Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G18205.1 | CDX70995 | AT5G22290.1 | 21798944 |
| AT4G18205.1 | CDX88803 | AT5G22290.1 | 21798944 |
| AT4G18205.1 | CDX92368 | AT5G22290.1 | 21798944 |
| AT4G18205.1 | CDY09128 | AT5G22290.1 | 21798944 |
| AT4G18205.1 | CDY35676 | AT5G22290.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90414 | Canola | plasma membrane | 95.77 | 96.53 |
| AT4G18205.1 | Thale cress | plasma membrane | 82.8 | 83.02 |
| AT4G18197.1 | Thale cress | plasma membrane | 83.33 | 80.77 |
| CDY08895 | Canola | plasma membrane | 74.07 | 70.89 |
| CDX76540 | Canola | plasma membrane | 74.34 | 70.78 |
| CDY08900 | Canola | plasma membrane | 43.92 | 53.38 |
| CDY08899 | Canola | cytosol, peroxisome, plasma membrane | 53.97 | 52.31 |
| CDX76537 | Canola | plasma membrane | 53.97 | 52.31 |
| CDY08897 | Canola | plasma membrane | 53.17 | 51.41 |
| CDX76536 | Canola | plasma membrane | 39.15 | 50.51 |
| CDX99493 | Canola | plasma membrane | 52.38 | 50.51 |
| CDX78835 | Canola | plasma membrane | 51.85 | 50.13 |
| CDX76538 | Canola | plasma membrane | 51.59 | 49.74 |
| VIT_10s0003g02850.t01 | Wine grape | plasma membrane | 48.15 | 49.19 |
| KRH45390 | Soybean | plasma membrane | 41.27 | 48.75 |
| CDY12545 | Canola | plasma membrane | 36.77 | 46.64 |
| CDY36342 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 36.24 | 45.82 |
| KRG98518 | Soybean | plasma membrane | 49.21 | 44.93 |
| KRH46353 | Soybean | plasma membrane | 48.68 | 44.34 |
| Solyc02g071110.2.1 | Tomato | plasma membrane | 44.18 | 44.06 |
| PGSC0003DMT400025116 | Potato | plasma membrane | 44.71 | 43.78 |
| PGSC0003DMT400025123 | Potato | plasma membrane | 44.71 | 43.11 |
| PGSC0003DMT400035009 | Potato | endoplasmic reticulum, extracellular | 17.2 | 43.05 |
| Solyc02g071060.2.1 | Tomato | plasma membrane | 44.44 | 42.53 |
| Solyc02g071080.1.1 | Tomato | endoplasmic reticulum, plasma membrane, plastid, vacuole | 26.72 | 40.56 |
| Solyc02g071050.2.1 | Tomato | plasma membrane | 40.48 | 39.53 |
| VIT_10s0003g02840.t01 | Wine grape | plasma membrane | 46.03 | 39.46 |
| PGSC0003DMT400025125 | Potato | plasma membrane | 40.74 | 39.29 |
| CDY54350 | Canola | plasma membrane | 34.13 | 38.86 |
| CDX75141 | Canola | plasma membrane | 33.33 | 37.95 |
| CDY14989 | Canola | plasma membrane | 41.01 | 37.35 |
| CDX71327 | Canola | plasma membrane | 40.74 | 37.02 |
| Solyc02g071090.2.1 | Tomato | plasma membrane | 36.24 | 36.53 |
| CDX78833 | Canola | cytosol, extracellular, plasma membrane | 46.03 | 36.17 |
| Solyc02g071100.2.1 | Tomato | nucleus | 35.45 | 35.73 |
| PGSC0003DMT400035010 | Potato | endoplasmic reticulum, peroxisome, plasma membrane | 35.71 | 35.62 |
| PGSC0003DMT400025122 | Potato | plasma membrane | 35.45 | 35.54 |
| Solyc03g005810.2.1 | Tomato | endoplasmic reticulum, extracellular, plastid | 22.75 | 35.1 |
| CDY15687 | Canola | plasma membrane | 27.51 | 34.32 |
| CDX99494 | Canola | plasma membrane | 46.03 | 33.92 |
| CDX94595 | Canola | plasma membrane | 30.69 | 33.24 |
| CDX94594 | Canola | extracellular, plasma membrane | 30.69 | 33.24 |
| PGSC0003DMT400025118 | Potato | plasma membrane | 34.39 | 33.08 |
| CDX90136 | Canola | plasma membrane | 28.84 | 30.97 |
| Solyc03g005820.2.1 | Tomato | plasma membrane | 34.13 | 30.71 |
| CDY35722 | Canola | plasma membrane | 28.31 | 30.23 |
| CDY17197 | Canola | extracellular, plasma membrane | 27.78 | 29.91 |
| CDY27947 | Canola | plasma membrane | 27.51 | 29.8 |
| CDY12422 | Canola | plasma membrane | 28.57 | 28.72 |
| CDY16284 | Canola | plasma membrane | 28.31 | 28.38 |
| CDY29741 | Canola | plasma membrane | 28.31 | 28.38 |
| CDY72169 | Canola | plasma membrane | 18.52 | 27.67 |
| CDY29404 | Canola | plasma membrane | 27.78 | 27.56 |
| CDY39353 | Canola | plasma membrane | 27.51 | 27.23 |
| CDX76826 | Canola | cytosol, peroxisome, plasma membrane | 26.72 | 26.65 |
| CDX90135 | Canola | plasma membrane | 22.75 | 26.63 |
| CDY34789 | Canola | cytosol, peroxisome, plasma membrane | 26.19 | 26.12 |
| CDY02338 | Canola | plasma membrane | 21.96 | 25.94 |
| CDY35721 | Canola | plasma membrane | 21.69 | 25.71 |
| CDY64442 | Canola | plasma membrane | 26.45 | 25.58 |
| CDY46618 | Canola | plasma membrane | 15.34 | 25.55 |
| CDY09533 | Canola | plasma membrane | 21.43 | 25.31 |
| CDY09527 | Canola | plasma membrane | 21.43 | 25.31 |
| CDY29403 | Canola | plasma membrane | 25.66 | 25.19 |
| CDY53149 | Canola | plasma membrane | 25.66 | 24.68 |
| CDY39352 | Canola | plasma membrane | 25.4 | 24.62 |
| CDX94937 | Canola | plasma membrane | 24.34 | 24.27 |
| CDY22619 | Canola | plasma membrane | 24.07 | 24.14 |
| CDY67986 | Canola | plasma membrane | 23.81 | 24.13 |
| CDY63252 | Canola | extracellular | 27.25 | 23.84 |
| CDY29401 | Canola | plasma membrane | 21.69 | 23.84 |
| CDX96651 | Canola | plasma membrane | 26.19 | 23.4 |
| CDX93469 | Canola | plasma membrane | 23.81 | 23.32 |
| CDY31805 | Canola | plasma membrane | 25.66 | 21.9 |
| CDX73177 | Canola | plasma membrane | 20.63 | 18.44 |
| CDY63702 | Canola | plasma membrane | 26.19 | 12.91 |
| CDX96650 | Canola | cytosol, plasma membrane, vacuole | 0.26 | 0.64 |
Protein Annotations
| EnsemblPlants:CDY01525 | EnsemblPlantsGene:GSBRNA2T00112551001 | GO:A0A078EHJ6 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | InterPro:PUP_plant | PANTHER:PTHR31376 |
| PANTHER:PTHR31376:SF17 | PFAM:PF16913 | ProteinID:CDY01525 | ProteinID:CDY01525.1 | SEG:seg | SUPFAM:SSF103481 |
| TMHMM:TMhelix | UniParc:UPI0004EDE3ED | MapMan:24.2.1.6 | : | : | : |
Description
BnaC07g35150D
Coordinates
chrLK031927:+:389221..390437
Molecular Weight (calculated)
42172.3 Da
IEP (calculated)
5.071
GRAVY (calculated)
0.545
Length
378 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRSQELYAD GDQNLEANLI DATEPSSSVP QTKNYKRWIR LSIYVFFVLF FQPLATILGR LYYENGGEST YVVTLLPLIG FPVLILFNFF SQLRQQPKST
101: DTNVNQSPSF TTLLLVYMCT GLILSAYAYL YAIGLLYLPV STFSLILASQ LAFTAFFSYF LNSQKFTPFI VNSLFLLTVS SALLVVDTES QDTTNVSRLQ
201: YVIGFICTIG ASAGIGLLLS LIQLLFRKVF KEHTSSVVMD LTIYQSLVAS CVVLIGLFVS GEWRTLPSEM RNYKLGQVSY VVTLVSAAIS WQVYTVGLVG
301: LIFESSSVFS NSITAVGLPI VPVIAVIVFH DKMEASKIFS IVLAIWGFLS FVYQHYLDEK KLKTCNTDPV EDDGAQTW
101: DTNVNQSPSF TTLLLVYMCT GLILSAYAYL YAIGLLYLPV STFSLILASQ LAFTAFFSYF LNSQKFTPFI VNSLFLLTVS SALLVVDTES QDTTNVSRLQ
201: YVIGFICTIG ASAGIGLLLS LIQLLFRKVF KEHTSSVVMD LTIYQSLVAS CVVLIGLFVS GEWRTLPSEM RNYKLGQVSY VVTLVSAAIS WQVYTVGLVG
301: LIFESSSVFS NSITAVGLPI VPVIAVIVFH DKMEASKIFS IVLAIWGFLS FVYQHYLDEK KLKTCNTDPV EDDGAQTW
001: MGISQVHYCN GDQNLEANLL DHEETESFSV PQTKNCKRWL RVSIYAIFVI FCQPLATVLG RLYYENGGKS TYVVTLLQLI GFPVLILFRF FSRIRQPKST
101: DTNFSQSPSF TTLASVYLCT GLLVSAYAYL SAVGLLYLPV STFSLILASQ LAFTAFFSYF LNSQKFTPLI VNSLFLLTVS SALLVVNTDS ENTTNVSRVQ
201: YVIGFICTIG ASAGIGLVLS LIQLLFRKVF TKHTSSAVLD LANYQSLVAT CVVLIGLFAS GEWRTLPSEM RNYKLGKVSY ILTLASAAIF WQVYTVGCVG
301: LIFESSSVFS NSITAVGLPI VPVVAVIVFH DKMDASKIFS IILAIWGFLS FVYQHYLDEK KLKTCQTKPV EEETQTL
101: DTNFSQSPSF TTLASVYLCT GLLVSAYAYL SAVGLLYLPV STFSLILASQ LAFTAFFSYF LNSQKFTPLI VNSLFLLTVS SALLVVNTDS ENTTNVSRVQ
201: YVIGFICTIG ASAGIGLVLS LIQLLFRKVF TKHTSSAVLD LANYQSLVAT CVVLIGLFAS GEWRTLPSEM RNYKLGKVSY ILTLASAAIF WQVYTVGCVG
301: LIFESSSVFS NSITAVGLPI VPVVAVIVFH DKMDASKIFS IILAIWGFLS FVYQHYLDEK KLKTCQTKPV EEETQTL
Arabidopsis Description
PUP22Probable purine permease 22 [Source:UniProtKB/Swiss-Prot;Acc:Q8RY74]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.