Factsheet for GSMUA_Achr4P08990_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plasma membrane, mitochondrion

Predictor Summary:

plastid 1
plasma membrane 1
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plasma membrane
Any Predictor:	cytosol, mitochondrion, plasma membrane, plastid
BaCelLo:	plastid
MultiLoc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr1P05260_001
GSMUA_Achr2P09100_001
GSMUA_Achr3P20680_001
GSMUA_Achr4P08990_001
GSMUA_Achr4P09000_001
GSMUA_Achr4P23000_001
GSMUA_Achr4P31540_001
GSMUA_Achr5P04480_001
GSMUA_Achr5P09770_001
GSMUA_Achr5P09840_001
GSMUA_Achr5P29000_001
GSMUA_Achr6P05630_001
GSMUA_Achr6P07280_001
GSMUA_Achr6P15180_001
GSMUA_Achr6P24240_001
GSMUA_Achr6P26910_001
GSMUA_Achr7P05210_001
GSMUA_Achr7P09360_001
GSMUA_Achr7P16100_001
GSMUA_Achr7P26970_001
GSMUA_Achr8P27260_001
GSMUA_Achr9P06470_001
GSMUA_Achr9P13300_001
GSMUA_AchrUn_...
GSMUA_AchrUn_...
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G26650.1	GSMUA_Achr11P...	AT1G07430.1	17898163
AT2G26650.1	GSMUA_Achr5P29000_001	AT1G07430.1	17898163
AT2G26650.1	GSMUA_Achr6P15180_001	AT1G07430.1	17898163
AT2G26650.1	GSMUA_AchrUn_...	AT1G07430.1	17898163
AT2G26650.1	GSMUA_Achr4P23000_001	AT1G30270.1	16814720
AT2G26650.1	GSMUA_Achr4P31540_001	AT1G30270.1	16814720
AT2G26650.1	GSMUA_Achr4P23000_001	AT1G30270.1	17898163
AT2G26650.1	GSMUA_Achr4P31540_001	AT1G30270.1	17898163
AT2G26650.1	GSMUA_Achr10P...	AT2G25090.1	17898163
AT2G26650.1	GSMUA_Achr5P04480_001	AT2G25090.1	17898163
AT2G26650.1	GSMUA_Achr7P16100_001	AT2G25090.1	17898163
AT2G26650.1	GSMUA_Achr9P13300_001	AT2G25090.1	17898163
AT2G26650.1	GSMUA_Achr3P20680_001	AT2G26650.1	12678562
AT2G26650.1	GSMUA_Achr4P08990_001	AT2G26650.1	12678562
AT2G26650.1	GSMUA_Achr4P09000_001	AT2G26650.1	12678562
AT2G26650.1	GSMUA_Achr5P09840_001	AT2G26650.1	12678562
AT2G26650.1	GSMUA_AchrUn_...	AT2G26650.1	12678562
AT2G26650.1	GSMUA_Achr3P20680_001	AT2G26650.1	15299147
AT2G26650.1	GSMUA_Achr4P08990_001	AT2G26650.1	15299147
AT2G26650.1	GSMUA_Achr4P09000_001	AT2G26650.1	15299147
AT2G26650.1	GSMUA_Achr5P09840_001	AT2G26650.1	15299147
AT2G26650.1	GSMUA_AchrUn_...	AT2G26650.1	15299147
AT2G26650.1	GSMUA_Achr3P20680_001	AT2G26650.1	9218788
AT2G26650.1	GSMUA_Achr4P08990_001	AT2G26650.1	9218788
AT2G26650.1	GSMUA_Achr4P09000_001	AT2G26650.1	9218788
AT2G26650.1	GSMUA_Achr5P09840_001	AT2G26650.1	9218788
AT2G26650.1	GSMUA_AchrUn_...	AT2G26650.1	9218788
AT2G26650.1	GSMUA_Achr6P07280_001	AT4G22200.1	12678562
AT2G26650.1	GSMUA_Achr6P24240_001	AT4G22200.1	12678562
AT2G26650.1	GSMUA_Achr6P07280_001	AT4G22200.1	15299147
AT2G26650.1	GSMUA_Achr6P24240_001	AT4G22200.1	15299147
AT2G26650.1	GSMUA_Achr10P...	AT4G30960.1	17898163
AT2G26650.1	GSMUA_Achr7P05210_001	AT4G30960.1	17898163
AT2G26650.1	GSMUA_Achr7P26970_001	AT4G30960.1	17898163
AT2G26650.1	GSMUA_AchrUn_...	AT4G30960.1	17898163
AT2G26650.1	GSMUA_Achr1P05260_001	AT4G32650.1	12678562
AT2G26650.1	GSMUA_Achr5P09770_001	AT4G32650.1	12678562
AT2G26650.1	GSMUA_Achr1P05260_001	AT4G32650.1	15299147
AT2G26650.1	GSMUA_Achr5P09770_001	AT4G32650.1	15299147
AT2G26650.1	GSMUA_Achr10P...	AT5G46240.1	15299147
AT2G26650.1	GSMUA_Achr2P09100_001	AT5G46240.1	15299147
AT2G26650.1	GSMUA_Achr6P05630_001	AT5G46240.1	15299147
AT2G26650.1	GSMUA_Achr6P26910_001	AT5G46240.1	15299147
AT2G26650.1	GSMUA_Achr7P09360_001	AT5G46240.1	15299147
AT2G26650.1	GSMUA_Achr8P27260_001	AT5G46240.1	15299147
AT2G26650.1	GSMUA_Achr9P06470_001	AT5G46240.1	15299147

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P09000_001	Banana	plasma membrane	62.38	91.06
GSMUA_Achr3P20680_001	Banana	cytosol, nucleus, plasma membrane	72.43	73.6
GSMUA_Achr5P09840_001	Banana	plasma membrane	70.34	70.0
GSMUA_AchrUn_...	Banana	plasma membrane	66.91	69.03
VIT_11s0016g04750.t01	Wine grape	plasma membrane	65.44	61.24
Zm00001d044056_P003	Maize	plasma membrane, plastid	66.18	60.88
EES03354	Sorghum	plastid	65.81	60.68
AT2G26650.1	Thale cress	plasma membrane	63.11	60.09
PGSC0003DMT400002746	Potato	plasma membrane	63.36	59.15
TraesCS3D01G219600.1	Wheat	plasma membrane	64.95	59.09
TraesCS3A01G233800.1	Wheat	plasma membrane	64.95	59.09
Solyc12g006850.1.1	Tomato	plasma membrane	63.85	59.0
TraesCS3B01G265500.1	Wheat	plasma membrane	64.71	58.86
HORVU3Hr1G058300.1	Barley	plasma membrane	64.71	58.8
CDY35373	Canola	cytosol, plasma membrane, vacuole	61.4	58.26
Bra032037.1-P	Field mustard	cytosol	61.27	58.14
CDY55714	Canola	cytosol, plasma membrane, vacuole	61.27	58.07
KRH03745	Soybean	plasma membrane	62.25	58.06
Zm00001d011473_P003	Maize	plastid	64.83	57.94
Os01t0648000-01	Rice	plasma membrane	65.69	57.33
KRH56647	Soybean	plasma membrane	62.38	57.0
VIT_04s0008g04990.t01	Wine grape	mitochondrion	61.64	56.01
Solyc09g005220.1.1	Tomato	cytosol	19.36	55.24
PGSC0003DMT400091020	Potato	peroxisome, plasma membrane	40.56	54.17
Solyc08g066990.2.1	Tomato	plasma membrane	57.11	54.06
PGSC0003DMT400074787	Potato	cytosol, nucleus, plasma membrane	56.99	54.01
CDX68851	Canola	plasma membrane	56.25	53.56
KRH61812	Soybean	plasma membrane	56.99	52.96
KRH52490	Soybean	plasma membrane	56.86	52.79
AT4G32500.1	Thale cress	plasma membrane	56.86	52.73
AT2G25600.1	Thale cress	cytosol	57.35	52.7
KRH05105	Soybean	cytosol, plasma membrane, vacuole	55.88	52.66
KRH16013	Soybean	plasma membrane	56.25	52.46
Bra007785.1-P	Field mustard	cytosol	55.64	52.42
CDX75249	Canola	plasma membrane	56.0	52.17
CDY11516	Canola	cytosol	56.0	52.11
Bra011351.1-P	Field mustard	cytosol	55.88	52.05
CDX76746	Canola	cytosol	56.0	51.99
Solyc05g017930.1.1	Tomato	nucleus, plasma membrane	8.7	49.65
GSMUA_Achr10P...	Banana	plasma membrane	39.71	49.32
GSMUA_Achr7P09360_001	Banana	plasma membrane	38.48	48.31
GSMUA_Achr6P05630_001	Banana	cytosol, nucleus, plasma membrane	38.97	46.7
GSMUA_Achr6P26910_001	Banana	endoplasmic reticulum, peroxisome, plasma membrane	39.95	44.72
GSMUA_Achr9P06470_001	Banana	plasma membrane	39.46	44.6
GSMUA_Achr8P27260_001	Banana	plasma membrane	39.22	44.14
GSMUA_Achr2P09100_001	Banana	plasma membrane, vacuole	39.83	43.68
GSMUA_Achr1P05260_001	Banana	plasma membrane	33.21	42.81
GSMUA_Achr6P24240_001	Banana	cytosol	41.54	42.38
GSMUA_Achr5P09770_001	Banana	plasma membrane	33.21	41.5
GSMUA_Achr6P07280_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	39.95	39.56
GSMUA_Achr3P16730_001	Banana	plasma membrane	28.06	31.72
GSMUA_Achr8P22950_001	Banana	cytosol	20.1	30.31
GSMUA_Achr9P15840_001	Banana	cytosol, mitochondrion, plasma membrane, vacuole	29.53	28.52
GSMUA_Achr8P22960_001	Banana	nucleus, peroxisome, plasma membrane	10.29	28.0

Protein Annotations

Gene3D:1.10.287.70	Gene3D:1.25.40.20	Gene3D:2.60.120.10	MapMan:24.3.2.2	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	GO:GO:0003674	GO:GO:0005215	GO:GO:0005216	GO:GO:0005244	GO:GO:0005249
GO:GO:0005267	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0006810	GO:GO:0006811
GO:GO:0006813	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0034765
GO:GO:0055085	GO:GO:0071805	EnsemblPlantsGene:GSMUA_Achr4G08990_001	EnsemblPlants:GSMUA_Achr4P08990_001	EnsemblPlants:GSMUA_Achr4T08990_001	InterPro:IPR000595
InterPro:IPR002110	InterPro:IPR014710	InterPro:IPR020683	InterPro:IPR021789	InterPro:IPR036770	InterPro:Ion_trans_dom
InterPro:KHA_dom	InterPro:K_chnl_volt-dep_EAG/ELK/ERG	UniProt:M0SMB6	PFAM:PF00027	PFAM:PF00520	PFAM:PF11834
PFAM:PF12796	PRINTS:PR01415	PRINTS:PR01463	PFscan:PS50042	PFscan:PS50088	PFscan:PS50297
PFscan:PS51490	PANTHER:PTHR10217	PANTHER:PTHR10217:SF504	InterPro:RmlC-like_jellyroll	SMART:SM00100	SMART:SM00248
SUPFAM:SSF48403	SUPFAM:SSF51206	SUPFAM:SSF81324	TMHMM:TMhelix	UniParc:UPI000294B1CF	InterPro:cNMP-bd-like
InterPro:cNMP-bd_dom	SEG:seg	:	:	:	:

Description

Potassium channel AKT1 [Source:GMGC_GENE;Acc:GSMUA_Achr4G08990_001]

Coordinates

chr4:-:6547783..6551972

Molecular Weight (calculated)

91660.5 Da

IEP (calculated)

8.596

GRAVY (calculated)

-0.099

Length

816 amino acids

Sequence
(BLAST)

001: MAKERKAARL RAPPVTTTGV HDVETELSRE ANLYNLSSGI LPSLGARSTR RVKLRRFIVS PYARRYKAWE TYLIVLVVYT AWASPFEFGF LERSRGALAL
101: VDNVVDAFFA VDIVLTFFVA YVDKTSYLLI DSRKKIAWRY LSTWFVLDLA STVPLEIARR ILPRKLGSYG FFTMLRLWRL RRVSSLFARL EKDRKFNYFW
201: VRCAKLTCVT LFAVHSAGCF FYLVAARYHD PSRTWIGASI PDFHVRSLWV RYVTSLYWSI TTLSTVGYGD LHVQNTWEMA FAIVYMLFNL GLTSYLIGNM
301: TNLVVHGTRR TRNYRDSIQA ATGFAQRNQL PDRLHDQMIS HLSLKFRIDS EGLHQQETLD TLPKAIRSSI SHHLFYPLVA KVYLFRGVSH NMLFQLVSEM
401: KAEYFPPRED VILQNEAPTD LYIVVTGIMD LIDHRSGAEQ VCGVAKTGDV AGEIGVLCCR PQAFTARTRS LCQLLRLNRT TFLSIVQSNF GDGTTIVNNL
501: LQDPVMMRVL REIENMLARG RLDLPLTLCF AVTRGDDLLL HQLLRRGLDP NESDSNGQTA LHIAASKGNE NCVHLLLDYG ADPNSQDSEG SVPLWEAMAG
601: KHGNVVKLLI ENGANLSSGD MGLFASTAAE QNSLELLEDI IRCGGDVTVP ERDGSTALHL AVCQGNAEVV NFLLEQGADM DKPDCHGWTP RNLADQKGHA
701: MIKALFEAKR AQNITWKRSD AEDKLPQLTV RSRISCPCQQ EKRQWKANSA RKLIPLPGSL AELLDLGRNK FGFLPTKVLN EGGAEIDDVK VIRDGDHLVL
801: VSDAWTGEGS SKQDGA

Best Arabidopsis Sequence Match ( AT2G26650.1 )
(BLAST)

001: MRGGALLCGQ VQDEIEQLSR ESSHFSLSTG ILPSLGARSN RRVKLRRFVV SPYDHKYRIW EAFLVVLVVY TAWVSPFEFG FLRKPRPPLS ITDNIVNAFF
101: AIDIIMTFFV GYLDKSTYLI VDDRKQIAFK YLRSWFLLDL VSTIPSEAAM RISSQSYGLF NMLRLWRLRR VGALFARLEK DRNFNYFWVR CAKLVCVTLF
201: AVHCAACFYY LIAARNSNPA KTWIGANVAN FLEESLWMRY VTSMYWSITT LTTVGYGDLH PVNTKEMIFD IFYMLFNLGL TAYLIGNMTN LVVHGTSRTR
301: NFRDTIQAAS NFAHRNHLPP RLQDQMLAHL CLKYRTDSEG LQQQETLDAL PKAIRSSISH FLFYSLMDKV YLFRGVSNDL LFQLVSEMKA EYFPPKEDVI
401: LQNEAPTDFY ILVNGTADLV DVDTGTESIV REVKAGDIIG EIGVLCYRPQ LFTVRTKRLC QLLRMNRTTF LNIIQANVGD GTIIMNNLLQ HLKEMNDPVM
501: TNVLLEIENM LARGKMDLPL NLCFAAIRED DLLLHQLLKR GLDPNESDNN GRTPLHIAAS KGTLNCVLLL LEYHADPNCR DAEGSVPLWE AMVEGHEKVV
601: KVLLEHGSTI DAGDVGHFAC TAAEQGNLKL LKEIVLHGGD VTRPRATGTS ALHTAVCEEN IEMVKYLLEQ GADVNKQDMH GWTPRDLAEQ QGHEDIKALF
701: REKLHERRVH IETSSSVPIL KTGIRFLGRF TSEPNIRPAS REVSFRIRET RARRKTNNFD NSLFGILANQ SVPKNGLATV DEGRTGNPVR VTISCAEKDD
801: IAGKLVLLPG SFKELLELGS NKFGIVATKV MNKDNNAEID DVDVIRDGDH LIFATDS

Arabidopsis Description

AKT1Potassium channel AKT1 [Source:UniProtKB/Swiss-Prot;Acc:Q38998]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.