Factsheet for HORVU7Hr1G040990.20

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

mitochondrion 1
plasma membrane 2
extracellular 1
endoplasmic reticulum 2
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
TargetP:	secretory
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G203200.1	Wheat	cytosol, plasma membrane, vacuole	93.59	90.63
TraesCS7B01G106900.1	Wheat	cytosol, plasma membrane, vacuole	93.84	89.46
TraesCS7A01G200200.1	Wheat	cytosol, plasma membrane, vacuole	93.22	88.54
HORVU7Hr1G040880.7	Barley	cytosol, plasma membrane	76.0	78.17
Os06t0250600-01	Rice	cytosol	82.29	76.34
KXG19708	Sorghum	cytosol	81.78	76.23
GSMUA_Achr8P22950_001	Banana	cytosol	50.63	74.49
Zm00001d037289_P002	Maize	cytosol	81.16	74.08
Zm00001d044717_P001	Maize	cytosol	81.03	73.38
HORVU7Hr1G040970.5	Barley	cytosol	79.4	66.25
GSMUA_Achr9P15840_001	Banana	cytosol, mitochondrion, plasma membrane, vacuole	67.59	63.67
VIT_17s0000g01980.t01	Wine grape	golgi, plasma membrane	58.04	63.2
Solyc03g097940.2.1	Tomato	plasma membrane	58.92	60.36
VIT_11s0016g05810.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	59.92	57.06
KRH60563	Soybean	mitochondrion, plasma membrane	52.26	53.4
HORVU2Hr1G077680.12	Barley	cytosol	48.87	50.72
HORVU3Hr1G068040.1	Barley	plasma membrane	17.46	32.48
HORVU3Hr1G072850.15	Barley	plastid	20.85	32.42
HORVU3Hr1G058300.1	Barley	plasma membrane	31.66	28.06
HORVU3Hr1G028670.16	Barley	plasma membrane	24.12	27.08
HORVU2Hr1G083820.1	Barley	cytosol	24.5	26.97
HORVU1Hr1G065250.2	Barley	plastid	29.65	26.58

Protein Annotations

Gene3D:1.10.287.630	Gene3D:1.10.287.70	Gene3D:1.25.40.20	Gene3D:2.60.120.10	MapMan:24.3.2.2	UniProt:A0A287W7E0
InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	GO:GO:0003674	GO:GO:0005215	GO:GO:0005216
GO:GO:0005244	GO:GO:0005249	GO:GO:0005267	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0006810	GO:GO:0006811	GO:GO:0006813	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0034765	GO:GO:0055085	GO:GO:0071805	EnsemblPlantsGene:HORVU7Hr1G040990	EnsemblPlants:HORVU7Hr1G040990.20
InterPro:IPR000595	InterPro:IPR002110	InterPro:IPR014710	InterPro:IPR020683	InterPro:IPR021789	InterPro:IPR036770
InterPro:Ion_trans_dom	InterPro:KHA_dom	InterPro:K_chnl_volt-dep_EAG/ELK/ERG	PFAM:PF00027	PFAM:PF00520	PFAM:PF11834
PFAM:PF12796	PRINTS:PR01463	PFscan:PS50042	PFscan:PS50088	PFscan:PS50297	PFscan:PS51490
PANTHER:PTHR10217	PANTHER:PTHR10217:SF478	InterPro:RmlC-like_jellyroll	SMART:SM00100	SMART:SM00248	SUPFAM:SSF48403
SUPFAM:SSF51206	SUPFAM:SSF81324	TMHMM:TMhelix	UniParc:UPI000B470632	InterPro:cNMP-bd-like	InterPro:cNMP-bd_dom
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr7H:-:112358867..112365996

Molecular Weight (calculated)

90100.8 Da

IEP (calculated)

6.475

GRAVY (calculated)

-0.091

Length

796 amino acids

Sequence
(BLAST)

001: HDHIILPDNK LYLLWTKFIL VWAVYSSFFT PFEFGFFRGL PDKLFVLDIV GQIAFLIDIV LKFFVAYRDP DTYRIVHSPT SIALRYCKSN FIFDLLGCFP
101: WDIIYKASGS KEEVRYLLWI RLTRALKVTE FFRDLEKDIR VNYLFTRIVK LIVVELYCTH TAACIFYYLA TTLPESMEAN TWIGSLKLGE YSYDHFRELD
201: LIKLYITSLY FAIVTMATVG YGDIHAVNVR EMIFVMIYVS FDMILGAYLI GNMTALIVKG SRTERFRDKM KEVIRYMNRN KLGKEIREQI KGHLRLQYES
301: SYTEASVLQD IPISIRAKIS QTLYKPYVES TPLFKGCSAE FIQQIVIRLQ EEFFLPGEVI LEQGSAVDQI YFVCHGALEG VGIGEDGQEE TILMLEPENS
401: FGEIAILCNI PQPYSVRVCE LCRLLRLDKQ SFTNILEIYF VDGRKILSNL TDNNEYGGRV KQIESDITFH IGKQEAELTL RVNSAAFYGD LNQLKGLIRA
501: GADPKNTDYD GRSPLHLAAS KGYEDVAQFL IHEGADIDLA DKFGNTPLLE AVKQGHDRVA TLLFGRGAKL NLENAGSHLC MAVSKGDSDF VRRALAYGAD
601: PDSKDYDHRS PLHIAAAEGL YMMARMLVEA GASVFATDRW GTTPLDEGRK SGSKPLMMLL EQAKADELSK FPGRGEEVRG KFRSCSEPSV SQRKPPLAQR
701: SFLTSTKFLL ITDRMHPRRC SVFPNHPWDD GAERREGVTL WIPHTIDGLV RSAQEKLGMS GQGLRLLGED GARVQEVDMV HDGQKLYLVG GDGGAG

Best Arabidopsis Sequence Match ( AT3G02850.2 )
(BLAST)

001: MGGSSGGGVS YRSGGESDVE LEDYEVDDFR DGIVESRGNR FNPLTNFLGL DFAGGSGGKF TVINGIRDIS RGSIVHPDNR WYKAWTMFIL IWALYSSFFT
101: PLEFGFFRGL PENLFILDIA GQIAFLVDIV LTFFVAYRDS RTYRMIYKRS SIALRYLKST FIIDLLACMP WDIIYKAAGE KEEVRYLLLI RLYRVHRVIL
201: FFHKMEKDIR INYLFTRIVK LIFVELYCTH TAACIFYYLA TTLPASQEGY TWIGSLKLGD YSYSKFREID LWTRYTTSMY FAVVTMATVG YGDIHAVNMR
301: EMIFAMVYIS FDMILGAYLI GNMTALIVKG SKTERFRDKM ADIMRYMNRN KLGRNIRGQI TGHLRLQYES SYTEAAVLQD IPVSIRAKIA QTLYLPYIEK
401: VPLFRGCSSE FINQIVIRLH EEFFLPGEVI MEQGSVVDQL YFVCHGVLEE IGITKDGSEE IVAVLQPDHS FGEISILCNI PQPYTVRVAE LCRILRLDKQ
501: SFMNILEIFF HDGRRILNNL LEGKESNVRI KQLESDITFH ISKQEAELAL KLNSAAFYGD LYQLKSLIRA GGDPNKTDYD GRSPLHLAAS RGYEDITLYL
601: IQESVDVNIK DKLGSTPLLE AIKNGNDRVA ALLVKEGATL NIENAGTFLC TVVAKGDSDF LKRLLSNGID PNSKDYDHRT PLHVAASEGF YVLAIQLVEA
701: SANVLAKDRW GNTPLDEALG CGNKMLIKLL EDAKNSQISS FPSGSKEPKG SFIGI

Arabidopsis Description

SKORSKOR [Source:UniProtKB/TrEMBL;Acc:A0A178VHK5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.