Factsheet for HORVU3Hr1G058300.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

mitochondrion 2
plasma membrane 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plasma membrane
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G065250.2
HORVU2Hr1G060350.5
HORVU3Hr1G028670.16
HORVU3Hr1G058300.1
HORVU3Hr1G068040.1
HORVU3Hr1G072850.15
HORVU3Hr1G085930.3
HORVU4Hr1G021090.1
HORVU4Hr1G060370.1
HORVU5Hr1G065350.1
HORVU5Hr1G065370.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G26650.1	HORVU3Hr1G085930.3	AT1G07430.1	17898163
AT2G26650.1	HORVU4Hr1G060370.1	AT1G07430.1	17898163
AT2G26650.1	HORVU2Hr1G060350.5	AT1G30270.1	16814720
AT2G26650.1	HORVU2Hr1G060350.5	AT1G30270.1	17898163
AT2G26650.1	HORVU5Hr1G065370.2	AT2G25090.1	17898163
AT2G26650.1	HORVU3Hr1G058300.1	AT2G26650.1	12678562
AT2G26650.1	HORVU3Hr1G058300.1	AT2G26650.1	15299147
AT2G26650.1	HORVU3Hr1G058300.1	AT2G26650.1	9218788
AT2G26650.1	HORVU1Hr1G065250.2	AT4G22200.1	12678562
AT2G26650.1	HORVU1Hr1G065250.2	AT4G22200.1	15299147
AT2G26650.1	HORVU4Hr1G021090.1	AT4G30960.1	17898163
AT2G26650.1	HORVU5Hr1G065350.1	AT4G30960.1	17898163
AT2G26650.1	HORVU3Hr1G068040.1	AT4G32650.1	12678562
AT2G26650.1	HORVU3Hr1G068040.1	AT4G32650.1	15299147
AT2G26650.1	HORVU3Hr1G028670.16	AT5G46240.1	15299147
AT2G26650.1	HORVU3Hr1G072850.15	AT5G46240.1	15299147

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G233800.1	Wheat	plasma membrane	97.22	97.32
TraesCS3B01G265500.1	Wheat	plasma membrane	96.99	97.1
TraesCS3D01G219600.1	Wheat	plasma membrane	96.88	96.99
EES03354	Sorghum	plastid	79.51	80.68
Zm00001d044056_P003	Maize	plasma membrane, plastid	78.17	79.14
Os01t0648000-01	Rice	plasma membrane	78.51	75.4
Zm00001d011473_P003	Maize	plastid	76.5	75.25
GSMUA_Achr3P20680_001	Banana	cytosol, nucleus, plasma membrane	62.47	69.86
GSMUA_AchrUn_...	Banana	plasma membrane	60.36	68.52
GSMUA_Achr5P09840_001	Banana	plasma membrane	61.47	67.32
GSMUA_Achr4P09000_001	Banana	plasma membrane	41.31	66.37
VIT_11s0016g04750.t01	Wine grape	plasma membrane	63.03	64.91
GSMUA_Achr4P08990_001	Banana	cytosol, mitochondrion, plasma membrane	58.8	64.71
PGSC0003DMT400002746	Potato	plasma membrane	62.14	63.84
Solyc12g006850.1.1	Tomato	plasma membrane	62.69	63.76
AT2G26650.1	Thale cress	plasma membrane	60.47	63.36
KRH03745	Soybean	plasma membrane	60.58	62.17
KRH56647	Soybean	plasma membrane	61.25	61.59
CDY35373	Canola	cytosol, plasma membrane, vacuole	58.57	61.16
Bra032037.1-P	Field mustard	cytosol	58.46	61.05
VIT_04s0008g04990.t01	Wine grape	mitochondrion	60.91	60.91
CDY55714	Canola	cytosol, plasma membrane, vacuole	58.35	60.86
HORVU2Hr1G083820.1	Barley	cytosol	48.22	59.89
CDX68851	Canola	plasma membrane	53.9	56.48
PGSC0003DMT400091020	Potato	peroxisome, plasma membrane	38.42	56.46
KRH61812	Soybean	plasma membrane	54.9	56.15
KRH52490	Soybean	plasma membrane	54.9	56.09
PGSC0003DMT400074787	Potato	cytosol, nucleus, plasma membrane	53.56	55.87
Solyc08g066990.2.1	Tomato	plasma membrane	53.56	55.8
KRH05105	Soybean	cytosol, plasma membrane, vacuole	53.79	55.77
AT2G25600.1	Thale cress	cytosol	55.01	55.63
Bra007785.1-P	Field mustard	cytosol	53.56	55.54
CDX76746	Canola	cytosol	54.12	55.29
KRH16013	Soybean	plasma membrane	53.79	55.2
CDY11516	Canola	cytosol	53.9	55.19
Bra011351.1-P	Field mustard	cytosol	53.45	54.79
CDX75249	Canola	plasma membrane	53.45	54.79
AT4G32500.1	Thale cress	plasma membrane	53.12	54.2
Solyc05g017930.1.1	Tomato	nucleus, plasma membrane	8.46	53.15
Solyc09g005220.1.1	Tomato	cytosol	16.7	52.45
HORVU3Hr1G072850.15	Barley	plastid	29.84	52.34
HORVU3Hr1G068040.1	Barley	plasma membrane	22.49	47.2
HORVU3Hr1G028670.16	Barley	plasma membrane	34.86	44.15
HORVU1Hr1G065250.2	Barley	plastid	38.75	39.19
HORVU7Hr1G040990.20	Barley	endoplasmic reticulum, plasma membrane	28.06	31.66
HORVU7Hr1G040880.7	Barley	cytosol, plasma membrane	26.84	31.14
HORVU2Hr1G077680.12	Barley	cytosol	25.61	29.99
HORVU7Hr1G040970.5	Barley	cytosol	28.4	26.73

Protein Annotations

Gene3D:1.10.287.70	Gene3D:1.25.40.20	Gene3D:2.60.120.10	MapMan:24.3.2.2	EMBL:AK365382	InterPro:Ankyrin_rpt
InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	UniProt:F2DNB4	GO:GO:0003674	GO:GO:0005215	GO:GO:0005216
GO:GO:0005244	GO:GO:0005249	GO:GO:0005267	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0006810	GO:GO:0006811	GO:GO:0006813	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0034765	GO:GO:0055085	GO:GO:0071805	EnsemblPlantsGene:HORVU3Hr1G058300	EnsemblPlants:HORVU3Hr1G058300.1
InterPro:IPR000595	InterPro:IPR002110	InterPro:IPR014710	InterPro:IPR020683	InterPro:IPR021789	InterPro:IPR036770
InterPro:Ion_trans_dom	InterPro:KHA_dom	InterPro:K_chnl_volt-dep_EAG/ELK/ERG	PFAM:PF00027	PFAM:PF00520	PFAM:PF11834
PFAM:PF12796	PRINTS:PR01415	PRINTS:PR01463	PFscan:PS50042	PFscan:PS50088	PFscan:PS50297
PFscan:PS51490	PANTHER:PTHR10217	PANTHER:PTHR10217:SF504	InterPro:RmlC-like_jellyroll	SMART:SM00100	SMART:SM00248
SUPFAM:SSF48403	SUPFAM:SSF51206	SUPFAM:SSF81324	TMHMM:TMhelix	UniParc:UPI0000E2BB7D	InterPro:cNMP-bd-like
InterPro:cNMP-bd_dom	SEG:seg	:	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DNB4]

Coordinates

chrchr3H:+:439321823..439329111

Molecular Weight (calculated)

100929.0 Da

IEP (calculated)

7.795

GRAVY (calculated)

-0.154

Length

898 amino acids

Sequence
(BLAST)

001: MSSRSGAARM RACGPWGEAS GSGAVGDAHA LEREMSRDGS HYSLSSGILP SLGARSNRRV KLRPFIISPY DRRYRLWETF LIVLVVYSAW ISPFEFGFIR
101: IPTGGLAATD NAVNAIFAID IILTFFVAYL DRLTYLLEDD PKRIAWRYAT SWLVLDVAST IPSEIARRML PSKLRSYGFF NMLRLWRLRR VSSLFARLEK
201: DRHFNYFWVR CAKLICVTLF AVHCAACFYY LLADRYPNPQ ETWIGNTMPD FHSKGLWIRY VTSVYWSITT LTTVGYGDYH AENIREMIFN IFYMFFNLGL
301: TAYLIGNMTN LVVHGTSRTR KYRDTIQAAT SFALRNQLPP RLQDQMISHL SLKFRTDSEG LQQQETLDAL PKAIRSSISQ YLFLNLVQNI YLFQGVSNDL
401: IFQLVSEMKA EYFPPREDVI LQNEAPTDFY ILVSGSVELV EVPNGAEHGA EQVVGVAKSG DVIGEIGVLC YRPQLFTVRT RSLCQLLRMN RTAFLSIVQS
501: NVGDGTIIMN NLIQLLKEQK DGVMVGVLKE IESMLARGRL DLPITLGFAV TRGDDHLLHQ LLKRNLDPNE SDQDGRTALH IAASKGNEQC VKLLLDYGAD
601: PNARDSEGKV PLWEAVYAKH DTVVQLLIKG GAELSAGDTS LYACTAVEQN DIELLKQILK HVIDVNRPSK DGNIPLHRAV CDGNVEMVEL LLRHGADIDK
701: QDSNGWTPRA LAEQQGHEEI QNLFRSVVAP RKYTSNGRVT PMLLGRFSSD PSMQKVIRED AEQQPSKVLP QRRKVSFHNS LFGVISSSHP RRETDHLLSR
801: GLAATGGPSY PQAHHRPLIR VTIGCPEKGN TAGKLVILPG SMKELLQLGA KKFDMMPTKV LTIEGAEVDE VELIRDGDHL VLASDDWVPD DTQIRGEN

Best Arabidopsis Sequence Match ( AT2G26650.1 )
(BLAST)

001: MRGGALLCGQ VQDEIEQLSR ESSHFSLSTG ILPSLGARSN RRVKLRRFVV SPYDHKYRIW EAFLVVLVVY TAWVSPFEFG FLRKPRPPLS ITDNIVNAFF
101: AIDIIMTFFV GYLDKSTYLI VDDRKQIAFK YLRSWFLLDL VSTIPSEAAM RISSQSYGLF NMLRLWRLRR VGALFARLEK DRNFNYFWVR CAKLVCVTLF
201: AVHCAACFYY LIAARNSNPA KTWIGANVAN FLEESLWMRY VTSMYWSITT LTTVGYGDLH PVNTKEMIFD IFYMLFNLGL TAYLIGNMTN LVVHGTSRTR
301: NFRDTIQAAS NFAHRNHLPP RLQDQMLAHL CLKYRTDSEG LQQQETLDAL PKAIRSSISH FLFYSLMDKV YLFRGVSNDL LFQLVSEMKA EYFPPKEDVI
401: LQNEAPTDFY ILVNGTADLV DVDTGTESIV REVKAGDIIG EIGVLCYRPQ LFTVRTKRLC QLLRMNRTTF LNIIQANVGD GTIIMNNLLQ HLKEMNDPVM
501: TNVLLEIENM LARGKMDLPL NLCFAAIRED DLLLHQLLKR GLDPNESDNN GRTPLHIAAS KGTLNCVLLL LEYHADPNCR DAEGSVPLWE AMVEGHEKVV
601: KVLLEHGSTI DAGDVGHFAC TAAEQGNLKL LKEIVLHGGD VTRPRATGTS ALHTAVCEEN IEMVKYLLEQ GADVNKQDMH GWTPRDLAEQ QGHEDIKALF
701: REKLHERRVH IETSSSVPIL KTGIRFLGRF TSEPNIRPAS REVSFRIRET RARRKTNNFD NSLFGILANQ SVPKNGLATV DEGRTGNPVR VTISCAEKDD
801: IAGKLVLLPG SFKELLELGS NKFGIVATKV MNKDNNAEID DVDVIRDGDH LIFATDS

Arabidopsis Description

AKT1Potassium channel AKT1 [Source:UniProtKB/Swiss-Prot;Acc:Q38998]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.