Factsheet for GSMUA_Achr2P09100_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole

Predictor Summary:

nucleus 1
vacuole 4
extracellular 3
golgi 3
plasma membrane 4
endoplasmic reticulum 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, vacuole
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr2P09100_001
GSMUA_Achr3P20680_001
GSMUA_Achr4P08990_001
GSMUA_Achr4P09000_001
GSMUA_Achr5P09840_001
GSMUA_Achr5P12690_001
GSMUA_Achr6P05630_001
GSMUA_Achr6P07280_001
GSMUA_Achr6P24240_001
GSMUA_Achr6P26910_001
GSMUA_Achr7P09360_001
GSMUA_Achr8P27260_001
GSMUA_Achr9P06470_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G46240.1	GSMUA_Achr3P20680_001	AT2G26650.1	15299147
AT5G46240.1	GSMUA_Achr4P08990_001	AT2G26650.1	15299147
AT5G46240.1	GSMUA_Achr4P09000_001	AT2G26650.1	15299147
AT5G46240.1	GSMUA_Achr5P09840_001	AT2G26650.1	15299147
AT5G46240.1	GSMUA_AchrUn_...	AT2G26650.1	15299147
AT5G46240.1	GSMUA_Achr6P07280_001	AT4G22200.1	12034902
AT5G46240.1	GSMUA_Achr6P24240_001	AT4G22200.1	12034902
AT5G46240.1	GSMUA_Achr6P07280_001	AT4G22200.1	15299147
AT5G46240.1	GSMUA_Achr6P24240_001	AT4G22200.1	15299147
AT5G46240.1	GSMUA_Achr6P07280_001	AT4G22200.1	17085433
AT5G46240.1	GSMUA_Achr6P24240_001	AT4G22200.1	17085433
AT5G46240.1	GSMUA_Achr10P...	AT5G41160.1	15299147
AT5G46240.1	GSMUA_Achr5P12690_001	AT5G41160.1	15299147
AT5G46240.1	GSMUA_Achr10P...	AT5G46240.1	11042178
AT5G46240.1	GSMUA_Achr2P09100_001	AT5G46240.1	11042178
AT5G46240.1	GSMUA_Achr6P05630_001	AT5G46240.1	11042178
AT5G46240.1	GSMUA_Achr6P26910_001	AT5G46240.1	11042178
AT5G46240.1	GSMUA_Achr7P09360_001	AT5G46240.1	11042178
AT5G46240.1	GSMUA_Achr8P27260_001	AT5G46240.1	11042178
AT5G46240.1	GSMUA_Achr9P06470_001	AT5G46240.1	11042178
AT5G46240.1	GSMUA_Achr10P...	AT5G46240.1	15299147
AT5G46240.1	GSMUA_Achr2P09100_001	AT5G46240.1	15299147
AT5G46240.1	GSMUA_Achr6P05630_001	AT5G46240.1	15299147
AT5G46240.1	GSMUA_Achr6P26910_001	AT5G46240.1	15299147
AT5G46240.1	GSMUA_Achr7P09360_001	AT5G46240.1	15299147
AT5G46240.1	GSMUA_Achr8P27260_001	AT5G46240.1	15299147
AT5G46240.1	GSMUA_Achr9P06470_001	AT5G46240.1	15299147
AT5G46240.1	GSMUA_Achr10P...	AT5G46240.1	17085433
AT5G46240.1	GSMUA_Achr2P09100_001	AT5G46240.1	17085433
AT5G46240.1	GSMUA_Achr6P05630_001	AT5G46240.1	17085433
AT5G46240.1	GSMUA_Achr6P26910_001	AT5G46240.1	17085433
AT5G46240.1	GSMUA_Achr7P09360_001	AT5G46240.1	17085433
AT5G46240.1	GSMUA_Achr8P27260_001	AT5G46240.1	17085433
AT5G46240.1	GSMUA_Achr9P06470_001	AT5G46240.1	17085433

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P26910_001	Banana	endoplasmic reticulum, peroxisome, plasma membrane	71.64	73.11
GSMUA_Achr9P06470_001	Banana	plasma membrane	70.83	72.99
GSMUA_Achr8P27260_001	Banana	plasma membrane	70.16	72.0
GSMUA_Achr7P09360_001	Banana	plasma membrane	54.3	62.15
GSMUA_Achr10P...	Banana	plasma membrane	54.3	61.49
GSMUA_Achr6P05630_001	Banana	cytosol, nucleus, plasma membrane	52.55	57.42
CDY03233	Canola	plasma membrane	49.87	56.55
Bra017567.1-P	Field mustard	plasma membrane	49.87	56.47
CDY35154	Canola	plasma membrane	49.87	56.47
CDX99479	Canola	plasma membrane	51.61	56.06
CDX78839	Canola	plasma membrane	51.48	55.99
Bra013296.1-P	Field mustard	plasma membrane	51.21	55.46
CDY33464	Canola	cytosol, plasma membrane, plastid	48.92	54.65
CDY62359	Canola	cytosol, plasma membrane, plastid	48.92	54.65
AT5G46240.1	Thale cress	plasma membrane	49.6	54.51
Bra025028.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	48.66	54.35
Solyc02g070530.2.1	Tomato	nucleus	50.13	54.22
AT4G18290.2	Thale cress	mitochondrion, plasma membrane	51.34	53.95
PGSC0003DMT400054339	Potato	plasma membrane	48.92	52.91
KRH44805	Soybean	plasma membrane	51.34	52.47
Solyc08g016500.2.1	Tomato	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	47.31	51.54
GSMUA_Achr4P09000_001	Banana	plasma membrane	38.44	51.16
KRH21063	Soybean	plasma membrane	53.36	51.09
KRH11194	Soybean	plasma membrane	53.23	50.97
PGSC0003DMT400024968	Potato	cytosol, plasma membrane, vacuole	46.77	50.51
CDX76529	Canola	plasma membrane	47.85	50.0
Bra021012.1-P	Field mustard	plasma membrane	47.72	49.86
VIT_10s0003g03270.t01	Wine grape	plasma membrane	52.02	48.93
Solyc03g058900.1.1	Tomato	cytosol	12.37	47.18
CDY34066	Canola	endoplasmic reticulum, plasma membrane	37.1	45.62
GSMUA_Achr1P05260_001	Banana	plasma membrane	36.29	42.65
GSMUA_Achr5P09770_001	Banana	plasma membrane	36.56	41.65
KRH58233	Soybean	cytosol, extracellular, plasma membrane	12.37	41.44
GSMUA_Achr3P20680_001	Banana	cytosol, nucleus, plasma membrane	43.41	40.22
GSMUA_Achr4P08990_001	Banana	cytosol, mitochondrion, plasma membrane	43.68	39.83
GSMUA_AchrUn_...	Banana	plasma membrane	42.07	39.57
GSMUA_Achr5P09840_001	Banana	plasma membrane	43.41	39.39
PGSC0003DMT400054318	Potato	nucleus	15.73	37.14
GSMUA_Achr6P24240_001	Banana	cytosol	37.5	34.88
PGSC0003DMT400024866	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	13.31	34.26
GSMUA_Achr6P07280_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	37.5	33.86
GSMUA_Achr8P22960_001	Banana	nucleus, peroxisome, plasma membrane	10.75	26.67
GSMUA_Achr3P16730_001	Banana	plasma membrane	23.92	24.65
GSMUA_Achr9P15840_001	Banana	cytosol, mitochondrion, plasma membrane, vacuole	25.94	22.84
GSMUA_Achr8P22950_001	Banana	cytosol	15.86	21.81

Protein Annotations

Gene3D:1.10.287.630	Gene3D:1.10.287.70	Gene3D:2.60.120.10	MapMan:24.3.2.2	GO:GO:0003674	GO:GO:0005215
GO:GO:0005216	GO:GO:0005249	GO:GO:0005575	GO:GO:0006810	GO:GO:0006811	GO:GO:0006813
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0034220	GO:GO:0055085
GO:GO:0071805	EnsemblPlantsGene:GSMUA_Achr2G09100_001	EnsemblPlants:GSMUA_Achr2P09100_001	EnsemblPlants:GSMUA_Achr2T09100_001	InterPro:IPR000595	InterPro:IPR014710
InterPro:IPR021789	InterPro:Ion_trans_dom	InterPro:KHA_dom	InterPro:K_chnl_volt-dep_EAG/ELK/ERG	UniProt:M0S6F1	PFAM:PF00027
PFAM:PF00520	PFAM:PF11834	PRINTS:PR01463	PFscan:PS50042	PFscan:PS51490	PANTHER:PTHR10217
PANTHER:PTHR10217:SF551	InterPro:RmlC-like_jellyroll	SMART:SM00100	SUPFAM:SSF51206	SUPFAM:SSF81324	TMHMM:TMhelix
UniParc:UPI000294C583	InterPro:cNMP-bd-like	InterPro:cNMP-bd_dom	:	:	:

Description

Potassium channel KAT2 [Source:GMGC_GENE;Acc:GSMUA_Achr2G09100_001]

Coordinates

chr2:+:12878231..12882075

Molecular Weight (calculated)

85819.6 Da

IEP (calculated)

7.640

GRAVY (calculated)

-0.147

Length

744 amino acids

Sequence
(BLAST)

001: MSFPSRELFL IQSFLCIDQA AHLIKDISQT ATFTTLYILD LSRVPLPLNI RSQRHHSATM LCSCMNCLQH FGNDSFQLES GGYSMHNDLL PSLGATINHT
101: IKLRKHIVSP YDPRYRLWEK FLIVLVLYSA WICPFEFAFR RYLPSTIFLV DNIINSFFAI DIVLTFFVAF VDHKSYLLVD EPKRIAVRYL STWFIFDACS
201: TFPFQTISFL FNGHSKSLGF KLLSVLRLWR LHRVNSLFAR LEKDIRFNYF WTRCTKLFSV TLFAVHCSGC FNYMIADRYP DPERTWIGAV IPNFMEHNLW
301: VRYVTAIYWS ITTLTTTGYG DLHAENTREM VFGICYMLFN LGLTSYLIGN MTNLVVHGTS RTKNFRDTIQ AASEFASRNK LPKHMEEQML SHICLRFKTE
401: GLKQQETLDG LPKAIRSSIA EYLFFPIVQK VYLFQGFSFN LIFQLVTEMQ AEYYPPKEDV ILQNEAPAYL YIIVSGAVDM RASADGVEKV HGRLTAGEIF
501: GEIGVLCNMS QPFTIRTTEL TQILRLNRTT LFNIIRQSRQ DATIVMNNLS QNLRLHESLY PGIQQNEPGE LLKRWLERDP WKRNENHAPD GNNYQVCKLH
601: TQELMDKCKS PGNAEKNKDN GTPNEFPIGQ VNAKLDHADR HSVFHTVAQD GYNITANILL KQEATIEEDK DNRVTIHMHS QKGNPARQLT AKMINLPGTM
701: EELLRIGSEK FVGHHPTKVI NQENAEIDDI TIVRDGDHLY LLEI

Best Arabidopsis Sequence Match ( AT4G18290.1 )
(BLAST)

001: MSISCTRNFF KRFCVEEYNM DTFKHSSFLS ADLLPSLGAR INQSTKLRKH IISPFDPRFR GWEMWLVILV IYSAWICPFE FAFITYKKDA LFIIDNIVNG
101: FFAIDIILTF FVAYLDSHSY LLVDKPKKIA IRYLSTWFAF DVCSTAPFQS LSLLFKYNGS EIGFRVLSML RLWRLRRVSS LFARLEKDIR FNYFWTRCTK
201: LISVTLFAVH CAGCFAYLIA DQYHDPTKTW IGAVYPNFKE TSVWSRYVTA LYWSITTLTT TGYGDLHAEN PREMLFFVFF MLFNLGFTSY LIGNMTNLVV
301: HWTSRTRNFR DTVRAASEFA SRNQLPPNIQ DQMLSHICLK FKTEGLKQQE ALNGLPKAIR SSIANYLFFP IVQNVYLFHG VSRNFLFQLV SDIDAEYFPP
401: REDVILQNEA PTDLYILVSG AVDFTVYVGE EDQVQGKAVV GDAFGEIGVL CYTPQPFTVR TTELSQILRI SKKSLMSAMR AHVEDGRVIM NNLFMKLRGQ
501: QSIAIDDPNS EPESLLKEWL VGGSKTGEGN ASDQGHGHKY LQLHDSENID MGSTEWRDSR RSGYGETKRV REHTIEIEEG EKPNKEFDGK GCSDADLTSF
601: EFHSQEAYPY CRSNIQIKQH EAAKPKDKRV TIHLKSRDKD LSKLIILPAS IEELLRLAGE KFGYSFTKVT NAENAEIDDE DVIRDGDHLY ILINENS

Arabidopsis Description

KAT2potassium channel in Arabidopsis thaliana 2 [Source:TAIR;Acc:AT4G18290]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.