Factsheet for Zm00001d039386_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, secretory
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d002514_P001
Zm00001d002515_P001
Zm00001d003417_P001
Zm00001d010209_P001
Zm00001d010210_P001
Zm00001d011473_P003
Zm00001d012717_P002
Zm00001d016160_P001
Zm00001d026042_P001
Zm00001d038252_P001
Zm00001d039386_P001
Zm00001d044056_P003
Zm00001d051504_P001
Zm00001d053446_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G46240.1	Zm00001d011473_P003	AT2G26650.1	15299147
AT5G46240.1	Zm00001d044056_P003	AT2G26650.1	15299147
AT5G46240.1	Zm00001d010209_P001	AT4G22200.1	12034902
AT5G46240.1	Zm00001d010210_P001	AT4G22200.1	12034902
AT5G46240.1	Zm00001d038252_P001	AT4G22200.1	12034902
AT5G46240.1	Zm00001d010209_P001	AT4G22200.1	15299147
AT5G46240.1	Zm00001d010210_P001	AT4G22200.1	15299147
AT5G46240.1	Zm00001d038252_P001	AT4G22200.1	15299147
AT5G46240.1	Zm00001d010209_P001	AT4G22200.1	17085433
AT5G46240.1	Zm00001d010210_P001	AT4G22200.1	17085433
AT5G46240.1	Zm00001d038252_P001	AT4G22200.1	17085433
AT5G46240.1	Zm00001d002514_P001	AT5G41160.1	15299147
AT5G46240.1	Zm00001d002515_P001	AT5G41160.1	15299147
AT5G46240.1	Zm00001d003417_P001	AT5G41160.1	15299147
AT5G46240.1	Zm00001d026042_P001	AT5G41160.1	15299147
AT5G46240.1	Zm00001d051504_P001	AT5G41160.1	15299147
AT5G46240.1	Zm00001d012717_P002	AT5G46240.1	11042178
AT5G46240.1	Zm00001d016160_P001	AT5G46240.1	11042178
AT5G46240.1	Zm00001d039386_P001	AT5G46240.1	11042178
AT5G46240.1	Zm00001d053446_P001	AT5G46240.1	11042178
AT5G46240.1	Zm00001d012717_P002	AT5G46240.1	15299147
AT5G46240.1	Zm00001d016160_P001	AT5G46240.1	15299147
AT5G46240.1	Zm00001d039386_P001	AT5G46240.1	15299147
AT5G46240.1	Zm00001d053446_P001	AT5G46240.1	15299147
AT5G46240.1	Zm00001d012717_P002	AT5G46240.1	17085433
AT5G46240.1	Zm00001d016160_P001	AT5G46240.1	17085433
AT5G46240.1	Zm00001d039386_P001	AT5G46240.1	17085433
AT5G46240.1	Zm00001d053446_P001	AT5G46240.1	17085433

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0210700-02	Rice	extracellular	61.88	66.72
TraesCS3B01G167100.1	Wheat	plasma membrane	67.13	60.5
TraesCS3D01G148600.1	Wheat	plasma membrane	66.82	60.22
TraesCS3A01G132400.1	Wheat	plasma membrane	66.67	60.08
HORVU3Hr1G028670.16	Barley	plasma membrane	64.51	58.96
GSMUA_Achr7P09360_001	Banana	plasma membrane	48.77	48.62
GSMUA_Achr10P...	Banana	plasma membrane	49.07	48.4
GSMUA_Achr6P05630_001	Banana	cytosol, nucleus, plasma membrane	47.53	45.23
Bra017567.1-P	Field mustard	plasma membrane	45.22	44.6
CDY35154	Canola	plasma membrane	45.22	44.6
CDY03233	Canola	plasma membrane	44.91	44.36
CDX78839	Canola	plasma membrane	45.22	42.84
Zm00001d016160_P001	Maize	plasma membrane	45.83	42.67
CDX99479	Canola	plasma membrane	45.06	42.63
AT5G46240.1	Thale cress	plasma membrane	44.44	42.54
Bra013296.1-P	Field mustard	plasma membrane	45.06	42.5
Solyc08g016500.2.1	Tomato	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	44.44	42.17
CDY33464	Canola	cytosol, plasma membrane, plastid	43.21	42.04
Solyc02g070530.2.1	Tomato	nucleus	44.6	42.01
CDY62359	Canola	cytosol, plasma membrane, plastid	43.06	41.89
Bra025028.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	42.9	41.74
PGSC0003DMT400054339	Potato	plasma membrane	44.14	41.57
PGSC0003DMT400024968	Potato	cytosol, plasma membrane, vacuole	44.14	41.51
AT4G18290.2	Thale cress	mitochondrion, plasma membrane	44.29	40.54
Zm00001d053446_P001	Maize	plastid	47.22	40.37
KRH44805	Soybean	plasma membrane	45.22	40.25
KRH21063	Soybean	plasma membrane	47.07	39.25
Bra021012.1-P	Field mustard	plasma membrane	42.75	38.9
CDX76529	Canola	plasma membrane	42.75	38.9
KRH11194	Soybean	plasma membrane	46.45	38.74
Solyc03g058900.1.1	Tomato	cytosol	11.57	38.46
VIT_10s0003g03270.t01	Wine grape	plasma membrane	46.45	38.05
Zm00001d010209_P001	Maize	plastid	7.25	33.57
CDY34066	Canola	endoplasmic reticulum, plasma membrane	30.86	33.06
PGSC0003DMT400054318	Potato	nucleus	15.59	32.06
Zm00001d044056_P003	Maize	plasma membrane, plastid	42.13	30.78
PGSC0003DMT400024866	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	13.58	30.45
Zm00001d011723_P002	Maize	cytosol, plasma membrane, plastid	28.86	29.22
Zm00001d011473_P003	Maize	plastid	41.05	29.13
Zm00001d016987_P001	Maize	plasma membrane	26.23	28.86
Zm00001d011729_P002	Maize	cytosol	28.09	28.75
KRH58233	Soybean	cytosol, extracellular, plasma membrane	9.57	27.93
Zm00001d010210_P001	Maize	cytosol, endoplasmic reticulum, plasma membrane	29.63	27.47
Zm00001d018918_P001	Maize	plastid	36.42	25.4
Zm00001d012717_P002	Maize	plasma membrane	40.12	25.22
Zm00001d038252_P001	Maize	plastid	35.49	24.63
Zm00001d037289_P002	Maize	cytosol	25.31	18.81
Zm00001d044717_P001	Maize	cytosol	24.69	18.2
Zm00001d003555_P001	Maize	plasma membrane	20.68	17.99
Zm00001d018924_P001	Maize	cytosol	7.87	11.44

Protein Annotations

Gene3D:1.10.287.70	Gene3D:2.60.120.10	MapMan:24.3.2.2	UniProt:A0A1D6MG59	GO:GO:0003674	GO:GO:0005215
GO:GO:0005216	GO:GO:0005249	GO:GO:0005575	GO:GO:0006810	GO:GO:0006811	GO:GO:0006813
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0034220	GO:GO:0055085
GO:GO:0071805	InterPro:IPR000595	InterPro:IPR014710	InterPro:IPR021789	InterPro:Ion_trans_dom	InterPro:KHA_dom
ProteinID:ONM28541.1	PFAM:PF00027	PFAM:PF00520	PFAM:PF11834	PFscan:PS50042	PFscan:PS51490
PANTHER:PTHR10217	PANTHER:PTHR10217:SF495	InterPro:RmlC-like_jellyroll	SMART:SM00100	SUPFAM:SSF51206	SUPFAM:SSF81324
TMHMM:TMhelix	UniParc:UPI0002207E07	EnsemblPlantsGene:Zm00001d039386	EnsemblPlants:Zm00001d039386_P001	EnsemblPlants:Zm00001d039386_T001	InterPro:cNMP-bd-like
InterPro:cNMP-bd_dom	:	:	:	:	:

Description

potassium channel4 potassium channel4

Coordinates

chr3:+:3100278..3104395

Molecular Weight (calculated)

74287.8 Da

IEP (calculated)

7.060

GRAVY (calculated)

-0.051

Length

648 amino acids

Sequence
(BLAST)

001: MEDISNIFHN DLLPSLGAKA NESIKLRKFI ISPYDSCYRT WETFLLVLVV YSAWICPFEL AFLRHLSWVL FLVENIVNSF FAIDIILTFF LAYLDKKSYL
101: LVDNPKRIAA SMYADISPLG SFLTFAQQFH IKRLVYYLKS MQMASLTEFL TCYGYGAFVA SVIYLPGCFN YLIADRYPNP ARTWIGAARP DYRSESLWVR
201: YVTSIYWSIT TLTTTGYGDL HAENPREMLF SICYMLFNLG LTAYLIGNMT NLVVQGSCRT RNFRDTIHAA SQFASRNQLP EYIRDEMLSH ICLRYKTESL
301: KQKETLDSLP KGIRSGIAYH LFFPVIEKVY LFRGVSYTCM LQLVTAMEAE YFPPRELVIL QNEAPTDVYI LVSGAVEERF VIDGVENKMQ VQGVMYAGEI
401: FGEIGALCSV PQPFTICTTK ISQLLRKGEL ILVLIIWQKT AQDQRFSTEV SGKFLGKLNQ EFRKPNNYSA FNQVGQENES EAKGRVTSCC RNERCKELNE
501: SERCNHVTIH KTAKQDDFNI INSFPAKGES KEKHILTNLM FMESVYRGEA DVHRQILPDS SLTRSEEDGS SVVLEIKRVT IHVYPQQNKK YVPCAKVIKL
601: PGSLDELFNI ACQKFSGYCP TKVFNQEFAE IDDVTVIRDG DRLFLMES

Best Arabidopsis Sequence Match ( AT2G25600.1 )
(BLAST)

001: MEKKKVWFWG VKDDGEGGGG RGGGRTKDAE DDVADHLSRD GTMSQYSLSK GLLPSLGANN RSSRDVILPR FIVSPFDPRY RAWETFLVFL VLYTAWASPF
101: EFGFLQKPRP PLSILDNIVN GFFAVDIVLT FFVAFLDKVT YLLVDDPKRI AWRYASTWLI FDVVSTFPYE IFGSLLHESI QGYGIFSMLR LWRLRRVSNC
201: FARLEKDRKY SYFWVRCSKL LLVTLFVIHC GACFLYSIAA HYPDPSKTFM ALTDENWKES PIAVRYNTAM YWSITTFSTT GYGDIHGVNS REMTFILFYM
301: VFNLGLSAYI IGNMTNLVVH VTGRTRKFRD TIQAASGFGQ RNNLPVRLQD QMVAHLCLRY RTDSEGLQQQ EIIDSLPKAI RSSISHYLFY EVVDKIYLFH
401: GISNDLLFQL VTEMKAEYFP PKEDVILQNE APTDFYILVT GAVDIIARVN GVEQVVSEAQ RGHVFGEVGV LCYRPQLFTV RTKRLSQLLR LNRTVLLNLV
501: QANVGDGAII MNNLLQHLKD SEDPVMKGVL ADTEHMLAQG KMDLPLSLCF AAARGDDLLL HQLLRRGSSP NEMDKDGRTA LHIAASKGSH YCVVLLLEHG
601: ADPNIRDSEG NVPLWEAIIG RHREIAKLLA ENGAKLSLDS VSYFSGLAVE KNCLDALKDI IKYGGDVTLP DGNGTTALHR AVSEGHLEIV KFLLDQGADL
701: DWPDSYGWTP RGLADHQGNE EIKTLFHNHR PVEKKPKPIP GIPQSPVTGK PLMKYSSEPT MHSGELVLDG GQVVVSQKRK LNNFRNSLFG IISAANSADD
801: GGEVPRSPAV PGGGGSMIYP ERVTISSPEN GETGGKVVLL PNSMEELLKI GENKMGFVPT KVLTREGAEI DDITLIRDGD FLLLSRDP

Arabidopsis Description

AKT6Potassium channel AKT6 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXE6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.