Factsheet for HORVU4Hr1G078210.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
endoplasmic reticulum 2
golgi 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G302200.1	Wheat	plastid	91.79	92.27
TraesCS4B01G304200.1	Wheat	plastid	91.54	92.01
TraesCS4A01G404400.1	Wheat	plastid	91.28	91.28
HORVU4Hr1G078220.1	Barley	endoplasmic reticulum, plasma membrane	61.54	88.24
Zm00001d027979_P001	Maize	plasma membrane	66.41	83.01
Zm00001d048232_P001	Maize	plastid	76.15	78.99
Zm00001d027978_P001	Maize	plastid	76.92	77.52
Os03t0187800-01	Rice	plastid	77.69	75.94
OQU93095	Sorghum	plasma membrane	58.97	60.85
HORVU2Hr1G127610.1	Barley	cytosol, plasma membrane	14.1	46.22
HORVU5Hr1G069880.1	Barley	plasma membrane	30.0	43.33
HORVU5Hr1G104050.3	Barley	cytosol, peroxisome, plasma membrane	41.03	38.37
HORVU5Hr1G069960.1	Barley	cytosol, plasma membrane	40.26	36.43
Solyc12g057090.1.1	Tomato	plasma membrane	27.69	36.36
VIT_18s0001g06300.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	28.97	35.76
Solyc12g057100.1.1	Tomato	cytosol, golgi, plasma membrane	32.82	35.36
PGSC0003DMT400045771	Potato	endoplasmic reticulum, extracellular, plasma membrane	15.38	35.29
HORVU2Hr1G127530.7	Barley	endoplasmic reticulum, plasma membrane	29.23	32.76
HORVU5Hr1G069920.5	Barley	cytosol	23.33	32.73
PGSC0003DMT400045772	Potato	cytosol, peroxisome, vacuole	26.67	32.7
HORVU5Hr1G069910.2	Barley	cytosol, peroxisome, plasma membrane	29.74	31.61
HORVU2Hr1G105340.1	Barley	golgi, peroxisome, plasma membrane	28.97	28.9
HORVU2Hr1G105300.1	Barley	peroxisome	27.69	28.88
HORVU3Hr1G062690.1	Barley	plastid	28.21	27.5
HORVU2Hr1G105240.3	Barley	peroxisome	28.97	27.43
HORVU2Hr1G105360.5	Barley	peroxisome	28.72	27.18
HORVU1Hr1G085230.1	Barley	mitochondrion	27.69	26.54
HORVU1Hr1G085140.1	Barley	endoplasmic reticulum	25.38	26.19
HORVU5Hr1G088530.5	Barley	cytosol, endoplasmic reticulum, peroxisome	27.69	26.15
HORVU6Hr1G066740.2	Barley	golgi, mitochondrion	27.69	25.84
HORVU7Hr1G086680.1	Barley	mitochondrion	12.56	25.52
HORVU1Hr1G085120.1	Barley	plastid	26.15	25.5
HORVU1Hr1G085150.1	Barley	plastid	24.87	22.88
HORVU5Hr1G019740.1	Barley	cytosol, plastid	16.15	18.92

Protein Annotations

EMBL:AK364633	EMBL:AK364651	EMBL:AK366105	EnsemblPlants:HORVU4Hr1G078210.1	EnsemblPlantsGene:HORVU4Hr1G078210	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
InterPro:PUP_plant	PANTHER:PTHR31376	PANTHER:PTHR31376:SF6	PFAM:PF16913	SEG:seg	TMHMM:TMhelix
UniParc:UPI0002006B41	UniProt:F2DL65	MapMan:24.2.1.6	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DL65]

Coordinates

chrchr4H:-:606747310..606749097

Molecular Weight (calculated)

40959.0 Da

IEP (calculated)

9.903

GRAVY (calculated)

0.608

Length

390 amino acids

Sequence
(BLAST)

001: MATTAASASP GPAIQEAAKT PSASPPRATA TSPARYRPSP LVVFSACLVL IGSSGPLLLR VYFVHGGQRL WLSALVQISG WPLLLPPLCV SLFRGRRHGI
101: ANLLLPARLV GTAVVLGSLY AVSCYVYAMG SQALPLSTSS LLLATQLAFT AVFAFLFVGL RFTPFSANAV MLLTIGPAVL GVGPGSGKPA GEPSKTYWTG
201: FCEAIAAAAL AGLVLPLVEV AMERFGRRTG PAARAPPPYS TVMQMQAMMG AAGTMVCLLG MAIKTDFKAM PSEAAAYGLG ETKYYLVLVW GAVSWQMLNL
301: GVVGLITCAS SLLAGIMVAV LLPLSEVLAV IFLHEKFDGP KGIALVLSLW GFASYMYGEK VQQKKLEAQK SQLLQQQVAK KTGDLELAIH

Best Arabidopsis Sequence Match ( AT1G28220.1 )
(BLAST)

001: MVKALVIINC IILAIGNCGG PLIMRLYFNN GGKRIWFSTF LETAGFPVIF IPLLFSYITR RRSNNVGDST SFFLIKPRLL IAAVIVGILS GFDNYLYAYG
101: IAYLPVSTAA LIIASQLAFI AIFSFFMVKH KFTPFTINAV VLLTVGAAVL GMHTETDKPV HETHKQYITG FLITVAAAVM YAFILPLVEL AYQKAKQTMS
201: YTLVLEFQLI LCLLASIVSV IGMFIAGDFK ALPKEAREFK LGEALFYVVA VFSAIIWQGF FLGAIGLIFS TSSLVSGIMI SVLLPITEVL AVIFYHEKFQ
301: AEKGLSLALS LWGFVSYFYG EIKSGEDKRR IQQEESQETE QSSLSRPISE C

Arabidopsis Description

PUP3Purine permease 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ95]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.