Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g070530.2.1 | Tomato | nucleus | 96.51 | 96.51 |
| PGSC0003DMT400024968 | Potato | cytosol, plasma membrane, vacuole | 64.39 | 64.3 |
| CDY03233 | Canola | plasma membrane | 58.58 | 61.43 |
| Bra017567.1-P | Field mustard | plasma membrane | 58.43 | 61.19 |
| CDY35154 | Canola | plasma membrane | 58.43 | 61.19 |
| CDX78839 | Canola | plasma membrane | 60.61 | 60.96 |
| CDX99479 | Canola | plasma membrane | 60.32 | 60.58 |
| Bra013296.1-P | Field mustard | plasma membrane | 60.47 | 60.55 |
| AT5G46240.1 | Thale cress | plasma membrane | 58.43 | 59.38 |
| AT4G18290.2 | Thale cress | mitochondrion, plasma membrane | 61.05 | 59.32 |
| KRH44805 | Soybean | plasma membrane | 62.5 | 59.07 |
| CDY33464 | Canola | cytosol, plasma membrane, plastid | 56.4 | 58.26 |
| TraesCS3D01G294000.1 | Wheat | mitochondrion, plasma membrane | 42.3 | 57.97 |
| Os01t0756700-01 | Rice | plasma membrane | 42.3 | 57.97 |
| Bra025028.1-P | Field mustard | cytosol, endoplasmic reticulum, plasma membrane | 56.1 | 57.96 |
| CDY62359 | Canola | cytosol, plasma membrane, plastid | 55.96 | 57.81 |
| TraesCS3B01G328800.1 | Wheat | plasma membrane | 42.3 | 57.62 |
| TraesCS3A01G294200.1 | Wheat | mitochondrion, plasma membrane | 41.86 | 57.6 |
| GSMUA_Achr10P... | Banana | plasma membrane | 54.65 | 57.23 |
| EES01496 | Sorghum | mitochondrion, plasma membrane | 43.6 | 56.6 |
| GSMUA_Achr7P09360_001 | Banana | plasma membrane | 52.76 | 55.85 |
| VIT_10s0003g03270.t01 | Wine grape | plasma membrane | 63.95 | 55.63 |
| KRH11194 | Soybean | plasma membrane | 62.21 | 55.08 |
| Os01t0210700-02 | Rice | extracellular | 47.97 | 54.91 |
| KRH21063 | Soybean | plasma membrane | 61.77 | 54.7 |
| HORVU3Hr1G072850.15 | Barley | plastid | 40.7 | 54.69 |
| GSMUA_Achr6P05630_001 | Banana | cytosol, nucleus, plasma membrane | 52.62 | 53.16 |
| CDX76529 | Canola | plasma membrane | 54.8 | 52.95 |
| Bra021012.1-P | Field mustard | plasma membrane | 54.65 | 52.81 |
| GSMUA_Achr6P26910_001 | Banana | endoplasmic reticulum, peroxisome, plasma membrane | 53.49 | 50.48 |
| GSMUA_Achr9P06470_001 | Banana | plasma membrane | 52.91 | 50.42 |
| Os02t0245800-01 | Rice | plasma membrane | 51.74 | 49.58 |
| CDY34066 | Canola | endoplasmic reticulum, plasma membrane | 43.31 | 49.26 |
| GSMUA_Achr8P27260_001 | Banana | plasma membrane | 51.6 | 48.97 |
| GSMUA_Achr2P09100_001 | Banana | plasma membrane, vacuole | 52.91 | 48.92 |
| EES06576 | Sorghum | plasma membrane | 51.45 | 48.56 |
| TraesCS6A01G160500.1 | Wheat | plasma membrane | 50.87 | 48.21 |
| HORVU3Hr1G028670.16 | Barley | plasma membrane | 49.42 | 47.95 |
| TraesCS6D01G152200.1 | Wheat | plasma membrane | 50.44 | 47.8 |
| TraesCS6B01G190900.1 | Wheat | plasma membrane | 50.0 | 47.45 |
| TraesCS3D01G148600.1 | Wheat | plasma membrane | 49.27 | 47.15 |
| TraesCS3A01G132400.1 | Wheat | plasma membrane | 49.13 | 47.01 |
| TraesCS3B01G167100.1 | Wheat | plasma membrane | 49.13 | 47.01 |
| PGSC0003DMT400024866 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 19.62 | 46.71 |
| PGSC0003DMT400054318 | Potato | nucleus | 21.08 | 46.03 |
| Zm00001d016160_P001 | Maize | plasma membrane | 46.51 | 45.98 |
| Zm00001d053446_P001 | Maize | plastid | 50.58 | 45.91 |
| PGSC0003DMT400091020 | Potato | peroxisome, plasma membrane | 40.41 | 45.5 |
| Zm00001d039386_P001 | Maize | plasma membrane | 41.57 | 44.14 |
| PGSC0003DMT400065964 | Potato | cytosol, plastid | 39.97 | 43.58 |
| PGSC0003DMT400037608 | Potato | plastid | 39.24 | 43.34 |
| KRH58233 | Soybean | cytosol, extracellular, plasma membrane | 13.52 | 41.89 |
| PGSC0003DMT400002746 | Potato | plasma membrane | 48.69 | 38.33 |
| PGSC0003DMT400061090 | Potato | cytosol | 42.73 | 35.68 |
| PGSC0003DMT400074787 | Potato | cytosol, nucleus, plasma membrane | 43.6 | 34.84 |
| PGSC0003DMT400062100 | Potato | plasma membrane | 41.72 | 34.09 |
| Zm00001d012717_P002 | Maize | plasma membrane | 44.91 | 29.97 |
| PGSC0003DMT400034446 | Potato | cytosol | 27.76 | 23.07 |
Protein Annotations
| Gene3D:1.10.287.630 | Gene3D:1.10.287.70 | EntrezGene:102583546 | Gene3D:2.60.120.10 | MapMan:24.3.2.2 | ProteinID:CAA56175 |
| ProteinID:CAA56175.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005216 | GO:GO:0005249 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006811 | GO:GO:0006813 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0034220 | GO:GO:0055085 | GO:GO:0071805 | InterPro:IPR000595 |
| InterPro:IPR014710 | InterPro:IPR021789 | InterPro:Ion_trans_dom | InterPro:KHA_dom | InterPro:K_chnl_volt-dep_EAG/ELK/ERG | RefSeq:NP_001275475.1 |
| PFAM:PF00027 | PFAM:PF00520 | PFAM:PF11834 | EnsemblPlantsGene:PGSC0003DMG400021091 | PGSC:PGSC0003DMG400021091 | EnsemblPlants:PGSC0003DMT400054339 |
| PRINTS:PR01463 | PFscan:PS50042 | PFscan:PS51490 | PANTHER:PTHR10217 | PANTHER:PTHR10217:SF551 | UniProt:Q41461 |
| InterPro:RmlC-like_jellyroll | SMART:SM00100 | SUPFAM:SSF51206 | SUPFAM:SSF81324 | TMHMM:TMhelix | UniParc:UPI00000A5FAA |
| EMBL:X79779 | InterPro:cNMP-bd-like | InterPro:cNMP-bd_dom | SEG:seg | : | : |
Description
K+ channel inward rectifying [Source:PGSC_GENE;Acc:PGSC0003DMG400021091]
Coordinates
chr2:-:29708438..29712521
Molecular Weight (calculated)
78869.3 Da
IEP (calculated)
7.374
GRAVY (calculated)
-0.082
Length
688 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFSYAKNCL QRFCVDEFQM DTETTHSGFF SSDLLPSLGA RINYATKLRR FIISPFNPRY RCWEMFLVVM VIYTAWISLF EVAFLSYKKD DTLFIVDNIV
101: DCFFAIDILL TFFVAYLHRE SYLLVDEPKK IAIRYLSTWF IFDVCSTVPF QSLILVFTGH KESGGVGFRL LSMLRLWRLR RVSALFARLE KDIRFNYFWT
201: RCTKLVSVTL FAVHCAGCIN YMIADRYPDS KKTWIGAVYP DFKQLSVGDR YITSLYWSIV TLTTTGYGDL HAENSREMLF DIFYMLFNLG LTSYIIGNMT
301: NLVVHWTSRT RNFREAVKAA QEFAKRNQLP PRVQDQVLSH MCLKFKTETL KQEETLNGLP KAIRTSIAHH LFFPIVQNVH LFQGVSRNLL FQLVPEMEAE
401: YFPPKQEVIL QNEAPTDLYI IVSGAVEFIA QIEGLEQIIG KAVAGEIFGD IGVLCGRPQP FAVRTTEISQ ILRLSRTSLM NILRANPEDE CIIMNNLLMK
501: LQGFGGFGYV DHQTNAGPEI KRHDDITLTS IDINNLEARV KKQERDDGQE VNKTMNDLSL NLENKSELSE HKVELIGPDE GTKSCQLKPE VPSCSNSCLK
601: RPTCSTSSSG SQGTKSTHHK KRITIHVKKE SLHQQFGKLI ILPDSLQELF RVAGQRFGSY DFKRAVNAED AEIDDIDVIR DGDHLFFL
101: DCFFAIDILL TFFVAYLHRE SYLLVDEPKK IAIRYLSTWF IFDVCSTVPF QSLILVFTGH KESGGVGFRL LSMLRLWRLR RVSALFARLE KDIRFNYFWT
201: RCTKLVSVTL FAVHCAGCIN YMIADRYPDS KKTWIGAVYP DFKQLSVGDR YITSLYWSIV TLTTTGYGDL HAENSREMLF DIFYMLFNLG LTSYIIGNMT
301: NLVVHWTSRT RNFREAVKAA QEFAKRNQLP PRVQDQVLSH MCLKFKTETL KQEETLNGLP KAIRTSIAHH LFFPIVQNVH LFQGVSRNLL FQLVPEMEAE
401: YFPPKQEVIL QNEAPTDLYI IVSGAVEFIA QIEGLEQIIG KAVAGEIFGD IGVLCGRPQP FAVRTTEISQ ILRLSRTSLM NILRANPEDE CIIMNNLLMK
501: LQGFGGFGYV DHQTNAGPEI KRHDDITLTS IDINNLEARV KKQERDDGQE VNKTMNDLSL NLENKSELSE HKVELIGPDE GTKSCQLKPE VPSCSNSCLK
601: RPTCSTSSSG SQGTKSTHHK KRITIHVKKE SLHQQFGKLI ILPDSLQELF RVAGQRFGSY DFKRAVNAED AEIDDIDVIR DGDHLFFL
001: MSISWTRNFF ERFCVEEYNI DTIKQSSFLS ADLLPSLGAR INQSTKLRKH IISPFNPRYR AWEMWLVLLV IYSAWICPFQ FAFITYKKDA IFIIDNIVNG
101: FFAIDIILTF FVAYLDSHSY LLVDSPKKIA IRYLSTWFAF DVCSTAPFQP LSLLFNYNGS ELGFRILSML RLWRLRRVSS LFARLEKDIR FNYFWIRCTK
201: LISVTLFAIH CAGCFNYLIA DRYPNPRKTW IGAVYPNFKE ASLWNRYVTA LYWSITTLTT TGYGDFHAEN PREMLFDIFF MMFNLGLTAY LIGNMTNLVV
301: HWTSRTRTFR DSVRAASEFA SRNQLPHDIQ DQMLSHICLK FKTEGLKQQE TLNNLPKAIR SSIANYLFFP IVHNIYLFQG VSRNFLFQLV SDIDAEYFPP
401: KEDIILQNEA PTDLYILVSG AVDFTVYVDG HDQFQGKAVI GETFGEVGVL YYRPQPFTVR TTELSQILRI SRTSLMSAMH AHADDGRVIM NNLFMKLRGQ
501: QSIAIDDSNT SGHENRDFKS MGWEEWRDSR KDGYGLDVTN PTSDTALMDA IHKEDTEMVK KILKEQKIER AKVERSSSET AGRSYANDSS KKDPYCSSSN
601: QIIKPCKREE KRVTIHMMSE SKNGKLILLP SSIEELLRLA SEKFGGCNFT KITNADNAEI DDLDVIWDGD HLYFSSN
101: FFAIDIILTF FVAYLDSHSY LLVDSPKKIA IRYLSTWFAF DVCSTAPFQP LSLLFNYNGS ELGFRILSML RLWRLRRVSS LFARLEKDIR FNYFWIRCTK
201: LISVTLFAIH CAGCFNYLIA DRYPNPRKTW IGAVYPNFKE ASLWNRYVTA LYWSITTLTT TGYGDFHAEN PREMLFDIFF MMFNLGLTAY LIGNMTNLVV
301: HWTSRTRTFR DSVRAASEFA SRNQLPHDIQ DQMLSHICLK FKTEGLKQQE TLNNLPKAIR SSIANYLFFP IVHNIYLFQG VSRNFLFQLV SDIDAEYFPP
401: KEDIILQNEA PTDLYILVSG AVDFTVYVDG HDQFQGKAVI GETFGEVGVL YYRPQPFTVR TTELSQILRI SRTSLMSAMH AHADDGRVIM NNLFMKLRGQ
501: QSIAIDDSNT SGHENRDFKS MGWEEWRDSR KDGYGLDVTN PTSDTALMDA IHKEDTEMVK KILKEQKIER AKVERSSSET AGRSYANDSS KKDPYCSSSN
601: QIIKPCKREE KRVTIHMMSE SKNGKLILLP SSIEELLRLA SEKFGGCNFT KITNADNAEI DDLDVIWDGD HLYFSSN
Arabidopsis Description
KAT1At5g46240 [Source:UniProtKB/TrEMBL;Acc:Q67YG3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.