Factsheet for VIT_04s0008g04990.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
plasma membrane 1
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_11s0016g04750.t01	Wine grape	plasma membrane	68.15	70.18
GSMUA_Achr3P20680_001	Banana	cytosol, nucleus, plasma membrane	59.91	67.0
GSMUA_AchrUn_...	Banana	plasma membrane	56.79	64.48
GSMUA_Achr5P09840_001	Banana	plasma membrane	58.24	63.78
GSMUA_Achr4P09000_001	Banana	plasma membrane	39.31	63.15
PGSC0003DMT400091020	Potato	peroxisome, plasma membrane	42.2	62.03
PGSC0003DMT400074787	Potato	cytosol, nucleus, plasma membrane	59.47	62.02
EES03354	Sorghum	plastid	61.02	61.92
Zm00001d044056_P003	Maize	plasma membrane, plastid	61.02	61.78
GSMUA_Achr4P08990_001	Banana	cytosol, mitochondrion, plasma membrane	56.01	61.64
Solyc08g066990.2.1	Tomato	plasma membrane	59.13	61.6
TraesCS3D01G219600.1	Wheat	plasma membrane	61.36	61.43
TraesCS3A01G233800.1	Wheat	plasma membrane	61.25	61.32
CDX68851	Canola	plasma membrane	58.46	61.26
TraesCS3B01G265500.1	Wheat	plasma membrane	61.14	61.2
Solyc09g005220.1.1	Tomato	cytosol	19.49	61.19
HORVU3Hr1G058300.1	Barley	plasma membrane	60.91	60.91
KRH05105	Soybean	cytosol, plasma membrane, vacuole	58.24	60.39
Bra007785.1-P	Field mustard	cytosol	58.13	60.28
AT2G25600.1	Thale cress	cytosol	59.58	60.25
KRH16013	Soybean	plasma membrane	58.46	60.0
CDY11516	Canola	cytosol	58.57	59.98
KRH61812	Soybean	plasma membrane	58.57	59.91
CDX76746	Canola	cytosol	58.46	59.73
KRH52490	Soybean	plasma membrane	58.35	59.61
CDX75249	Canola	plasma membrane	58.13	59.59
Bra011351.1-P	Field mustard	cytosol	58.13	59.59
Zm00001d011473_P003	Maize	plastid	59.91	58.93
AT4G32500.1	Thale cress	plasma membrane	57.46	58.64
Os01t0648000-01	Rice	plasma membrane	61.02	58.61
VIT_10s0003g03270.t01	Wine grape	plasma membrane	42.43	48.17
VIT_04s0008g04510.t01	Wine grape	cytosol, mitochondrion, peroxisome, plasma membrane	30.96	44.06
VIT_12s0034g02240.t01	Wine grape	cytosol, mitochondrion, plasma membrane	39.2	41.95
VIT_14s0006g00230.t01	Wine grape	extracellular	5.35	34.29
VIT_17s0000g01980.t01	Wine grape	golgi, plasma membrane	25.72	31.6
VIT_14s0006g00100.t01	Wine grape	cytosol, plasma membrane, plastid	27.84	30.45
VIT_18s0089g01300.t01	Wine grape	plasma membrane	24.72	30.41
VIT_11s0016g05810.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	27.17	29.19

Protein Annotations

Gene3D:1.10.287.70	Gene3D:1.25.40.20	EntrezGene:100242278	wikigene:100242278	Gene3D:2.60.120.10	MapMan:24.3.2.2
EMBL:AM431698	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	ProteinID:CAN78157	ProteinID:CAN78157.1
ProteinID:CBI20997	ProteinID:CBI20997.3	ProteinID:CBW30481	ProteinID:CBW30481.1	ProteinID:CBW30482	ProteinID:CBW30482.1
UniProt:D7SUP8	EMBL:FN595231	EMBL:FR669115	EMBL:FR669116	GO:GO:0003674	GO:GO:0005215
GO:GO:0005216	GO:GO:0005244	GO:GO:0005249	GO:GO:0005267	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006811
GO:GO:0006813	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0034765
GO:GO:0042391	GO:GO:0055085	GO:GO:0071805	InterPro:IPR000595	InterPro:IPR002110	InterPro:IPR014710
InterPro:IPR020683	InterPro:IPR021789	InterPro:IPR036770	InterPro:Ion_trans_dom	EntrezGene:K1.2	wikigene:K1.2
InterPro:KHA_dom	InterPro:K_chnl_volt-dep_EAG/ELK/ERG	PFAM:PF00027	PFAM:PF00520	PFAM:PF11834	PFAM:PF12796
PRINTS:PR01415	PRINTS:PR01463	PFscan:PS50042	PFscan:PS50088	PFscan:PS50297	PFscan:PS51490
PANTHER:PTHR10217	PANTHER:PTHR10217:SF477	InterPro:RmlC-like_jellyroll	SMART:SM00100	SMART:SM00248	SUPFAM:SSF48403
SUPFAM:SSF51206	SUPFAM:SSF81324	TMHMM:TMhelix	UniParc:UPI00015C9150	ArrayExpress:VIT_04s0008g04990	EnsemblPlantsGene:VIT_04s0008g04990
EnsemblPlants:VIT_04s0008g04990.t01	unigene:Vvi.26459	InterPro:cNMP-bd-like	InterPro:cNMP-bd_dom	SEG:seg	:

Description

No Description!

Coordinates

chr4:-:4478744..4485166

Molecular Weight (calculated)

101540.0 Da

IEP (calculated)

7.909

GRAVY (calculated)

-0.200

Length

898 amino acids

Sequence
(BLAST)

001: MVHRRKRGGL LRGGWCGGGG EEEAIEQLSR DDASHFSVTS AILPSLGARS NRRINLRRFI VSPFDARYRL WETYLVFLVF YTAWVSPFEF GFLEEPKGPL
101: SIADNVVNGF FAIDIILTFF VAYLDRSTYL LVDNHKLIAW RYTKTWLAFD VISTIPSELA RKILPKPLKE YGYFNMLRLW RLRRVSSMFA RLEKDRNFNY
201: FWVRCAKLIC VTLFAVHCAG CFYYLLGSQH GDPKKTWLGL VMGDLNTHSL WQRYVTSMYW SITTLTTTGY GDLHAVNTRE MVFDIFYMLF NLGLTSYLIG
301: NMTNLVVHGT SRTRKFRDSI QAASSFALRN QLPVRLQDQM LAHLSLRHRT NSEGLQQQET LEVLPKAIRS SISHYLFYSL VDKVYLFRGV SNDLLFQLVS
401: EMKPEYFPPK EDIILQNEAP TDLYVLVTGV VELIERRNAI EQVVGEIRTG DVCGEIGVLC YRPQLFTART KRLCQLLRLN RTALLNLVQA NVGDGAIIIN
501: NLLQHLKEHK NPVMEGVLAD IESMLAQGRM ELPLSLCFAV LRGDDLLLHQ LLKRGLDPNE LDSNGRTPLH IAASKGREQC AHLLLEYGAN PNGKDSEGIV
601: PLWDAILERD ESMIKLLMDN GAKIPLSNVG QYACTAVERN DLDLLKDLVR FGGDVTHPSS SGTTALHAAT SEANIEIVKF LLDQGADVDK LDNDGWTPRT
701: LADQQGHEEI KVLFQTKRET KKLTPVPATK KPGVPFLGKF KSDSYLQPFQ HDRESTGLEV SWIDDNRPRR RVNNFNNSLF GIMSSVNTRE RKGFIRSAAS
801: FATSPRQRDF PARVTLSCPE KGEVAGKLVP LPQSLQELLD IGAKKFKFSP TKVVTKEGAE VEDIELIRDG DHLILVSEDG DENSKQVEAG TNLDSPPH

Best Arabidopsis Sequence Match ( AT2G26650.1 )
(BLAST)

001: MRGGALLCGQ VQDEIEQLSR ESSHFSLSTG ILPSLGARSN RRVKLRRFVV SPYDHKYRIW EAFLVVLVVY TAWVSPFEFG FLRKPRPPLS ITDNIVNAFF
101: AIDIIMTFFV GYLDKSTYLI VDDRKQIAFK YLRSWFLLDL VSTIPSEAAM RISSQSYGLF NMLRLWRLRR VGALFARLEK DRNFNYFWVR CAKLVCVTLF
201: AVHCAACFYY LIAARNSNPA KTWIGANVAN FLEESLWMRY VTSMYWSITT LTTVGYGDLH PVNTKEMIFD IFYMLFNLGL TAYLIGNMTN LVVHGTSRTR
301: NFRDTIQAAS NFAHRNHLPP RLQDQMLAHL CLKYRTDSEG LQQQETLDAL PKAIRSSISH FLFYSLMDKV YLFRGVSNDL LFQLVSEMKA EYFPPKEDVI
401: LQNEAPTDFY ILVNGTADLV DVDTGTESIV REVKAGDIIG EIGVLCYRPQ LFTVRTKRLC QLLRMNRTTF LNIIQANVGD GTIIMNNLLQ HLKEMNDPVM
501: TNVLLEIENM LARGKMDLPL NLCFAAIRED DLLLHQLLKR GLDPNESDNN GRTPLHIAAS KGTLNCVLLL LEYHADPNCR DAEGSVPLWE AMVEGHEKVV
601: KVLLEHGSTI DAGDVGHFAC TAAEQGNLKL LKEIVLHGGD VTRPRATGTS ALHTAVCEEN IEMVKYLLEQ GADVNKQDMH GWTPRDLAEQ QGHEDIKALF
701: REKLHERRVH IETSSSVPIL KTGIRFLGRF TSEPNIRPAS REVSFRIRET RARRKTNNFD NSLFGILANQ SVPKNGLATV DEGRTGNPVR VTISCAEKDD
801: IAGKLVLLPG SFKELLELGS NKFGIVATKV MNKDNNAEID DVDVIRDGDH LIFATDS

Arabidopsis Description

AKT1Potassium channel AKT1 [Source:UniProtKB/Swiss-Prot;Acc:Q38998]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.