Factsheet for Solyc11g011500.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc05g051220.2.1
Solyc11g011500.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G02850.1	Solyc05g051220.2.1	AT3G02850.1	15298894
AT3G02850.1	Solyc11g011500.1.1	AT3G02850.1	15298894

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400034446	Potato	cytosol	97.47	97.58
Solyc05g051220.2.1	Tomato	cytosol	80.22	80.7
KRH72964	Soybean	cytosol	75.15	73.38
KRH17312	Soybean	cytosol, plastid	74.79	72.94
VIT_14s0006g00230.t01	Wine grape	extracellular	12.3	72.86
VIT_14s0006g00100.t01	Wine grape	cytosol, plasma membrane, plastid	70.93	71.62
Bra001068.1-P	Field mustard	plasma membrane	65.14	70.87
Bra040606.1-P	Field mustard	cytosol, plasma membrane, vacuole	70.69	70.69
CDY51528	Canola	cytosol	70.69	70.69
CDY28715	Canola	cytosol	70.69	70.6
CDX74231	Canola	plasma membrane	70.57	70.57
CDX92017	Canola	plasma membrane	70.57	70.57
AT3G02850.1	Thale cress	cytosol, plasma membrane, vacuole	70.45	70.53
Solyc03g097940.2.1	Tomato	plasma membrane	59.47	63.45
Solyc01g010080.2.1	Tomato	plastid	24.25	32.01
Solyc08g068000.1.1	Tomato	plasma membrane	24.13	31.1
Solyc08g066990.2.1	Tomato	plasma membrane	30.28	29.12
Solyc12g006850.1.1	Tomato	plasma membrane	30.04	28.2
Solyc08g016500.2.1	Tomato	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	22.92	27.82
Solyc02g070530.2.1	Tomato	nucleus	22.68	27.33
Solyc01g104030.2.1	Tomato	cytosol	27.14	26.88
Solyc10g024360.1.1	Tomato	cytosol	27.26	26.87
Solyc05g017930.1.1	Tomato	nucleus, plasma membrane	4.46	25.87
Solyc09g005220.1.1	Tomato	cytosol	8.56	24.83
Solyc03g058900.1.1	Tomato	cytosol	5.55	23.59

Protein Annotations

Gene3D:1.10.287.70	Gene3D:1.25.40.20	Gene3D:2.60.120.10	MapMan:24.3.2.2	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	GO:GO:0003674	GO:GO:0005215	GO:GO:0005216	GO:GO:0005244	GO:GO:0005249
GO:GO:0005267	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0005887	GO:GO:0006810	GO:GO:0006811	GO:GO:0006813	GO:GO:0008150	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0034765	GO:GO:0042391	GO:GO:0055085	GO:GO:0071805
InterPro:IPR000595	InterPro:IPR002110	InterPro:IPR014710	InterPro:IPR020683	InterPro:IPR021789	InterPro:IPR036770
InterPro:Ion_trans_dom	UniProt:K4D5V5	InterPro:KHA_dom	InterPro:K_chnl_volt-dep_EAG/ELK/ERG	PFAM:PF00027	PFAM:PF00520
PFAM:PF11834	PFAM:PF12796	PFAM:PF13857	PRINTS:PR01415	PRINTS:PR01463	PFscan:PS50042
PFscan:PS50088	PFscan:PS50297	PFscan:PS51490	PANTHER:PTHR10217	PANTHER:PTHR10217:SF478	InterPro:RmlC-like_jellyroll
SMART:SM00100	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF51206	SUPFAM:SSF81324	EnsemblPlantsGene:Solyc11g011500.1
EnsemblPlants:Solyc11g011500.1.1	TMHMM:TMhelix	UniParc:UPI0002769C3C	InterPro:cNMP-bd-like	InterPro:cNMP-bd_dom	SEG:seg

Description

No Description!

Coordinates

chr11:+:4549309..4556010

Molecular Weight (calculated)

94998.0 Da

IEP (calculated)

6.789

GRAVY (calculated)

-0.122

Length

829 amino acids

Sequence
(BLAST)

001: MTRGEEVLEI DINGGRAEYE IEDMRDKMES SRGSRFKLIE NDLVGADMFS RRRRKFSRES LLNGLKDLSQ GFVIHPENRW YRMWENFILI WSIYSSFFTP
101: MEFAFFNGLP RKLFLLDICG QIVFLVDIVI QFSVAYRDSQ TYKMVYKRTP IALRYLKSHF IMDFLGCMPW DIIYKAVGSK EEVRYLLWIR LSRARRITYF
201: FQKMEKDIRI NYLFTRIVKL ITVELYCTHT AACIFYFLAT TLSEQQEGYT WIGSLKLGDY SYSNFRDIDL WTRYTTSMYF AIVTMATVGY GDIHAVNLRE
301: MIFVMIYVSF DMILSAYLIG NMTALIVKGS KTERYRDKMT DLLKYMNRNR LGRDIRSQIK GHLRLQYESA YTDAAVLQDI PISIRAKISQ NLYQSYIENV
401: PLFKGCSLEF ISQVVTRVHE EFFLPGEVIM EQGNVVDQLY FVCHGVLEEV GIAKDGLEET VSLLEPNSSF GDISIVCNIP QPYTVRVCEL CRLLRIDKQS
501: FANILEIYFH DGRRILSNLL QGKESNLRVK QLESDIALHI GKHEAELALK VNSAAYHGDL HQLKSLIRAG ADPKKKDYDG RSPLHLAASR GYEDITLFLI
601: QEGIDINAPD KFGNTPLLEA IKIGHDRVAS LLVKEGALLN IENAGSFLCM VIARGDSDLL RRLLSNGVDP NTKDYDQRTP LHVAASQGQY SMAKLLLGAG
701: ASVFSKDRWG NTPVDEARVS GNKQMISLLE EAKSAQLCEF PDVPHEISDK LRPRKCTVLP FHPWESKDLR KHGVVLWIPQ TIEELVTTAS EQLDFPSGTS
801: CILSEDAGKI LDVDMIVDGQ KLYLINEST

Best Arabidopsis Sequence Match ( AT3G02850.1 )
(BLAST)

001: MGGSSGGGVS YRSGGESDVE LEDYEVDDFR DGIVESRGNR FNPLTNFLGL DFAGGSGGKF TVINGIRDIS RGSIVHPDNR WYKAWTMFIL IWALYSSFFT
101: PLEFGFFRGL PENLFILDIA GQIAFLVDIV LTFFVAYRDS RTYRMIYKRS SIALRYLKST FIIDLLACMP WDIIYKAAGE KEEVRYLLLI RLYRVHRVIL
201: FFHKMEKDIR INYLFTRIVK LIFVELYCTH TAACIFYYLA TTLPASQEGY TWIGSLKLGD YSYSKFREID LWTRYTTSMY FAVVTMATVG YGDIHAVNMR
301: EMIFAMVYIS FDMILGAYLI GNMTALIVKG SKTERFRDKM ADIMRYMNRN KLGRNIRGQI TGHLRLQYES SYTEAAVLQD IPVSIRAKIA QTLYLPYIEK
401: VPLFRGCSSE FINQIVIRLH EEFFLPGEVI MEQGSVVDQL YFVCHGVLEE IGITKDGSEE IVAVLQPDHS FGEISILCNI PQPYTVRVAE LCRILRLDKQ
501: SFMNILEIFF HDGRRILNNL LEGKESNVRI KQLESDITFH ISKQEAELAL KLNSAAFYGD LYQLKSLIRA GGDPNKTDYD GRSPLHLAAS RGYEDITLYL
601: IQESVDVNIK DKLGSTPLLE AIKNGNDRVA ALLVKEGATL NIENAGTFLC TVVAKGDSDF LKRLLSNGID PNSKDYDHRT PLHVAASEGF YVLAIQLVEA
701: SANVLAKDRW GNTPLDEALG CGNKMLIKLL EDAKNSQISS FPSGSKEPKD KVYKKKCTVY FSHPGDSKEK RRRGIVLWVP RSIEELIRTA KEQLNVPEAS
801: CVLSEDEAKI IDVDLISDGQ KLYLAVET

Arabidopsis Description

SKORSKOR [Source:UniProtKB/TrEMBL;Acc:A0A178VHK5]
SUBAcon: [plasma membrane,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.