Factsheet for Bra036395.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plasma membrane 2
extracellular 1
golgi 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY32059	Canola	plasma membrane	99.27	99.14
CDX71184	Canola	plasma membrane	88.37	98.37
AT5G37500.2	Thale cress	plasma membrane	83.84	81.35
VIT_14s0006g00230.t01	Wine grape	extracellular	12.61	73.57
Bra001068.1-P	Field mustard	plasma membrane	63.53	68.11
Bra040606.1-P	Field mustard	cytosol, plasma membrane, vacuole	66.22	65.26
VIT_14s0006g00100.t01	Wine grape	cytosol, plasma membrane, plastid	64.01	63.7
Bra037049.1-P	Field mustard	plastid	23.5	29.77
Bra011367.1-P	Field mustard	plastid	23.38	29.34
Bra017567.1-P	Field mustard	plasma membrane	23.5	29.22
Bra032037.1-P	Field mustard	cytosol	30.72	29.19
Bra013296.1-P	Field mustard	plasma membrane	23.75	28.24
Bra011351.1-P	Field mustard	cytosol	29.62	27.63
Bra007785.1-P	Field mustard	cytosol	29.01	27.37
Bra025028.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	22.15	27.18
Bra013599.1-P	Field mustard	cytosol	27.91	26.45
Bra021012.1-P	Field mustard	plasma membrane	23.01	26.4
Bra021279.1-P	Field mustard	nucleus	15.79	22.55

Protein Annotations

Gene3D:1.10.287.70	Gene3D:1.25.40.20	Gene3D:2.60.120.10	MapMan:24.3.2.2	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	EnsemblPlantsGene:Bra036395	EnsemblPlants:Bra036395.1	EnsemblPlants:Bra036395.1-P	GO:GO:0003674	GO:GO:0005215
GO:GO:0005216	GO:GO:0005244	GO:GO:0005249	GO:GO:0005267	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0006810	GO:GO:0006811	GO:GO:0006813	GO:GO:0008150	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0034765	GO:GO:0055085	GO:GO:0071805	InterPro:IPR000595
InterPro:IPR002110	InterPro:IPR014710	InterPro:IPR020683	InterPro:IPR021789	InterPro:IPR036770	InterPro:Ion_trans_dom
InterPro:KHA_dom	InterPro:K_chnl_volt-dep_EAG/ELK/ERG	UniProt:M4F5N9	PFAM:PF00027	PFAM:PF00520	PFAM:PF11834
PFAM:PF12796	PRINTS:PR01415	PRINTS:PR01463	PFscan:PS50042	PFscan:PS50088	PFscan:PS50297
PFscan:PS51490	PANTHER:PTHR10217	PANTHER:PTHR10217:SF478	InterPro:RmlC-like_jellyroll	SMART:SM00100	SMART:SM00248
SUPFAM:SSF48403	SUPFAM:SSF51206	SUPFAM:SSF81324	TMHMM:TMhelix	UniParc:UPI000254120F	InterPro:cNMP-bd-like
InterPro:cNMP-bd_dom	:	:	:	:	:

Description

AT5G37500 (E=0.0) GORK | GORK (GATED OUTWARDLY-RECTIFYING K+ CHANNEL); cyclic nucleotide binding / inward rectifier potassium channel/ outward rectifier potassium channel

Coordinates

chrA07:+:2226668..2231920

Molecular Weight (calculated)

94115.1 Da

IEP (calculated)

6.048

GRAVY (calculated)

-0.179

Length

817 amino acids

Sequence
(BLAST)

001: MGCLRRRQES IAEEDDINDD VSRRRGRFSL AESFRWLDSP EHLKDDSDGH NEYPWIIKPS IRWYKAWELF ILVWAIYSSL FTPMEFGFFR GLPENLFILD
101: IVGQIAFLVD IVLQFFVAFQ DKHTYRIDSK PTHIALRYLK SHFFLDLVSC FPWDLIYKAS GKHEVVRYIL WIRLFRVRKV IEFFQRLEKD TRINYLFTRI
201: LKLIFVEVYC THTAACIFYY LATTLPAENE GYTWIGSLKL GDYSYENFRK IDIWKRYTTS LYFAIVTMAT VGYGDIHAVN LREMIFVMIY VSFDMVLGAY
301: LIGNITALIV KGSNTERFRD KMNDLASFMN RKKLRGDIRS QITHHVRLQY DSKFTNTVML QDIPASIRAK IAQLLYTPYI EKIPLFKGCS SEFINQIVVR
401: LHEEYFFPGE VITEQGNVVD HLYFVCEGSL EALETKTDGT EDLVELLEPH TSFGDISIIC NISQPFTIRV RSLCHLLRLD KQSFSNILEI YFHDGRKILN
501: NLMEGKESNE RIKKLESDIM IHIGKQEAEL ALKVNSAAFQ GDIYQLKSLV RSGADPNKTD YDGRAPLHLA ASRGYEDITL FLIQEGVDIN QKDKFGNTPL
601: LEAVKAGQDR VIDLLVKEGA SFDLEDAGNF LCTVVVKGDS DFLKRLLSSG MDPNTEDYDH RTPLHVAASE GLFLMAKMLV EAGASVVAKD RWGNSPLDEA
701: RMCGNKKLIK LLEDADTSQP YIRPSSFHEP QDEKFERRKC TVFPFHPHEE PSRKHGVMVW LPRDLQKLVE TAAQELGISN EVPFVILSEE GGRITDIDMI
801: SDGQKLYLIS DSTDQST

Best Arabidopsis Sequence Match ( AT5G37500.1 )
(BLAST)

001: MGRLRRRQEI IDHEEEESND DVSSRRGKLS LAETFRWLDS SEHRRIETDG HNDYKYIIHP KNRWYKAWEM FILVWAIYSS LFTPMEFGFF RGLPERLFVL
101: DIVGQIAFLV DIVLQFFVAY RDTQTYRTVY KPTRIAFRYL KSHFLMDFIG CFPWDLIYKA SGKHELVRYL LWIRLFRVRK VVEFFQRLEK DTRINYLFTR
201: ILKLLFVEVY CTHTAACIFY YLATTLPPEN EGYTWIGSLK LGDYSYENFR EIDLWKRYTT ALYFAIVTMA TVGYGDIHAV NLREMIFVMI YVSFDMVLGA
301: YLIGNITALI VKGSNTERFR DKMNDLISFM NRKKLGRDLR SQITGHVRLQ YDSHYTDTVM LQDIPASIRA KIAQLLYLPY IKKVPLFKGC STEFINQIVI
401: RLHEEYFLPG EVITEQGNVV DHLYFVCEGL LEALVTKTDG SEESVTLLGP HTSFGDISII CNISQPFTVR VCELCHLLRL DKQSFSNILE IYFHDGRTIL
501: NNIMEEKESN DRIKKLESDI VIHIGKQEAE LALKVNSAAF QGDFYQLKSL IRSGADPNKT DYDGRSPLHL AACRGYEDIT LFLIQEGVDV NLKDKFGHTP
601: LFEAVKAGQE GVIGLLVKEG ASFNLEDSGN FLCTTVAKGD SDFLKRLLSS GMNPNSEDYD HRTPLHVAAS EGLFLMAKML VEAGASVISK DRWGNSPLDE
701: ARLCGNKKLI KLLEDVKNAQ SSIYPSSLRE LQEERIERRK CTVFPFHPQE AKEERSRKHG VVVWIPSNLE KLIVTAAKEL GLSDGASFVL LSEDQGRITD
801: IDMISDGHKL YMISDTTDQT

Arabidopsis Description

GORKgated outwardly-rectifying K+ channel [Source:TAIR;Acc:AT5G37500]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.