Factsheet for VIT_14s0006g00230.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 2
extracellular 6
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0006g00100.t01	Wine grape	cytosol, plasma membrane, plastid	90.0	15.35
CDX71184	Canola	plasma membrane	72.86	13.9
VIT_17s0000g01980.t01	Wine grape	golgi, plasma membrane	70.71	13.54
KRH72964	Soybean	cytosol	80.0	13.19
KRH17312	Soybean	cytosol, plastid	80.0	13.18
Solyc05g051220.2.1	Tomato	cytosol	77.14	13.11
VIT_18s0089g01300.t01	Wine grape	plasma membrane	67.86	13.01
Bra036395.1-P	Field mustard	cytosol	73.57	12.61
AT5G37500.2	Thale cress	plasma membrane	75.0	12.47
CDY32059	Canola	plasma membrane	72.86	12.47
PGSC0003DMT400034446	Potato	cytosol	72.86	12.32
Solyc11g011500.1.1	Tomato	cytosol	72.86	12.3
VIT_11s0016g05810.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	70.71	11.84
VIT_04s0008g04510.t01	Wine grape	cytosol, mitochondrion, peroxisome, plasma membrane	33.57	7.45
VIT_10s0003g03270.t01	Wine grape	plasma membrane	38.57	6.83
VIT_12s0034g02240.t01	Wine grape	cytosol, mitochondrion, plasma membrane	35.0	5.84
VIT_11s0016g04750.t01	Wine grape	plasma membrane	35.0	5.62
VIT_04s0008g04990.t01	Wine grape	mitochondrion	34.29	5.35

Protein Annotations

MapMan:35.1	ProteinID:CCB57606	ProteinID:CCB57606.1	UniProt:F6HSG6	EMBL:FN596245	GO:GO:0000166
GO:GO:0003674	GO:GO:0005215	GO:GO:0005249	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0008150	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0042391	GO:GO:0071805	PANTHER:PTHR10217	PANTHER:PTHR10217:SF478
TMHMM:TMhelix	UniParc:UPI00021096B1	ArrayExpress:VIT_14s0006g00230	EnsemblPlantsGene:VIT_14s0006g00230	EnsemblPlants:VIT_14s0006g00230.t01	:

Description

No Description!

Coordinates

chr14:+:13445734..13447648

Molecular Weight (calculated)

16692.1 Da

IEP (calculated)

8.956

GRAVY (calculated)

-0.054

Length

140 amino acids

Sequence
(BLAST)

001: MEFGFFRGLP KDLVFLDIAG QIAFLIDIML QFFLAYRDTH TYRMVYKRTS IALRIRKVTD FFQKMEKDIR INYMFTYCAH TAACIFYYLA TTLPQSEEGY
101: TWIGSLKLGD YTYSHFREID IWKRYTTSLS FSSVNNGHSW

Best Arabidopsis Sequence Match ( AT3G02850.1 )
(BLAST)

001: MGGSSGGGVS YRSGGESDVE LEDYEVDDFR DGIVESRGNR FNPLTNFLGL DFAGGSGGKF TVINGIRDIS RGSIVHPDNR WYKAWTMFIL IWALYSSFFT
101: PLEFGFFRGL PENLFILDIA GQIAFLVDIV LTFFVAYRDS RTYRMIYKRS SIALRYLKST FIIDLLACMP WDIIYKAAGE KEEVRYLLLI RLYRVHRVIL
201: FFHKMEKDIR INYLFTRIVK LIFVELYCTH TAACIFYYLA TTLPASQEGY TWIGSLKLGD YSYSKFREID LWTRYTTSMY FAVVTMATVG YGDIHAVNMR
301: EMIFAMVYIS FDMILGAYLI GNMTALIVKG SKTERFRDKM ADIMRYMNRN KLGRNIRGQI TGHLRLQYES SYTEAAVLQD IPVSIRAKIA QTLYLPYIEK
401: VPLFRGCSSE FINQIVIRLH EEFFLPGEVI MEQGSVVDQL YFVCHGVLEE IGITKDGSEE IVAVLQPDHS FGEISILCNI PQPYTVRVAE LCRILRLDKQ
501: SFMNILEIFF HDGRRILNNL LEGKESNVRI KQLESDITFH ISKQEAELAL KLNSAAFYGD LYQLKSLIRA GGDPNKTDYD GRSPLHLAAS RGYEDITLYL
601: IQESVDVNIK DKLGSTPLLE AIKNGNDRVA ALLVKEGATL NIENAGTFLC TVVAKGDSDF LKRLLSNGID PNSKDYDHRT PLHVAASEGF YVLAIQLVEA
701: SANVLAKDRW GNTPLDEALG CGNKMLIKLL EDAKNSQISS FPSGSKEPKD KVYKKKCTVY FSHPGDSKEK RRRGIVLWVP RSIEELIRTA KEQLNVPEAS
801: CVLSEDEAKI IDVDLISDGQ KLYLAVET

Arabidopsis Description

SKORSKOR [Source:UniProtKB/TrEMBL;Acc:A0A178VHK5]
SUBAcon: [plasma membrane,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.