Factsheet for HORVU3Hr1G072850.15

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
mitochondrion 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plasma membrane, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
TargetP:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G065250.2
HORVU2Hr1G105240.3
HORVU2Hr1G105300.1
HORVU2Hr1G105340.1
HORVU2Hr1G105360.5
HORVU3Hr1G028670.16
HORVU3Hr1G058300.1
HORVU3Hr1G072850.15
HORVU5Hr1G019740.1
HORVU6Hr1G066740.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G46240.1	HORVU3Hr1G058300.1	AT2G26650.1	15299147
AT5G46240.1	HORVU1Hr1G065250.2	AT4G22200.1	12034902
AT5G46240.1	HORVU1Hr1G065250.2	AT4G22200.1	15299147
AT5G46240.1	HORVU1Hr1G065250.2	AT4G22200.1	17085433
AT5G46240.1	HORVU2Hr1G105240.3	AT5G41160.1	15299147
AT5G46240.1	HORVU2Hr1G105300.1	AT5G41160.1	15299147
AT5G46240.1	HORVU2Hr1G105340.1	AT5G41160.1	15299147
AT5G46240.1	HORVU2Hr1G105360.5	AT5G41160.1	15299147
AT5G46240.1	HORVU5Hr1G019740.1	AT5G41160.1	15299147
AT5G46240.1	HORVU6Hr1G066740.2	AT5G41160.1	15299147
AT5G46240.1	HORVU3Hr1G028670.16	AT5G46240.1	11042178
AT5G46240.1	HORVU3Hr1G072850.15	AT5G46240.1	11042178
AT5G46240.1	HORVU3Hr1G028670.16	AT5G46240.1	15299147
AT5G46240.1	HORVU3Hr1G072850.15	AT5G46240.1	15299147
AT5G46240.1	HORVU3Hr1G028670.16	AT5G46240.1	17085433
AT5G46240.1	HORVU3Hr1G072850.15	AT5G46240.1	17085433

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G294000.1	Wheat	mitochondrion, plasma membrane	85.94	87.65
TraesCS3A01G294200.1	Wheat	mitochondrion, plasma membrane	85.55	87.6
TraesCS3B01G328800.1	Wheat	plasma membrane	86.33	87.52
Os01t0756700-01	Rice	plasma membrane	74.61	76.1
EES01496	Sorghum	mitochondrion, plasma membrane	75.98	73.4
CDY03233	Canola	plasma membrane	58.79	45.88
Bra017567.1-P	Field mustard	plasma membrane	58.79	45.81
CDY35154	Canola	plasma membrane	58.79	45.81
CDY33464	Canola	cytosol, plasma membrane, plastid	58.59	45.05
Bra025028.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	58.4	44.89
CDY62359	Canola	cytosol, plasma membrane, plastid	58.01	44.59
AT5G46240.1	Thale cress	plasma membrane	58.01	43.87
HORVU3Hr1G068040.1	Barley	plasma membrane	36.13	43.22
CDX99479	Canola	plasma membrane	57.81	43.21
CDX78839	Canola	plasma membrane	57.62	43.13
Bra013296.1-P	Field mustard	plasma membrane	57.62	42.94
AT4G18290.2	Thale cress	mitochondrion, plasma membrane	57.03	41.24
Solyc08g016500.2.1	Tomato	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	54.88	41.14
Solyc02g070530.2.1	Tomato	nucleus	55.27	41.13
PGSC0003DMT400054339	Potato	plasma membrane	54.69	40.7
KRH44805	Soybean	plasma membrane	57.81	40.66
HORVU3Hr1G028670.16	Barley	plasma membrane	55.66	40.2
PGSC0003DMT400024968	Potato	cytosol, plasma membrane, vacuole	53.91	40.06
KRH21063	Soybean	plasma membrane	58.4	38.48
Solyc03g058900.1.1	Tomato	cytosol	14.65	38.46
VIT_10s0003g03270.t01	Wine grape	plasma membrane	59.18	38.31
CDX76529	Canola	plasma membrane	53.12	38.2
Bra021012.1-P	Field mustard	plasma membrane	52.93	38.06
KRH11194	Soybean	plasma membrane	57.62	37.97
Zm00001d012717_P002	Maize	plasma membrane	75.0	37.25
KRH58233	Soybean	cytosol, extracellular, plasma membrane	16.02	36.94
HORVU2Hr1G083820.1	Barley	cytosol	47.07	33.33
CDY34066	Canola	endoplasmic reticulum, plasma membrane	37.7	31.9
PGSC0003DMT400054318	Potato	nucleus	18.95	30.79
HORVU3Hr1G058300.1	Barley	plasma membrane	52.34	29.84
HORVU1Hr1G065250.2	Barley	plastid	44.73	25.79
PGSC0003DMT400024866	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	13.48	23.88
HORVU7Hr1G040990.20	Barley	endoplasmic reticulum, plasma membrane	32.42	20.85
HORVU7Hr1G040880.7	Barley	cytosol, plasma membrane	30.86	20.41
HORVU2Hr1G077680.12	Barley	cytosol	29.3	19.56
HORVU7Hr1G040970.5	Barley	cytosol	33.2	17.82

Protein Annotations

Gene3D:1.10.287.70	Gene3D:2.60.120.10	MapMan:24.3.2.2	UniProt:A0A287LM21	GO:GO:0003674	GO:GO:0005215
GO:GO:0005216	GO:GO:0005249	GO:GO:0005575	GO:GO:0006810	GO:GO:0006811	GO:GO:0006813
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0034220	GO:GO:0055085
GO:GO:0071805	EnsemblPlantsGene:HORVU3Hr1G072850	EnsemblPlants:HORVU3Hr1G072850.15	InterPro:IPR000595	InterPro:IPR014710	InterPro:Ion_trans_dom
InterPro:K_chnl_volt-dep_EAG/ELK/ERG	PFAM:PF00027	PFAM:PF00520	PRINTS:PR01463	PFscan:PS50042	PANTHER:PTHR10217
PANTHER:PTHR10217:SF619	InterPro:RmlC-like_jellyroll	SMART:SM00100	SUPFAM:SSF51206	SUPFAM:SSF81324	TMHMM:TMhelix
UniParc:UPI000B473FD2	InterPro:cNMP-bd-like	InterPro:cNMP-bd_dom	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr3H:-:549225340..549227973

Molecular Weight (calculated)

59433.6 Da

IEP (calculated)

9.732

GRAVY (calculated)

-0.017

Length

512 amino acids

Sequence
(BLAST)

001: GTFFLRSHGV TGDTVLPMLR RRQERRLQRP RRSPPVARRH RRPADRRQVP RLALRPALQV RTVWETFLIL LVVYSAWICP LEFAFLRYLP RAPFVVDDVV
101: NGFFAVDILL TFFVPFVDKK SYLVVDDPKK IALRYLSTWF IFDVCSTVPF RSITHLFTRH EHNLGLKFLN VLRLWRLRRV SSLFARLEKD IRFNYAVIRC
201: TKLISVTLFA VHCAGCINYL IADRYPDPAR TWIGAAHPDF REDGLWVRYV TCIYWSITTM TTTGYGDLHA QNSREMLFGI SYMLFNLWLT AYLIGNMTNL
301: VVHSTSRTRD FRDMVQAATE FAARNQLPRQ IEEQMLNHIC LRFKAEGLKQ QDTLDILPKA MRSSISLYLF FPVVQGAYLF RGVSSSFIQQ LVTEMVAEYF
401: APKEDIILQN EYPSDLHLLV TGEVDIVAFL DGTEQVYGKA TEGGLLGEIG VLCNKPQPFT FRTTKLSQVL RISRPKLMDI IQENAEDGEI IRINLEQKLR
501: NLSMELWNDT PK

Best Arabidopsis Sequence Match ( AT5G46240.1 )
(BLAST)

001: MSISWTRNFF ERFCVEEYNI DTIKQSSFLS ADLLPSLGAR INQSTKLRKH IISPFNPRYR AWEMWLVLLV IYSAWICPFQ FAFITYKKDA IFIIDNIVNG
101: FFAIDIILTF FVAYLDSHSY LLVDSPKKIA IRYLSTWFAF DVCSTAPFQP LSLLFNYNGS ELGFRILSML RLWRLRRVSS LFARLEKDIR FNYFWIRCTK
201: LISVTLFAIH CAGCFNYLIA DRYPNPRKTW IGAVYPNFKE ASLWNRYVTA LYWSITTLTT TGYGDFHAEN PREMLFDIFF MMFNLGLTAY LIGNMTNLVV
301: HWTSRTRTFR DSVRAASEFA SRNQLPHDIQ DQMLSHICLK FKTEGLKQQE TLNNLPKAIR SSIANYLFFP IVHNIYLFQG VSRNFLFQLV SDIDAEYFPP
401: KEDIILQNEA PTDLYILVSG AVDFTVYVDG HDQFQGKAVI GETFGEVGVL YYRPQPFTVR TTELSQILRI SRTSLMSAMH AHADDGRVIM NNLFMKLRGQ
501: QSIAIDDSNT SGHENRDFKS MGWEEWRDSR KDGYGLDVTN PTSDTALMDA IHKEDTEMVK KILKEQKIER AKVERSSSET AGRSYANDSS KKDPYCSSSN
601: QIIKPCKREE KRVTIHMMSE SKNGKLILLP SSIEELLRLA SEKFGGCNFT KITNADNAEI DDLDVIWDGD HLYFSSN

Arabidopsis Description

KAT1At5g46240 [Source:UniProtKB/TrEMBL;Acc:Q67YG3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.