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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 4
  • vacuole 2
  • extracellular 1
  • endoplasmic reticulum 1
  • golgi 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane, vacuole
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra013599.1-P
Bra017567.1-P
Bra025028.1-P
Bra032037.1-P
Bra037874.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G46240.1 Bra032037.1-P AT2G26650.1 15299147
AT5G46240.1 Bra013599.1-P AT4G22200.1 12034902
AT5G46240.1 Bra013599.1-P AT4G22200.1 15299147
AT5G46240.1 Bra013599.1-P AT4G22200.1 17085433
AT5G46240.1 Bra037874.1-P AT5G41160.1 15299147
AT5G46240.1 Bra017567.1-P AT5G46240.1 11042178
AT5G46240.1 Bra025028.1-P AT5G46240.1 11042178
AT5G46240.1 Bra017567.1-P AT5G46240.1 15299147
AT5G46240.1 Bra025028.1-P AT5G46240.1 15299147
AT5G46240.1 Bra017567.1-P AT5G46240.1 17085433
AT5G46240.1 Bra025028.1-P AT5G46240.1 17085433
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY35154 Canola plasma membrane 99.85 99.85
Bra025028.1-P Field mustard cytosol, endoplasmic reticulum, plasma membrane 85.84 84.68
AT5G46240.1 Thale cress plasma membrane 86.0 83.46
Bra013296.1-P Field mustard plasma membrane 75.19 71.91
Os01t0756700-01 Rice plasma membrane 47.95 62.75
TraesCS3A01G294200.1 Wheat mitochondrion, plasma membrane 47.03 61.8
TraesCS3B01G328800.1 Wheat plasma membrane 47.49 61.78
TraesCS3D01G294000.1 Wheat mitochondrion, plasma membrane 47.18 61.75
EES01496 Sorghum mitochondrion, plasma membrane 49.77 61.7
Bra021012.1-P Field mustard plasma membrane 66.06 60.96
KRH44805 Soybean plasma membrane 65.91 59.48
Solyc02g070530.2.1 Tomato nucleus 62.1 59.3
HORVU3Hr1G072850.15 Barley plastid 45.81 58.79
GSMUA_Achr10P... Banana plasma membrane 58.75 58.75
PGSC0003DMT400054339 Potato plasma membrane 61.19 58.43
GSMUA_Achr7P09360_001 Banana plasma membrane 57.08 57.69
Os01t0210700-02 Rice extracellular 51.29 56.07
VIT_10s0003g03270.t01 Wine grape plasma membrane 67.12 55.75
KRH21063 Soybean plasma membrane 65.91 55.73
Solyc08g016500.2.1 Tomato cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 57.84 55.64
PGSC0003DMT400024968 Potato cytosol, plasma membrane, vacuole 57.99 55.3
KRH11194 Soybean plasma membrane 64.84 54.83
GSMUA_Achr6P05630_001 Banana cytosol, nucleus, plasma membrane 56.16 54.19
GSMUA_Achr6P26910_001 Banana endoplasmic reticulum, peroxisome, plasma membrane 57.84 52.13
EES06576 Sorghum plasma membrane 56.62 51.03
Os02t0245800-01 Rice plasma membrane 55.4 50.7
GSMUA_Achr8P27260_001 Banana plasma membrane 55.71 50.48
GSMUA_Achr9P06470_001 Banana plasma membrane 55.4 50.42
TraesCS6A01G160500.1 Wheat plasma membrane 55.25 50.0
GSMUA_Achr2P09100_001 Banana plasma membrane, vacuole 56.47 49.87
TraesCS6D01G152200.1 Wheat plasma membrane 54.95 49.72
TraesCS6B01G190900.1 Wheat plasma membrane 54.64 49.52
Zm00001d053446_P001 Maize plastid 56.47 48.94
HORVU3Hr1G028670.16 Barley plasma membrane 52.36 48.52
Zm00001d016160_P001 Maize plasma membrane 51.29 48.42
TraesCS3A01G132400.1 Wheat plasma membrane 52.51 47.98
TraesCS3D01G148600.1 Wheat plasma membrane 52.51 47.98
TraesCS3B01G167100.1 Wheat plasma membrane 52.36 47.84
Solyc03g058900.1.1 Tomato cytosol 13.55 45.64
Zm00001d039386_P001 Maize plasma membrane 44.6 45.22
KRH58233 Soybean cytosol, extracellular, plasma membrane 14.76 43.69
PGSC0003DMT400054318 Potato nucleus 19.94 41.59
Bra037049.1-P Field mustard plastid 39.42 40.16
Bra011367.1-P Field mustard plastid 39.73 40.09
PGSC0003DMT400024866 Potato cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 16.44 37.37
Bra032037.1-P Field mustard cytosol 48.71 37.21
Bra007785.1-P Field mustard cytosol 47.79 36.26
Bra011351.1-P Field mustard cytosol 47.49 35.62
Bra013599.1-P Field mustard cytosol 42.77 32.6
Zm00001d012717_P002 Maize plasma membrane 50.84 32.4
Bra040606.1-P Field mustard cytosol, plasma membrane, vacuole 29.98 23.76
Bra001068.1-P Field mustard plasma membrane 27.4 23.62
Bra036395.1-P Field mustard cytosol 29.22 23.5
Bra021279.1-P Field mustard nucleus 14.92 17.13
Protein Annotations
Gene3D:1.10.287.630Gene3D:1.10.287.70Gene3D:1.20.120.350Gene3D:2.60.120.10MapMan:24.3.2.2EnsemblPlantsGene:Bra017567
EnsemblPlants:Bra017567.1EnsemblPlants:Bra017567.1-PGO:GO:0003674GO:GO:0005215GO:GO:0005216GO:GO:0005249
GO:GO:0005575GO:GO:0006810GO:GO:0006811GO:GO:0006813GO:GO:0008150GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0034220GO:GO:0055085GO:GO:0071805InterPro:IPR000595
InterPro:IPR014710InterPro:IPR021789InterPro:IPR027359InterPro:Ion_trans_domInterPro:KHA_domInterPro:K_chnl_volt-dep_EAG/ELK/ERG
UniProt:M4DM36PFAM:PF00027PFAM:PF00520PFAM:PF11834PRINTS:PR01463PFscan:PS50042
PFscan:PS51490PANTHER:PTHR10217PANTHER:PTHR10217:SF551InterPro:RmlC-like_jellyrollSMART:SM00100SUPFAM:SSF51206
SUPFAM:SSF81324TMHMM:TMhelixUniParc:UPI0002542534InterPro:Volt_channel_dom_sfInterPro:cNMP-bd-likeInterPro:cNMP-bd_dom
SEG:seg:::::
Description
AT5G46240 (E=7e-292) KAT1 | KAT1 (POTASSIUM CHANNEL IN ARABIDOPSIS THALIANA 1); cyclic nucleotide binding / inward rectifier potassium channel
Coordinates
chrA09:+:16569406..16572569
Molecular Weight (calculated)
75699.0 Da
IEP (calculated)
7.114
GRAVY (calculated)
-0.115
Length
657 amino acids
Sequence
(BLAST)
001: MSISCTRNFF ERFCVEEYNI DTIKHSSFLS ADLLPSLGAR INQSTKLRKH IISPFNPKYR AWEMWLVFLV IYSAWICPFE FAFITYKKDA LFIIDNIING
101: FFAIDIVLTF FVAYLDSHSY LLVDNPKKIT IRYLSTWFAF DVCSTAPFQP LSLLFHYNGS ELGFRILSML RLWRLRRVSS LFARLEKDIR FNYFWIRCTK
201: LISVTLFAVH CAGCFNYLIA DRYPNPRKTW IGAVYPDFKE TSLWNRYVTA LYWSITTLTT TGYGDLHPEN PREMLFDIFF MMFNLGLTAY LIGNMTNLVV
301: HWTSRTRSFR DTVRAASEFA SRNQLPHDIQ DQMLSHICLK FKTEGLKQQE TLNNLPKAIR SSIANYLFFP IVQNIYLFQG VSRDFLFQLV SDIDAEYFPP
401: KEDIILQNEA PTDLYILVSG SVNFTAHVDG QDQIQGKAVV GDMFGEIGVL CYRPQPFTVK TTELSQILRI SRTSLMSAMH VHAEDGRAIM NNLFKKIRGQ
501: QSIAIEDTTN NDQENINFQL MGWEEWMESR KDANGLDVTE STSDNGEKAI MDATHKGDTE TIKKLVKHQH CSSSIQTKPC RGKDKRVTIH MLSQEKDLSQ
601: CHNGKLILLP KSIEELVILA GEKFGGCSFT KITNAENTEI DDLDVIRDGD HLFFSSS
Best Arabidopsis Sequence Match ( AT5G46240.1 )
(BLAST)
001: MSISWTRNFF ERFCVEEYNI DTIKQSSFLS ADLLPSLGAR INQSTKLRKH IISPFNPRYR AWEMWLVLLV IYSAWICPFQ FAFITYKKDA IFIIDNIVNG
101: FFAIDIILTF FVAYLDSHSY LLVDSPKKIA IRYLSTWFAF DVCSTAPFQP LSLLFNYNGS ELGFRILSML RLWRLRRVSS LFARLEKDIR FNYFWIRCTK
201: LISVTLFAIH CAGCFNYLIA DRYPNPRKTW IGAVYPNFKE ASLWNRYVTA LYWSITTLTT TGYGDFHAEN PREMLFDIFF MMFNLGLTAY LIGNMTNLVV
301: HWTSRTRTFR DSVRAASEFA SRNQLPHDIQ DQMLSHICLK FKTEGLKQQE TLNNLPKAIR SSIANYLFFP IVHNIYLFQG VSRNFLFQLV SDIDAEYFPP
401: KEDIILQNEA PTDLYILVSG AVDFTVYVDG HDQFQGKAVI GETFGEVGVL YYRPQPFTVR TTELSQILRI SRTSLMSAMH AHADDGRVIM NNLFMKLRGQ
501: QSIAIDDSNT SGHENRDFKS MGWEEWRDSR KDGYGLDVTN PTSDTALMDA IHKEDTEMVK KILKEQKIER AKVERSSSET AGRSYANDSS KKDPYCSSSN
601: QIIKPCKREE KRVTIHMMSE SKNGKLILLP SSIEELLRLA SEKFGGCNFT KITNADNAEI DDLDVIWDGD HLYFSSN
Arabidopsis Description
KAT1At5g46240 [Source:UniProtKB/TrEMBL;Acc:Q67YG3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.