CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
extracellular 3
golgi 3
plasma membrane 5
endoplasmic reticulum 4
vacuole 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	plasma membrane
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra036395.1-P	Field mustard	cytosol	98.37	88.37
CDY32059	Canola	plasma membrane	98.09	88.02
AT5G37500.2	Thale cress	plasma membrane	84.88	73.99
VIT_14s0006g00230.t01	Wine grape	extracellular	13.9	72.86
CDX74231	Canola	plasma membrane	70.03	62.0
CDX92017	Canola	plasma membrane	70.03	62.0
CDY28715	Canola	cytosol	69.21	61.2
CDY51528	Canola	cytosol	68.94	61.04
VIT_14s0006g00100.t01	Wine grape	cytosol, plasma membrane, plastid	67.85	60.66
CDY10020	Canola	cytosol	15.26	32.84
CDY35373	Canola	cytosol, plasma membrane, vacuole	32.29	27.56
CDY55714	Canola	cytosol, plasma membrane, vacuole	32.29	27.53
CDY13496	Canola	plastid	24.25	27.13
CDX75267	Canola	plastid	23.98	27.04
CDX79135	Canola	plasma membrane	29.02	27.03
CDX68872	Canola	plastid	23.71	26.73
CDY35154	Canola	plasma membrane	23.84	26.64
CDY03233	Canola	plasma membrane	23.71	26.52
CDX68851	Canola	plasma membrane	30.93	26.49
CDX72366	Canola	plastid	23.02	26.2
CDX75249	Canola	plasma membrane	31.06	26.03
CDX78839	Canola	plasma membrane	24.11	25.88
CDX99479	Canola	plasma membrane	24.11	25.84
CDY33464	Canola	cytosol, plasma membrane, plastid	23.43	25.83
CDY62359	Canola	cytosol, plasma membrane, plastid	23.16	25.53
CDY11516	Canola	cytosol	30.38	25.43
CDX76746	Canola	cytosol	30.11	25.14
CDY61287	Canola	plasma membrane	17.98	24.91
CDX82921	Canola	cytosol	28.88	24.59
CDX76529	Canola	plasma membrane	23.71	24.44
CDY34066	Canola	endoplasmic reticulum, plasma membrane	15.94	19.34

Protein Annotations

Gene3D:1.10.287.630	Gene3D:1.10.287.70	Gene3D:1.25.40.20	Gene3D:2.60.120.10	MapMan:24.3.2.2	GO:A0A078C4W1
InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	EnsemblPlants:CDX71184	ProteinID:CDX71184	ProteinID:CDX71184.1
GO:GO:0003674	GO:GO:0005215	GO:GO:0005216	GO:GO:0005249	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0006810	GO:GO:0006811	GO:GO:0006813	GO:GO:0008150	GO:GO:0016020
GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00144709001	InterPro:IPR000595	InterPro:IPR002110	InterPro:IPR014710	InterPro:IPR020683
InterPro:IPR021789	InterPro:IPR036770	InterPro:Ion_trans_dom	InterPro:KHA_dom	InterPro:K_chnl_volt-dep_EAG/ELK/ERG	PFAM:PF00027
PFAM:PF00520	PFAM:PF11834	PFAM:PF12796	PRINTS:PR01415	PRINTS:PR01463	PFscan:PS50042
PFscan:PS50088	PFscan:PS50297	PFscan:PS51490	PANTHER:PTHR10217	PANTHER:PTHR10217:SF478	InterPro:RmlC-like_jellyroll
SMART:SM00100	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF51206	SUPFAM:SSF81324	TMHMM:TMhelix
UniParc:UPI0004EECCDF	InterPro:cNMP-bd-like	InterPro:cNMP-bd_dom	:	:	:

Description

BnaC07g04630D

Coordinates

chrLK031792:+:586020..589598

Molecular Weight (calculated)

84007.3 Da

IEP (calculated)

6.294

GRAVY (calculated)

-0.138

Length

734 amino acids

Sequence
(BLAST)

001: MEFGFFRGLP ENLFVLDIVG QIAFLVDIVL QFFVAFQDKH TYRTDDKPTH IAHRYLKSHF FLDLVSCFPW DLIYKASGKH EVVRYILWIR LFRVRKVIEF
101: FQRLEKDTRI NYLFTRILKL IFVEVYCTHT AACIFYYLAT TLPAENEGYT WIGSLKLGDY SYENFRKIDI WKRYTTSLYF AIVTMATVGY GDIHAVNLRE
201: MIFVMIYVSF DMVLGAYLIG NITALIVKGS NTERFRDKMN DLASFMNRKK LRGDIRSQIT HHVRSQYDSK FTNTVMLQDI PASIRAKIAQ LLCTPYIEKI
301: PLFKGCSSEF INQIVVRLHE EYFFPGEIIT EQGNVVDHLY FVCEGSLEAL ETKTDGTEDL VELLEPHTSF GDISIICNIS QPFTIRVRSL CHLLRLDKQS
401: FSNILEIYFH DGRKILNNLM EGKESNERIK KLESDVMIHI GKQEAELALK VNSAAFKGDI YQLKSLVRSG ADPNKTDYDG RAPLHLAASR GYEDITLFLI
501: QEGVDINQKD KFGNTPLLEA VKAGQDRVID LLVKEGASFD LEDAGNFLCT VVVKGDSDFL KRLLSSGMDP NTEDYDHRTP LHVAASEGLF LMAKMLVEAG
601: ASVVAKDRWG NSPLDEARMC GNKKLIKLLE DANTAQPYIR PSSFHEPQDE KFERRKCTVF PFHPHEEPSR KHGVMVWLPR DLQKLVETAA QELGISNEVP
701: FVILSEEGGR ITDIDMISDG QKLYLISDST DQSA

Best Arabidopsis Sequence Match ( AT5G37500.1 )
(BLAST)

001: MGRLRRRQEI IDHEEEESND DVSSRRGKLS LAETFRWLDS SEHRRIETDG HNDYKYIIHP KNRWYKAWEM FILVWAIYSS LFTPMEFGFF RGLPERLFVL
101: DIVGQIAFLV DIVLQFFVAY RDTQTYRTVY KPTRIAFRYL KSHFLMDFIG CFPWDLIYKA SGKHELVRYL LWIRLFRVRK VVEFFQRLEK DTRINYLFTR
201: ILKLLFVEVY CTHTAACIFY YLATTLPPEN EGYTWIGSLK LGDYSYENFR EIDLWKRYTT ALYFAIVTMA TVGYGDIHAV NLREMIFVMI YVSFDMVLGA
301: YLIGNITALI VKGSNTERFR DKMNDLISFM NRKKLGRDLR SQITGHVRLQ YDSHYTDTVM LQDIPASIRA KIAQLLYLPY IKKVPLFKGC STEFINQIVI
401: RLHEEYFLPG EVITEQGNVV DHLYFVCEGL LEALVTKTDG SEESVTLLGP HTSFGDISII CNISQPFTVR VCELCHLLRL DKQSFSNILE IYFHDGRTIL
501: NNIMEEKESN DRIKKLESDI VIHIGKQEAE LALKVNSAAF QGDFYQLKSL IRSGADPNKT DYDGRSPLHL AACRGYEDIT LFLIQEGVDV NLKDKFGHTP
601: LFEAVKAGQE GVIGLLVKEG ASFNLEDSGN FLCTTVAKGD SDFLKRLLSS GMNPNSEDYD HRTPLHVAAS EGLFLMAKML VEAGASVISK DRWGNSPLDE
701: ARLCGNKKLI KLLEDVKNAQ SSIYPSSLRE LQEERIERRK CTVFPFHPQE AKEERSRKHG VVVWIPSNLE KLIVTAAKEL GLSDGASFVL LSEDQGRITD
801: IDMISDGHKL YMISDTTDQT

Arabidopsis Description

GORKgated outwardly-rectifying K+ channel [Source:TAIR;Acc:AT5G37500]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.