Factsheet for PGSC0003DMT400074787

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

nucleus 3
plasma membrane 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g066990.2.1	Tomato	plasma membrane	95.7	95.59
PGSC0003DMT400091020	Potato	peroxisome, plasma membrane	57.03	80.36
GSMUA_Achr3P20680_001	Banana	cytosol, nucleus, plasma membrane	56.45	60.52
VIT_04s0008g04990.t01	Wine grape	mitochondrion	62.02	59.47
GSMUA_AchrUn_...	Banana	plasma membrane	53.89	58.66
GSMUA_Achr5P09840_001	Banana	plasma membrane	55.52	58.29
PGSC0003DMT400002746	Potato	plasma membrane	58.88	58.01
CDX68851	Canola	plasma membrane	57.61	57.88
Bra007785.1-P	Field mustard	cytosol	57.84	57.51
CDY11516	Canola	cytosol	58.07	57.01
GSMUA_Achr4P08990_001	Banana	cytosol, mitochondrion, plasma membrane	54.01	56.99
GSMUA_Achr4P09000_001	Banana	plasma membrane	36.93	56.89
CDX76746	Canola	cytosol	57.84	56.66
KRH61812	Soybean	plasma membrane	57.38	56.26
CDX75249	Canola	plasma membrane	57.14	56.16
Bra011351.1-P	Field mustard	cytosol	57.14	56.16
KRH16013	Soybean	plasma membrane	56.91	56.0
AT2G25600.1	Thale cress	cytosol	57.61	55.86
AT4G32500.1	Thale cress	plasma membrane	57.03	55.8
KRH05105	Soybean	cytosol, plasma membrane, vacuole	56.1	55.77
KRH52490	Soybean	plasma membrane	56.33	55.18
Zm00001d044056_P003	Maize	plasma membrane, plastid	56.45	54.79
EES03354	Sorghum	plastid	56.21	54.69
TraesCS3A01G233800.1	Wheat	plasma membrane	56.21	53.96
TraesCS3B01G265500.1	Wheat	plasma membrane	56.1	53.85
TraesCS3D01G219600.1	Wheat	plasma membrane	55.98	53.73
HORVU3Hr1G058300.1	Barley	plasma membrane	55.87	53.56
Zm00001d011473_P003	Maize	plastid	55.75	52.57
Os01t0648000-01	Rice	plasma membrane	56.91	52.41
PGSC0003DMT400054339	Potato	plasma membrane	34.84	43.6
PGSC0003DMT400024968	Potato	cytosol, plasma membrane, vacuole	34.61	43.25
PGSC0003DMT400065964	Potato	cytosol, plastid	31.36	42.79
PGSC0003DMT400037608	Potato	plastid	29.85	41.25
PGSC0003DMT400054318	Potato	nucleus	14.29	39.05
PGSC0003DMT400062100	Potato	plasma membrane	37.86	38.72
PGSC0003DMT400061090	Potato	cytosol	37.05	38.71
PGSC0003DMT400024866	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	10.92	32.53
PGSC0003DMT400034446	Potato	cytosol	29.62	30.8

Protein Annotations

Gene3D:1.10.287.70	Gene3D:1.25.40.20	Gene3D:2.60.120.10	MapMan:24.3.2.2	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	GO:GO:0003674	GO:GO:0005215	GO:GO:0005216	GO:GO:0005244	GO:GO:0005249
GO:GO:0005267	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0006810	GO:GO:0006811
GO:GO:0006813	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0034765
GO:GO:0055085	GO:GO:0071805	InterPro:IPR000595	InterPro:IPR002110	InterPro:IPR014710	InterPro:IPR020683
InterPro:IPR021789	InterPro:IPR036770	InterPro:Ion_trans_dom	InterPro:KHA_dom	InterPro:K_chnl_volt-dep_EAG/ELK/ERG	UniProt:M1CU62
PFAM:PF00027	PFAM:PF00520	PFAM:PF11834	PFAM:PF12796	EnsemblPlantsGene:PGSC0003DMG400029083	PGSC:PGSC0003DMG400029083
EnsemblPlants:PGSC0003DMT400074787	PRINTS:PR01415	PRINTS:PR01463	PFscan:PS50042	PFscan:PS50088	PFscan:PS50297
PFscan:PS51490	PANTHER:PTHR10217	PANTHER:PTHR10217:SF477	InterPro:RmlC-like_jellyroll	SMART:SM00100	SMART:SM00248
SUPFAM:SSF48403	SUPFAM:SSF51206	SUPFAM:SSF81324	TMHMM:TMhelix	UniParc:UPI000295C652	InterPro:cNMP-bd-like
InterPro:cNMP-bd_dom	:	:	:	:	:

Description

Potassium channel NKT1 [Source:PGSC_GENE;Acc:PGSC0003DMG400029083]

Coordinates

chr8:-:39973288..39979045

Molecular Weight (calculated)

96739.1 Da

IEP (calculated)

7.472

GRAVY (calculated)

-0.056

Length

861 amino acids

Sequence
(BLAST)

001: MDRAYSMDDK SSHYSITSAI LPSLGAHTNC KTKLRRYIIS PSNPRYRAWN AYLVLLVFYT AWASPFQFGF LDRPRGVIPI LDNIANSFFA IDIVLTFFVA
101: YLDKSACSMI DDPKRIALRY TKSGFLFDVI STIPSELIRK STPYFLQSYE YFSILRLWRL RRVSAMFARL EKNRKISYFG VRVLKLICVT LFAVHCAGCF
201: YYFLAARKQD TSKTWLSLAI GNHHDRSIWD LYVMCMYWSI TTLTTTGYGD LHAVATEEMI FTMFYMLFDL GLTAYLIGNM TNLVVHGTSK TRKFRDTIQA
301: ASSFAQRNKL PVRLEEQMIA HLRLRHRTDS EGLQQQETLE TLPKAIRSGI SHYLFYPLVD KVYLFHGVSN DLLFQLVSEM KAEYFPPKED VILQNEAPTD
401: LYILVTGAVD LISHKNGMDQ VVGELKMGDV CGEVGVLCCR PQLFNVRTKK VSQLLRLDRS SFFNIVKTNI GDGTIIMNNL LQHLKERRDP MMTAILADIE
501: HMLTQGRMDM PLSLCFAANR GDDLLLRQLL KKGMDPNESD SNGRTVLHIA ASKGSVECIL LLLDFGAHPN RKDSEGNVPL WDAIVGKHEA VVKLLVDNGA
601: TISSGDVGQF ACFAVEQGSL DLLKEIIKYG GDVTLLNSLG TTAIHTAISE ENVEIVKFLL EQGTDIDKAD VHGWTPRALA EYQGHGEIKE LFNLMQPTSK
701: ETNVCPPEAP FAPYLMKYQS DPAIPLFIHE ETARETGSSN GRLRRRASFF QNSLIGFVAA RQRHHEGTYC GNLAGGGGPE YSSTKIANSR IPSRITIRCL
801: EKAHIGRRAV LLPDSINELL DIGAEKFGVS LAKVLTEDGA LIEDIEVIRD GDHLVLATSE N

Best Arabidopsis Sequence Match ( AT2G26650.1 )
(BLAST)

001: MRGGALLCGQ VQDEIEQLSR ESSHFSLSTG ILPSLGARSN RRVKLRRFVV SPYDHKYRIW EAFLVVLVVY TAWVSPFEFG FLRKPRPPLS ITDNIVNAFF
101: AIDIIMTFFV GYLDKSTYLI VDDRKQIAFK YLRSWFLLDL VSTIPSEAAM RISSQSYGLF NMLRLWRLRR VGALFARLEK DRNFNYFWVR CAKLVCVTLF
201: AVHCAACFYY LIAARNSNPA KTWIGANVAN FLEESLWMRY VTSMYWSITT LTTVGYGDLH PVNTKEMIFD IFYMLFNLGL TAYLIGNMTN LVVHGTSRTR
301: NFRDTIQAAS NFAHRNHLPP RLQDQMLAHL CLKYRTDSEG LQQQETLDAL PKAIRSSISH FLFYSLMDKV YLFRGVSNDL LFQLVSEMKA EYFPPKEDVI
401: LQNEAPTDFY ILVNGTADLV DVDTGTESIV REVKAGDIIG EIGVLCYRPQ LFTVRTKRLC QLLRMNRTTF LNIIQANVGD GTIIMNNLLQ HLKEMNDPVM
501: TNVLLEIENM LARGKMDLPL NLCFAAIRED DLLLHQLLKR GLDPNESDNN GRTPLHIAAS KGTLNCVLLL LEYHADPNCR DAEGSVPLWE AMVEGHEKVV
601: KVLLEHGSTI DAGDVGHFAC TAAEQGNLKL LKEIVLHGGD VTRPRATGTS ALHTAVCEEN IEMVKYLLEQ GADVNKQDMH GWTPRDLAEQ QGHEDIKALF
701: REKLHERRVH IETSSSVPIL KTGIRFLGRF TSEPNIRPAS REVSFRIRET RARRKTNNFD NSLFGILANQ SVPKNGLATV DEGRTGNPVR VTISCAEKDD
801: IAGKLVLLPG SFKELLELGS NKFGIVATKV MNKDNNAEID DVDVIRDGDH LIFATDS

Arabidopsis Description

AKT1Potassium channel AKT1 [Source:UniProtKB/Swiss-Prot;Acc:Q38998]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.