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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • peroxisome 2
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:peroxisome
MultiLoc:peroxisome
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU3Hr1G028670.16
HORVU3Hr1G072850.15

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G41160.1 HORVU3Hr1G028670.16 AT5G46240.1 15299147
AT5G41160.1 HORVU3Hr1G072850.15 AT5G46240.1 15299147
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU2Hr1G105240.3 Barley peroxisome 94.66 94.66
HORVU2Hr1G105340.1 Barley golgi, peroxisome, plasma membrane 88.35 93.09
TraesCS2A01G452400.1 Wheat plasma membrane 83.98 90.58
TraesCS2D01G452200.1 Wheat plasma membrane 83.74 90.55
TraesCS2B01G473900.1 Wheat plasma membrane 83.5 90.29
KXG27004 Sorghum golgi, peroxisome, vacuole 67.96 71.07
KRH40250 Soybean endoplasmic reticulum, plasma membrane, vacuole 46.12 52.49
CDY12545 Canola plasma membrane 37.38 51.68
KRH00977 Soybean endoplasmic reticulum, plasma membrane, vacuole 44.9 50.68
CDY36342 Canola endoplasmic reticulum, plasma membrane, vacuole 36.65 50.5
Solyc01g088550.2.1 Tomato plasma membrane 43.45 49.18
PGSC0003DMT400004320 Potato plasma membrane 43.45 48.51
HORVU2Hr1G105300.1 Barley peroxisome 43.45 47.86
AT1G44750.1 Thale cress plasma membrane 43.2 46.97
HORVU6Hr1G066740.2 Barley golgi, mitochondrion 45.87 45.22
VIT_19s0014g00150.t01 Wine grape plasma membrane 41.5 45.12
VIT_15s0021g00650.t01 Wine grape plastid 40.78 44.21
KRH13483 Soybean plasma membrane 32.52 43.65
CDY14989 Canola plasma membrane 42.96 42.65
Bra036955.1-P Field mustard plasma membrane 42.96 42.65
Bra037874.1-P Field mustard plasma membrane 34.47 42.52
CDX71327 Canola plasma membrane 42.72 42.31
Zm00001d026042_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 68.93 42.2
AT4G08700.1 Thale cress plasma membrane 35.44 40.44
KRH21843 Soybean mitochondrion 40.78 40.0
AT5G41160.1 Thale cress plasma membrane 33.98 38.46
CDY54350 Canola plasma membrane 29.61 36.75
CDX75141 Canola plasma membrane 28.64 35.54
HORVU4Hr1G078220.1 Barley endoplasmic reticulum, plasma membrane 20.39 30.88
HORVU5Hr1G069880.1 Barley plasma membrane 19.66 30.0
HORVU4Hr1G078210.1 Barley plastid 27.18 28.72
HORVU5Hr1G019740.1 Barley cytosol, plastid 23.06 28.53
HORVU2Hr1G127610.1 Barley cytosol, plasma membrane 7.77 26.89
HORVU5Hr1G088530.5 Barley cytosol, endoplasmic reticulum, peroxisome 25.73 25.67
HORVU3Hr1G062690.1 Barley plastid 24.76 25.5
HORVU5Hr1G069920.5 Barley cytosol 16.75 24.82
HORVU1Hr1G085140.1 Barley endoplasmic reticulum 22.57 24.6
HORVU5Hr1G104050.3 Barley cytosol, peroxisome, plasma membrane 24.76 24.46
HORVU5Hr1G069960.1 Barley cytosol, plasma membrane 25.49 24.36
HORVU1Hr1G085230.1 Barley mitochondrion 23.54 23.83
HORVU1Hr1G085120.1 Barley plastid 23.06 23.75
HORVU5Hr1G069910.2 Barley cytosol, peroxisome, plasma membrane 20.15 22.62
HORVU1Hr1G085150.1 Barley plastid 22.82 22.17
HORVU2Hr1G127530.7 Barley endoplasmic reticulum, plasma membrane 18.69 22.13
HORVU7Hr1G086680.1 Barley mitochondrion 8.01 17.19
Protein Annotations
EnsemblPlants:HORVU2Hr1G105360.5EnsemblPlantsGene:HORVU2Hr1G105360GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0016021InterPro:PUP_plantncoils:CoilPANTHER:PTHR31376
PANTHER:PTHR31376:SF33PFAM:PF16913SEG:segSUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI000B460D0C
UniProt:A0A287JB08MapMan:24.2.1.6::::
Description
No Description!
Coordinates
chrchr2H:+:706294262..706299586
Molecular Weight (calculated)
44066.7 Da
IEP (calculated)
6.779
GRAVY (calculated)
0.470
Length
412 amino acids
Sequence
(BLAST)
001: KTTRIPVTSG LQDTEYSVRI LAKSIDMGAA GEIHLQIAGT RGEQGAEGVA DNGTSPATAA PAPPSMSERV QWWAVVLVNI VLVLAGQSVA NLLGRIYYDQ
101: GGGSLWIATV VQSCGTPLAI PLLLYFRRRP KAATTAVTRP PLIKISAIYA GLGVLLAGDN LMYSYALLYL PLSTYSLICA TQLSFNAVFS YFLNKEKFTA
201: LILNSVVLLT FSAALVGVSH GSDGTNSSVP AGKFPLGFAL TLSASALFSL ILSLMQLTFD KVLKSDTFYD VMEMQFWSNT AAAVVSVAGL FISGEWSTLG
301: GEMDGYKKGK VAYGMTLAWT AISWQLTTVG MMGLVAAVSS LFTNVISTVG LPLSPIVAVI FFGDRMDGVK VLAMLLGVWG FFSYMYQHYL DDAKAKKILA
401: ERLADDDEQQ TC
Best Arabidopsis Sequence Match ( AT1G44750.1 )
(BLAST)
001: MAKEPVRVLV TGAAGNQEPI LVKEESVVGI PTPLLKLKSW QWWVLVSVNI FFLIGGQAAS VLLGRFYYDE GGNSKWMATL VQTAAFPILY IPLLLLPSSA
101: SVESSESSCS LKYIVLIYVL LGVIIAGDNM LYSVGLLYLS ASTYSLICAT QLAFNAVFSY FINAQKFTAL ILNSVVLLSF SAALIALNDD ADTPSGVSRS
201: KYIVGFVCTL AASALYSLLL SLMQFSFEKI LKRETFSVVL EMQIYTSLVA TCVSVIGLFA SGEWRTLHGE MEGYHKGQAS YVLTLVWTAV TWQVCSVGVV
301: GLIFLVTSLF SNVISTLSLA VTPLAALVVF RDKMSGVKIM AMLIAIWGFA SYVYQNHIDD LKVRQARQQA QAGRVEPPC
Arabidopsis Description
PUP11Probable purine permease 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPF6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.