Factsheet for GSMUA_Achr3P16730_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0445000-01	Rice	cytosol	41.0	65.2
VIT_18s0089g01300.t01	Wine grape	plasma membrane	65.79	65.07
EES10868	Sorghum	cytosol	64.96	64.69
TraesCS2B01G329800.1	Wheat	plasma membrane	62.74	62.66
TraesCS2A01G312800.1	Wheat	plasma membrane	62.47	62.38
TraesCS2D01G311300.1	Wheat	plasma membrane	62.6	59.47
HORVU2Hr1G077680.12	Barley	cytosol	62.19	58.54
Zm00001d003555_P001	Maize	plasma membrane	60.11	58.26
GSMUA_Achr8P22950_001	Banana	cytosol	38.09	50.83
GSMUA_Achr8P22960_001	Banana	nucleus, peroxisome, plasma membrane	21.05	50.67
GSMUA_Achr9P15840_001	Banana	cytosol, mitochondrion, plasma membrane, vacuole	54.43	46.51
GSMUA_Achr4P09000_001	Banana	plasma membrane	23.55	30.41
GSMUA_Achr5P09840_001	Banana	plasma membrane	33.1	29.15
GSMUA_Achr3P20680_001	Banana	cytosol, nucleus, plasma membrane	32.27	29.02
GSMUA_AchrUn_...	Banana	plasma membrane	31.16	28.45
GSMUA_Achr4P08990_001	Banana	cytosol, mitochondrion, plasma membrane	31.72	28.06
GSMUA_Achr6P24240_001	Banana	cytosol	30.33	27.38
GSMUA_Achr1P05260_001	Banana	plasma membrane	23.68	27.01
GSMUA_Achr5P09770_001	Banana	plasma membrane	24.1	26.65
GSMUA_Achr6P07280_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	30.33	26.58
GSMUA_Achr7P09360_001	Banana	plasma membrane	23.68	26.31
GSMUA_Achr10P...	Banana	plasma membrane	23.68	26.03
GSMUA_Achr8P27260_001	Banana	plasma membrane	25.9	25.79
GSMUA_Achr6P05630_001	Banana	cytosol, nucleus, plasma membrane	22.99	24.38
GSMUA_Achr9P06470_001	Banana	plasma membrane	23.96	23.96
GSMUA_Achr2P09100_001	Banana	plasma membrane, vacuole	24.65	23.92
GSMUA_Achr6P26910_001	Banana	endoplasmic reticulum, peroxisome, plasma membrane	23.82	23.59

Protein Annotations

Gene3D:1.10.287.630	Gene3D:1.10.287.70	Gene3D:1.25.40.20	Gene3D:2.60.120.10	MapMan:24.3.2.2	InterPro:Ankyrin_rpt
InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	GO:GO:0003674	GO:GO:0005215	GO:GO:0005216	GO:GO:0005249
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0006810	GO:GO:0006811	GO:GO:0006813
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0034220	GO:GO:0055085
GO:GO:0071805	EnsemblPlantsGene:GSMUA_Achr3G16730_001	EnsemblPlants:GSMUA_Achr3P16730_001	EnsemblPlants:GSMUA_Achr3T16730_001	InterPro:IPR000595	InterPro:IPR002110
InterPro:IPR014710	InterPro:IPR020683	InterPro:IPR036770	InterPro:Ion_trans_dom	InterPro:K_chnl_volt-dep_EAG/ELK/ERG	UniProt:M0SF89
PFAM:PF00027	PFAM:PF00520	PFAM:PF12796	PFAM:PF13857	PRINTS:PR01415	PRINTS:PR01463
PFscan:PS50042	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR10217	PANTHER:PTHR10217:SF478	InterPro:RmlC-like_jellyroll
SMART:SM00100	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF51206	SUPFAM:SSF81324	TMHMM:TMhelix
UniParc:UPI000296B974	InterPro:cNMP-bd-like	InterPro:cNMP-bd_dom	:	:	:

Description

Potassium channel SKOR [Source:GMGC_GENE;Acc:GSMUA_Achr3G16730_001]

Coordinates

chr3:+:18017428..18023584

Molecular Weight (calculated)

81895.2 Da

IEP (calculated)

7.214

GRAVY (calculated)

-0.036

Length

722 amino acids

Sequence
(BLAST)

001: MGEEVNGEFE LNEVADNIEG SVGSRLSWIS REYGLGNRKW SSGTKLKVSR DCYRSFVINP NGSRSYRIWV DVVFVWSIYS AFFTPLEFGF FRGLPELLKD
101: LDCVQVIFLA DVVFQFFVAY RDAHTYKMIC DRRRIALRYL KGSFAVDLLG CVPWDSIYKM MGVEAIRFLI WVRIFRARKI NQFFKTMEKD IKINYLFTRI
201: VKLIMVELYC THTAACVFYY LATTVPPAQE GYTWIGSLSM GDYQYTNFRE IDFWRRYITS LYFSIGTLAT VGYGDVHAVN TREMVFSMIY ISLTMILGAY
301: LIGNMTALIV KGSKTEQFRD KMTDLIKYMN RNKLGKDIRS QIKNHLRLQY ESSYNKESVL EDVPMALRSK ISQILYLDVI QKVPLFQGCS DEFLNQIVMM
401: LNEEFFLPGE VVIEQGSPAD QVYIILLGYL EAVAVREDGS EESIAKLTTY DALGDAAALC NIPQRYTVRV CELCRLLRIE KQSLANISQL YFKDGNQMLV
501: NLLKGKGSEL SIKQLEPDIK YLISKQEAEL ALGVNSAAYH GDISRLQVLI NAGADPNKTD YDGRTALHMA ACKGHEQVVK FLIQRGSNTN CIDKFGTSPL
601: FETLKTGNDR IAAILVENGA ILNLDDAGNY LCEVVTNGNI DLLRCLLEYG ANPNSKNYDR RTPLHVAASE GLHLMANILI EFGANVLSKD RWGNTPVDEG
701: HRCGSKPLIK ILEDAVVNHA GK

Best Arabidopsis Sequence Match ( AT3G02850.2 )
(BLAST)

001: MGGSSGGGVS YRSGGESDVE LEDYEVDDFR DGIVESRGNR FNPLTNFLGL DFAGGSGGKF TVINGIRDIS RGSIVHPDNR WYKAWTMFIL IWALYSSFFT
101: PLEFGFFRGL PENLFILDIA GQIAFLVDIV LTFFVAYRDS RTYRMIYKRS SIALRYLKST FIIDLLACMP WDIIYKAAGE KEEVRYLLLI RLYRVHRVIL
201: FFHKMEKDIR INYLFTRIVK LIFVELYCTH TAACIFYYLA TTLPASQEGY TWIGSLKLGD YSYSKFREID LWTRYTTSMY FAVVTMATVG YGDIHAVNMR
301: EMIFAMVYIS FDMILGAYLI GNMTALIVKG SKTERFRDKM ADIMRYMNRN KLGRNIRGQI TGHLRLQYES SYTEAAVLQD IPVSIRAKIA QTLYLPYIEK
401: VPLFRGCSSE FINQIVIRLH EEFFLPGEVI MEQGSVVDQL YFVCHGVLEE IGITKDGSEE IVAVLQPDHS FGEISILCNI PQPYTVRVAE LCRILRLDKQ
501: SFMNILEIFF HDGRRILNNL LEGKESNVRI KQLESDITFH ISKQEAELAL KLNSAAFYGD LYQLKSLIRA GGDPNKTDYD GRSPLHLAAS RGYEDITLYL
601: IQESVDVNIK DKLGSTPLLE AIKNGNDRVA ALLVKEGATL NIENAGTFLC TVVAKGDSDF LKRLLSNGID PNSKDYDHRT PLHVAASEGF YVLAIQLVEA
701: SANVLAKDRW GNTPLDEALG CGNKMLIKLL EDAKNSQISS FPSGSKEPKG SFIGI

Arabidopsis Description

SKORSKOR [Source:UniProtKB/TrEMBL;Acc:A0A178VHK5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.