324	EnsemblPlantsGene:Solyc08g068000.1
EnsemblPlants:Solyc08g068000.1.1	TMHMM:TMhelix	UniParc:UPI000276C684	InterPro:cNMP-bd-like	InterPro:cNMP-bd_dom	SEG:seg

Description

No Description!

Coordinates

chr8:-:57066091..57070998

Molecular Weight (calculated)

73675.2 Da

IEP (calculated)

8.967

GRAVY (calculated)

0.004

Length

643 amino acids

Sequence
(BLAST)

001: MSSTRSPQGQ SSGEIRNIAS VSSSLLPAFG TVMGEGTLKL KRFVIAPYDR RYRIWQTFLV ILVVYSAWSS PFELAFKKAA SGGLLPVDLL VDAFFAIDIL
101: LTFFVAYLDK TTYLLIHHHN KIAFRYSHII CVILNMRYGE SRVYANLIFI SQRYVTHLGF PMDVASTIPF QPIYQFFNGK KQEGDIFGFL NLLRLWRLRR
201: VSKFFSRLEK DSRFSYFWTR FCKLVCVTLF AVHSAGCFYY WLATHYHTAE NTWIGSNVTS FQERSISLGY TYSMYWSVVT LTTVGYGDLY AHNTGEKVFA
301: IFYMLFNIGL TAYLIGNMTN LVVHSAARTF AMRDAINEIL RYARKNRLPE GIKEQMLAHS TLRFKTAELQ QEEVVEDLPK AIRSSIAQHL FHTTIQNTYL
401: FKGVSEDFLV QLVSEIKAEY FPPKVDIVIQ NEILTDFYII VSGAVEVVTY KNGTEQFLSK LESPELFGEI GVIFNMPQPF TVRSKRLSQA VRISHHHFKQ
501: LLQLFTTDGK IILSNFLQHL KGIEKEELQE IPLISELLSD LNSEEFSVST ERNHEGPNQE GTRIRRVSGT FPTRIIIHGY HPHDKPNEGG IEGKLIHLPE
601: SVEVLLTIAE KKFGKRRSII LLADGSLQKD LGALQENDHL YIV

Best Arabidopsis Sequence Match ( AT4G32650.3 )
(BLAST)

001: MSTTTTEARS PLPLLLRRGR SSTALSASTA EARSPLSILQ FRRRSSKDVR NITSVSSSLL PAFGTFIEDD NPSSKPFIVL HFDRRYRLWE LFLVILVGYS
101: AWASLFELAF EKAAEGALLT IDLVVDFFFA VDIILTFFVS YLDNTTYLNV TDHKLIAKRY LKSVAFVMDV ASTLPIQFIY KTITGDVGRG QAFGFLNLLR
201: LWRLRRVAEL FKRLEKDAHF NYFVIRVIKL LCVTIFWIHL AGCILYWIAY HYPRPTDTWI GSQVEDFKER SVWLGYTYSM YWSIVTLTTV GYGDLHAVNS
301: REKTFNMFYM LFNIGLTSYI IGIMTNLVVH GALRTFAMRS AINDILRYTS KNRLPDTMRE QMLAHMQLKF KTAELRQEEV LQDLPKAIRS SINQHLFRSI
401: IEEAYLFKGF PEGLLVQLVS QIQAEYFPPK MEIILQNEIP TDFYVIVSGG VDIIASKGVS EQVLAKLGPG SMAGEIGVVF NIPQPFTVRT RRLSQVIRIG
501: HHKFKEMVQS DNDVDAKMII ANFMTYLKGL NDELKKEIPF LRDLLDDADA QVQETVQSEE TPQSNDEEIV TVSRHENGQK ERRREGVPKR VIIHGQAPPN
601: QDNKNNGDSN GRLIILPDSI QLLFDLAEKK LGKRGSTIAM ADGAHVEQID ALRENDHLYI F

Arabidopsis Description

KAT3KC1 [Source:UniProtKB/TrEMBL;Acc:A0A178UVX9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.