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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:
  • endoplasmic reticulum 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane
Any Predictor:endoplasmic reticulum, plasma membrane
MultiLoc:endoplasmic reticulum
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5B01G245000.1 Wheat plasma membrane 51.15 64.03
HORVU5Hr1G104050.3 Barley cytosol, peroxisome, plasma membrane 60.34 50.36
HORVU5Hr1G069880.1 Barley plasma membrane 38.51 49.63
PGSC0003DMT400054207 Potato plasma membrane 25.0 49.15
Os09t0467300-02 Rice cytosol, endoplasmic reticulum, plasma membrane 54.89 48.97
Zm00001d005933_P001 Maize golgi, plasma membrane, plastid 47.41 48.96
KXG35809 Sorghum plasma membrane 52.87 47.3
HORVU5Hr1G069960.1 Barley cytosol, plasma membrane 51.72 41.76
HORVU5Hr1G069920.5 Barley cytosol 33.05 41.37
CDY72169 Canola plasma membrane 29.89 41.11
HORVU7Hr1G086680.1 Barley mitochondrion 22.41 40.62
KRH62277 Soybean cytosol, endoplasmic reticulum, plasma membrane 38.22 37.25
KRH52994 Soybean cytosol, nucleus, plasma membrane 36.49 36.81
HORVU5Hr1G069910.2 Barley cytosol, peroxisome, plasma membrane 38.51 36.51
KRH72416 Soybean endoplasmic reticulum, plasma membrane 35.34 35.76
CDY27947 Canola plasma membrane 35.63 35.53
CDY17197 Canola extracellular, plasma membrane 35.63 35.33
VIT_18s0001g06940.t01 Wine grape endoplasmic reticulum, plasma membrane 35.63 35.33
VIT_18s0001g06910.t01 Wine grape plasma membrane 35.63 35.33
PGSC0003DMT400036604 Potato extracellular, plasma membrane 34.77 35.28
VIT_18s0001g06950.t01 Wine grape plasma membrane 35.34 35.24
Bra005474.1-P Field mustard extracellular, plasma membrane 35.34 35.04
Solyc07g008440.2.1 Tomato plasma membrane 36.21 34.33
Bra010891.1-P Field mustard plasma membrane 35.06 34.27
Solyc12g087870.1.1 Tomato plasma membrane 35.06 34.27
Solyc06g035420.1.1 Tomato extracellular, plasma membrane 32.18 34.04
PGSC0003DMT400071864 Potato plasma membrane 33.33 34.02
AT1G28230.1 Thale cress plasma membrane 34.48 33.71
CDY29741 Canola plasma membrane 35.92 33.16
Bra036866.1-P Field mustard plasma membrane 35.63 32.98
CDY12422 Canola plasma membrane 35.63 32.98
AT2G33750.1 Thale cress plasma membrane 33.62 32.68
CDY16284 Canola plasma membrane 35.34 32.63
Bra010890.1-P Field mustard plasma membrane 32.76 32.39
CDX90136 Canola plasma membrane 32.76 32.39
AT1G28220.1 Thale cress plasma membrane 32.47 32.19
CDY35722 Canola plasma membrane 32.47 31.92
PGSC0003DMT400005470 Potato extracellular, plasma membrane 32.18 31.64
Solyc04g074870.2.1 Tomato extracellular, plasma membrane 31.9 31.36
CDX94594 Canola extracellular, plasma membrane 31.32 31.23
Bra030078.1-P Field mustard extracellular, plasma membrane 31.32 31.23
CDX90135 Canola plasma membrane 28.74 30.96
CDX94595 Canola plasma membrane 31.03 30.95
PGSC0003DMT400072048 Potato extracellular, plasma membrane 23.85 30.51
PGSC0003DMT400005467 Potato plasma membrane 30.75 30.4
Solyc04g074880.2.1 Tomato plasma membrane 30.75 30.14
CDY35721 Canola plasma membrane 27.01 29.47
HORVU4Hr1G078210.1 Barley plastid 32.76 29.23
CDY15687 Canola plasma membrane 24.71 28.38
HORVU4Hr1G078220.1 Barley endoplasmic reticulum, plasma membrane 19.83 25.37
PGSC0003DMT400085139 Potato mitochondrion 27.87 25.06
HORVU3Hr1G062690.1 Barley plastid 28.74 25.0
CDY46618 Canola plasma membrane 15.52 23.79
HORVU1Hr1G085140.1 Barley endoplasmic reticulum 25.0 23.02
HORVU1Hr1G085120.1 Barley plastid 26.15 22.75
HORVU5Hr1G088530.5 Barley cytosol, endoplasmic reticulum, peroxisome 26.72 22.52
HORVU2Hr1G105300.1 Barley peroxisome 24.14 22.46
HORVU1Hr1G085230.1 Barley mitochondrion 26.15 22.36
HORVU1Hr1G085150.1 Barley plastid 25.86 21.23
HORVU6Hr1G066740.2 Barley golgi, mitochondrion 23.85 19.86
HORVU2Hr1G105340.1 Barley golgi, peroxisome, plasma membrane 22.13 19.69
PGSC0003DMT400039797 Potato mitochondrion 9.77 19.43
HORVU2Hr1G105360.5 Barley peroxisome 22.13 18.69
HORVU2Hr1G105240.3 Barley peroxisome 22.13 18.69
HORVU5Hr1G019740.1 Barley cytosol, plastid 16.95 17.72
Solyc12g087880.1.1 Tomato extracellular, plasma membrane, vacuole 7.18 14.71
HORVU2Hr1G127610.1 Barley cytosol, plasma membrane 4.31 12.61
Protein Annotations
EnsemblPlants:HORVU2Hr1G127530.7EnsemblPlantsGene:HORVU2Hr1G127530GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0016021InterPro:PUP_plantPANTHER:PTHR31376PANTHER:PTHR31376:SF12
PFAM:PF16913SEG:segSUPFAM:SSF103481TMHMM:TMhelixMapMan:24.2.1.6:
Description
No Description!
Coordinates
chrchr2H:+:767333520..767335247
Molecular Weight (calculated)
37436.0 Da
IEP (calculated)
8.393
GRAVY (calculated)
0.553
Length
348 amino acids
Sequence
(BLAST)
001: AGAEMEMEIP ANAWQWQRQW HHLRSAAAAA AKPLLVVNFL LLAVGTACGP LLLRLYFVHG GTRKWLSSLL QTAGWPLLLL PLCASFYSRS RRGRSPEGVA
101: VAGGVLLMTP RLLAASVVVG LMTGADNLLY AYGQAYLPVS TSSILISTQL AFTAAFALLL VRHRFTASTV NAVVLLTVGA AMLGMDSGGD RPTGVSGGHY
201: AAGFGTTLGA AALYGLMLPV MELSQASHDG ALTYTHVLEM QVVIGLTATA FCAVGMLVNN DFQSPTCTRV NNLALTSSCE LHCNKSNTHT VLVLIMLWPW
301: KRFSQRVCYI QIRVHFAYIY VLSLDVVADE VEASFDVSGL LVKPWFLC
Best Arabidopsis Sequence Match ( AT1G28220.1 )
(BLAST)
001: MVKALVIINC IILAIGNCGG PLIMRLYFNN GGKRIWFSTF LETAGFPVIF IPLLFSYITR RRSNNVGDST SFFLIKPRLL IAAVIVGILS GFDNYLYAYG
101: IAYLPVSTAA LIIASQLAFI AIFSFFMVKH KFTPFTINAV VLLTVGAAVL GMHTETDKPV HETHKQYITG FLITVAAAVM YAFILPLVEL AYQKAKQTMS
201: YTLVLEFQLI LCLLASIVSV IGMFIAGDFK ALPKEAREFK LGEALFYVVA VFSAIIWQGF FLGAIGLIFS TSSLVSGIMI SVLLPITEVL AVIFYHEKFQ
301: AEKGLSLALS LWGFVSYFYG EIKSGEDKRR IQQEESQETE QSSLSRPISE C
Arabidopsis Description
PUP3Purine permease 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ95]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.