Factsheet for Os01t0210700-02

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	cytosol

extracellular: 25047395

msms PMID: 25047395 doi

JY Kim, J Wu, SJ Kwon, H Oh, SE Lee, SG Kim, Y Wang, GK Agrawal, R Rakwal, KY Kang, IP Ahn, BG Kim, ST Kim

Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang, South Korea.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0210700-02
Os01t0648000-01
Os01t0756700-01
Os02t0245800-01
Os02t0689200-03
Os05t0428700-01
Os09t0548600-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G46240.1	Os01t0648000-01	AT2G26650.1	15299147
AT5G46240.1	Os05t0428700-01	AT4G22200.1	12034902
AT5G46240.1	Os05t0428700-01	AT4G22200.1	15299147
AT5G46240.1	Os05t0428700-01	AT4G22200.1	17085433
AT5G46240.1	Os02t0689200-03	AT5G41160.1	15299147
AT5G46240.1	Os09t0548600-00	AT5G41160.1	15299147
AT5G46240.1	Os01t0210700-02	AT5G46240.1	11042178
AT5G46240.1	Os01t0756700-01	AT5G46240.1	11042178
AT5G46240.1	Os02t0245800-01	AT5G46240.1	11042178
AT5G46240.1	Os01t0210700-02	AT5G46240.1	15299147
AT5G46240.1	Os01t0756700-01	AT5G46240.1	15299147
AT5G46240.1	Os02t0245800-01	AT5G46240.1	15299147
AT5G46240.1	Os01t0210700-02	AT5G46240.1	17085433
AT5G46240.1	Os01t0756700-01	AT5G46240.1	17085433
AT5G46240.1	Os02t0245800-01	AT5G46240.1	17085433

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G148600.1	Wheat	plasma membrane	78.2	65.37
TraesCS3A01G132400.1	Wheat	plasma membrane	77.87	65.09
TraesCS3B01G167100.1	Wheat	plasma membrane	77.7	64.95
HORVU3Hr1G028670.16	Barley	plasma membrane	76.04	64.46
Zm00001d039386_P001	Maize	plasma membrane	66.72	61.88
Os01t0756700-01	Rice	plasma membrane	49.42	59.16
GSMUA_Achr10P...	Banana	plasma membrane	61.9	56.62
GSMUA_Achr7P09360_001	Banana	plasma membrane	60.57	56.0
GSMUA_Achr6P05630_001	Banana	cytosol, nucleus, plasma membrane	59.07	52.13
Bra017567.1-P	Field mustard	plasma membrane	56.07	51.29
CDY35154	Canola	plasma membrane	56.07	51.29
CDY03233	Canola	plasma membrane	55.74	51.07
AT5G46240.1	Thale cress	plasma membrane	55.74	49.48
CDX78839	Canola	plasma membrane	55.74	48.98
Solyc02g070530.2.1	Tomato	nucleus	55.91	48.84
Bra013296.1-P	Field mustard	plasma membrane	55.57	48.62
CDX99479	Canola	plasma membrane	55.41	48.61
CDY62359	Canola	cytosol, plasma membrane, plastid	53.74	48.5
Solyc08g016500.2.1	Tomato	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	55.07	48.46
CDY33464	Canola	cytosol, plasma membrane, plastid	53.58	48.35
Bra025028.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	53.24	48.05
PGSC0003DMT400054339	Potato	plasma membrane	54.91	47.97
PGSC0003DMT400024968	Potato	cytosol, plasma membrane, vacuole	54.74	47.75
Os02t0245800-01	Rice	plasma membrane	56.91	47.63
AT4G18290.2	Thale cress	mitochondrion, plasma membrane	55.41	47.03
Os01t0718700-00	Rice	endoplasmic reticulum, plasma membrane	28.62	46.11
KRH44805	Soybean	plasma membrane	54.24	44.78
CDX76529	Canola	plasma membrane	51.75	43.68
Bra021012.1-P	Field mustard	plasma membrane	51.75	43.68
KRH21063	Soybean	plasma membrane	56.07	43.37
Os04t0117500-00	Rice	plasma membrane	20.47	43.01
KRH11194	Soybean	plasma membrane	55.57	42.99
VIT_10s0003g03270.t01	Wine grape	plasma membrane	56.41	42.86
Solyc03g058900.1.1	Tomato	cytosol	12.98	40.0
KRH58233	Soybean	cytosol, extracellular, plasma membrane	14.31	38.74
CDY34066	Canola	endoplasmic reticulum, plasma membrane	38.77	38.51
Os06t0254200-00	Rice	plasma membrane, plastid	38.6	38.03
PGSC0003DMT400054318	Potato	nucleus	17.8	33.97
Os01t0648000-01	Rice	plasma membrane	50.58	32.51
Os07t0175400-00	Rice	plastid	37.1	31.36
PGSC0003DMT400024866	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	13.48	28.03
Os05t0428700-01	Rice	cytosol, plastid	23.46	24.91
Os06t0250600-01	Rice	cytosol	30.95	21.68
Os04t0445000-01	Rice	cytosol	14.64	19.38

Protein Annotations

Gene3D:1.10.287.70	Gene3D:2.60.120.10	MapMan:24.3.2.2	EntrezGene:4325560	EMBL:AP014957	ProteinID:BAD73027.1
ProteinID:BAD73049.1	ProteinID:BAF04284.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005216	GO:GO:0005244
GO:GO:0005249	GO:GO:0005267	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005887
GO:GO:0006810	GO:GO:0006811	GO:GO:0006813	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0034220	GO:GO:0034765	GO:GO:0042391	GO:GO:0055085	GO:GO:0071805
EMBL:GQ386814	InterPro:IPR000595	InterPro:IPR014710	InterPro:IPR021789	InterPro:Ion_trans_dom	InterPro:KHA_dom
InterPro:K_chnl_volt-dep_EAG/ELK/ERG	EnsemblPlantsGene:Os01g0210700	EnsemblPlants:Os01t0210700-02	PFAM:PF00027	PFAM:PF00520	PFAM:PF11834
PRINTS:PR01463	PFscan:PS50042	PFscan:PS51490	PANTHER:PTHR10217	PANTHER:PTHR10217:SF495	UniProt:Q5QNI1
InterPro:RmlC-like_jellyroll	SMART:SM00100	SUPFAM:SSF51206	SUPFAM:SSF81324	TMHMM:TMhelix	UniParc:UPI0002104BF8
RefSeq:XP_015614092.1	RefSeq:XP_015614100.1	InterPro:cNMP-bd-like	InterPro:cNMP-bd_dom	SEG:seg	:

Description

SHAKER POTASSIUM CHANNEL 2Similar to Potassium channel (Fragment). (Os01t0210700-01);Inward rectifying shaker-like potassium channel (Os01t0210700-02)

Coordinates

chr1:-:6017745..6022156

Molecular Weight (calculated)

69810.9 Da

IEP (calculated)

8.355

GRAVY (calculated)

-0.076

Length

601 amino acids

Sequence
(BLAST)

001: METISNIFHN DPLPPLGARA NQSIKLRKFI ISPYDSRYRT WETFLLVLVV YSAWICPFEL AYLRNLSWKV SLVDNIIDSF FAIDIILTFF LAYLDQKSYL
101: LVDDPKRIVA RYFSSWFLFD VCSTIPYQLL GQIFKKHENG LAYRLLSMLR LWRLRRLSEL FARLEKDIRL NYYWIRCTKL ISVTLFAVHC SGCFNYLIAD
201: RYPNPARTWI GAAIPNYRSQ NLWVRYVTAI YWSITTLTTT GYGDLHAENQ REMLFSICYM LFNLGLTAYL IGNMTNLVVQ GSCRTRNFRD TIHAASQFAA
301: RNQLPGHIKD EMLSHICLRY KTEGLKQKET LDSLPKGIRS SIACNLFLPV IEKVYLFHGV SFTCMIQLVT EMEAEYYPPR EVVILQNEAP RDVYILVSGA
401: VEERVEIDGT EKVQEVLCNG EIFGEIGVIC SIPQPCAFHT IKVSQLLRLN TAVLKNIIKE NSDDRRVILN NLSQKMNQDH RFSTEVMEKS LQMMHQHFGE
501: YNRCSALNQD NEKNELKANN GHSMALEWKR VTIHMYSQRN KRPEAPLAKV INLPGSLDKL FAIACQKFNN YRLTKLVNPE FAEIDDITVI RDGDHLFFME
601: I

Best Arabidopsis Sequence Match ( AT5G46240.1 )
(BLAST)

001: MSISWTRNFF ERFCVEEYNI DTIKQSSFLS ADLLPSLGAR INQSTKLRKH IISPFNPRYR AWEMWLVLLV IYSAWICPFQ FAFITYKKDA IFIIDNIVNG
101: FFAIDIILTF FVAYLDSHSY LLVDSPKKIA IRYLSTWFAF DVCSTAPFQP LSLLFNYNGS ELGFRILSML RLWRLRRVSS LFARLEKDIR FNYFWIRCTK
201: LISVTLFAIH CAGCFNYLIA DRYPNPRKTW IGAVYPNFKE ASLWNRYVTA LYWSITTLTT TGYGDFHAEN PREMLFDIFF MMFNLGLTAY LIGNMTNLVV
301: HWTSRTRTFR DSVRAASEFA SRNQLPHDIQ DQMLSHICLK FKTEGLKQQE TLNNLPKAIR SSIANYLFFP IVHNIYLFQG VSRNFLFQLV SDIDAEYFPP
401: KEDIILQNEA PTDLYILVSG AVDFTVYVDG HDQFQGKAVI GETFGEVGVL YYRPQPFTVR TTELSQILRI SRTSLMSAMH AHADDGRVIM NNLFMKLRGQ
501: QSIAIDDSNT SGHENRDFKS MGWEEWRDSR KDGYGLDVTN PTSDTALMDA IHKEDTEMVK KILKEQKIER AKVERSSSET AGRSYANDSS KKDPYCSSSN
601: QIIKPCKREE KRVTIHMMSE SKNGKLILLP SSIEELLRLA SEKFGGCNFT KITNADNAEI DDLDVIWDGD HLYFSSN

Arabidopsis Description

KAT1At5g46240 [Source:UniProtKB/TrEMBL;Acc:Q67YG3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.