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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • extracellular 5
  • golgi 4
  • plasma membrane 6
  • endoplasmic reticulum 4
  • vacuole 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX94594 Canola extracellular, plasma membrane 99.43 99.43
CDY15687 Canola plasma membrane 83.38 96.04
AT1G28220.1 Thale cress plasma membrane 86.25 85.75
CDY17197 Canola extracellular, plasma membrane 64.18 63.82
CDY27947 Canola plasma membrane 63.61 63.61
CDY29741 Canola plasma membrane 65.9 61.01
CDY12422 Canola plasma membrane 65.33 60.64
CDY16284 Canola plasma membrane 64.76 59.95
CDY35722 Canola plasma membrane 60.46 59.6
CDX90136 Canola plasma membrane 59.03 58.52
VIT_18s0001g06950.t01 Wine grape plasma membrane 56.45 56.45
KRH62277 Soybean cytosol, endoplasmic reticulum, plasma membrane 57.31 56.02
KRH72416 Soybean endoplasmic reticulum, plasma membrane 54.44 55.23
VIT_18s0001g06910.t01 Wine grape plasma membrane 55.3 54.99
KRH52994 Soybean cytosol, nucleus, plasma membrane 54.15 54.78
VIT_18s0001g06940.t01 Wine grape endoplasmic reticulum, plasma membrane 55.01 54.7
CDX90135 Canola plasma membrane 49.86 53.87
Solyc06g035420.1.1 Tomato extracellular, plasma membrane 50.72 53.8
PGSC0003DMT400036604 Potato extracellular, plasma membrane 52.44 53.35
PGSC0003DMT400071864 Potato plasma membrane 51.86 53.08
Solyc07g008440.2.1 Tomato plasma membrane 55.3 52.59
CDY46618 Canola plasma membrane 34.1 52.42
CDY72169 Canola plasma membrane 37.54 51.78
PGSC0003DMT400072048 Potato extracellular, plasma membrane 40.11 51.47
CDY35721 Canola plasma membrane 46.7 51.1
PGSC0003DMT400054207 Potato plasma membrane 25.79 50.85
Solyc12g087870.1.1 Tomato plasma membrane 51.0 50.0
Solyc12g087880.1.1 Tomato extracellular, plasma membrane, vacuole 23.5 48.24
HORVU5Hr1G069880.1 Barley plasma membrane 36.68 47.41
PGSC0003DMT400005470 Potato extracellular, plasma membrane 47.85 47.18
Solyc04g074870.2.1 Tomato extracellular, plasma membrane 46.99 46.33
PGSC0003DMT400039797 Potato mitochondrion 22.92 45.71
Zm00001d005933_P001 Maize golgi, plasma membrane, plastid 44.13 45.7
HORVU2Hr1G127610.1 Barley cytosol, plasma membrane 15.47 45.38
PGSC0003DMT400005467 Potato plasma membrane 44.7 44.32
Solyc04g074880.2.1 Tomato plasma membrane 44.7 43.94
TraesCS5A01G247600.1 Wheat plasma membrane 46.13 42.71
TraesCS5B01G244800.1 Wheat plasma membrane 46.13 42.71
TraesCS5D01G254100.1 Wheat plasma membrane 45.85 42.44
KXG35809 Sorghum plasma membrane 46.13 41.39
TraesCS2B01G617100.1 Wheat plasma membrane 42.98 41.32
Os09t0467300-02 Rice cytosol, endoplasmic reticulum, plasma membrane 46.13 41.28
TraesCS5A01G429100.1 Wheat plasma membrane 44.7 40.52
TraesCS5D01G437200.1 Wheat plasma membrane 44.7 40.41
TraesCS5B01G431200.2 Wheat plasma membrane 44.41 40.26
PGSC0003DMT400085139 Potato mitochondrion 43.55 39.28
TraesCS5A01G247700.1 Wheat plasma membrane 42.12 38.89
TraesCS5B01G245000.1 Wheat plasma membrane 30.37 38.13
TraesCS5B01G244900.1 Wheat plasma membrane 40.4 37.2
HORVU5Hr1G104050.3 Barley cytosol, peroxisome, plasma membrane 44.41 37.17
TraesCS5D01G254200.2 Wheat plasma membrane 42.69 36.34
HORVU5Hr1G069960.1 Barley cytosol, plasma membrane 42.12 34.11
CDY36342 Canola endoplasmic reticulum, plasma membrane, vacuole 27.79 32.44
CDY12545 Canola plasma membrane 27.22 31.88
HORVU2Hr1G127530.7 Barley endoplasmic reticulum, plasma membrane 30.95 31.03
CDY01525 Canola plasma membrane 33.24 30.69
CDX90414 Canola plasma membrane 32.95 30.67
CDY08900 Canola plasma membrane 26.36 29.58
CDX76537 Canola plasma membrane 32.66 29.23
CDY08899 Canola cytosol, peroxisome, plasma membrane 32.66 29.23
CDY08897 Canola plasma membrane 32.09 28.64
CDY09533 Canola plasma membrane 26.07 28.44
CDY02338 Canola plasma membrane 25.79 28.12
CDY09527 Canola plasma membrane 25.79 28.12
CDX76826 Canola cytosol, peroxisome, plasma membrane 30.37 27.97
CDY34789 Canola cytosol, peroxisome, plasma membrane 30.37 27.97
CDY08895 Canola plasma membrane 31.52 27.85
CDX76538 Canola plasma membrane 31.23 27.81
CDX76540 Canola plasma membrane 31.52 27.71
HORVU7Hr1G086680.1 Barley mitochondrion 15.19 27.6
CDX99493 Canola plasma membrane 30.66 27.3
CDX78835 Canola plasma membrane 30.37 27.11
CDY54350 Canola plasma membrane 24.64 25.9
CDX76536 Canola plasma membrane 21.49 25.6
CDY14989 Canola plasma membrane 30.37 25.54
CDX71327 Canola plasma membrane 30.37 25.48
CDX75141 Canola plasma membrane 23.78 25.0
CDY39353 Canola plasma membrane 23.78 21.73
CDX78833 Canola cytosol, extracellular, plasma membrane 29.8 21.62
CDY29404 Canola plasma membrane 23.21 21.26
CDY29403 Canola plasma membrane 22.64 20.52
CDY39352 Canola plasma membrane 22.92 20.51
CDX99494 Canola plasma membrane 29.8 20.27
CDY53149 Canola plasma membrane 22.35 19.85
CDY29401 Canola plasma membrane 19.48 19.77
CDX96651 Canola plasma membrane 23.78 19.62
CDY67986 Canola plasma membrane 20.92 19.57
CDX93469 Canola plasma membrane 20.63 18.65
CDY22619 Canola plasma membrane 20.06 18.57
CDX94937 Canola plasma membrane 20.06 18.47
CDY31805 Canola plasma membrane 22.35 17.61
CDY64442 Canola plasma membrane 19.48 17.39
CDY63252 Canola extracellular 19.77 15.97
CDX73177 Canola plasma membrane 18.62 15.37
CDY63702 Canola plasma membrane 24.07 10.95
CDX96650 Canola cytosol, plasma membrane, vacuole 0.0 0.0
Protein Annotations
MapMan:24.2.1.6GO:A0A078DZ26EnsemblPlants:CDX94595ProteinID:CDX94595ProteinID:CDX94595.1GO:GO:0003674
GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021
EnsemblPlantsGene:GSBRNA2T00157880001PFAM:PF16913PANTHER:PTHR31376PANTHER:PTHR31376:SF1InterPro:PUP_plantSUPFAM:SSF103481
TMHMM:TMhelixUniParc:UPI0004EEAFC4SEG:seg:::
Description
BnaC07g10630D
Coordinates
chrLK031883:-:37577..38705
Molecular Weight (calculated)
38920.6 Da
IEP (calculated)
8.845
GRAVY (calculated)
0.701
Length
349 amino acids
Sequence
(BLAST)
001: MARALVIINC IILAIGNCGG PLIMRLYFNN GGHRIWFSTF LETAGFPIIF IPLFFSYLNR RRSNSNEGEN TRFFLIKPRL LMAAILIGIL SGFDNYLYAY
101: GIAYLPVSTA ALIIASQLAF IAIFSYFMVS HKFTPFTINA VVLLTVGAAV LGMHTETDKP VHETHKQYMV GFLVTVAAAV MYAFLLPLVE LAYQKAKQPM
201: SYTLVLEVQM ILCFLASLVS LIGMLIAGDF KALPNEAREF KLGEAMFYVV AVLSAIIWQG FFLGAIGLIF CASSLVSGIM ISVLLPITEV LAVIFYHEKF
301: QKEKGLSLAL SLWGFVSYFY GEIKADKDKR IQEEAQLNSL PRRTRITEC
Best Arabidopsis Sequence Match ( AT1G28220.1 )
(BLAST)
001: MVKALVIINC IILAIGNCGG PLIMRLYFNN GGKRIWFSTF LETAGFPVIF IPLLFSYITR RRSNNVGDST SFFLIKPRLL IAAVIVGILS GFDNYLYAYG
101: IAYLPVSTAA LIIASQLAFI AIFSFFMVKH KFTPFTINAV VLLTVGAAVL GMHTETDKPV HETHKQYITG FLITVAAAVM YAFILPLVEL AYQKAKQTMS
201: YTLVLEFQLI LCLLASIVSV IGMFIAGDFK ALPKEAREFK LGEALFYVVA VFSAIIWQGF FLGAIGLIFS TSSLVSGIMI SVLLPITEVL AVIFYHEKFQ
301: AEKGLSLALS LWGFVSYFYG EIKSGEDKRR IQQEESQETE QSSLSRPISE C
Arabidopsis Description
PUP3Purine permease 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ95]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.