Factsheet for HORVU3Hr1G068040.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plasma membrane, plastid
iPSORT:	plastid
MultiLoc:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G065250.2
HORVU3Hr1G058300.1
HORVU7Hr1G098550.3

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G32650.1	HORVU3Hr1G058300.1	AT2G26650.1	12678562
AT4G32650.1	HORVU3Hr1G058300.1	AT2G26650.1	15299147
AT4G32650.1	HORVU1Hr1G065250.2	AT4G22200.1	12678562
AT4G32650.1	HORVU7Hr1G098550.3	AT5G14570.1	15299147

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G246300.1	Wheat	plastid	92.29	66.39
Os01t0718700-00	Rice	endoplasmic reticulum, plasma membrane	57.48	65.95
TraesCS3A01G245200.1	Wheat	mitochondrion	92.06	65.56
Os04t0117500-00	Rice	plasma membrane	40.65	60.84
TraesCS3B01G274500.1	Wheat	plastid	80.84	53.48
Os06t0254200-00	Rice	plasma membrane, plastid	64.02	44.92
GSMUA_Achr1P05260_001	Banana	plasma membrane	61.22	41.39
GSMUA_Achr5P09770_001	Banana	plasma membrane	61.92	40.58
OQU87429	Sorghum	mitochondrion	59.11	40.48
Zm00001d011723_P002	Maize	cytosol, plasma membrane, plastid	58.88	39.38
Zm00001d011729_P002	Maize	cytosol	57.48	38.86
VIT_04s0008g04510.t01	Wine grape	cytosol, mitochondrion, peroxisome, plasma membrane	57.24	38.83
PGSC0003DMT400037608	Potato	plastid	55.84	38.36
Solyc01g010080.2.1	Tomato	plastid	56.07	38.22
PGSC0003DMT400065964	Potato	cytosol, plastid	55.61	37.72
Solyc08g068000.1.1	Tomato	plasma membrane	55.61	37.01
Zm00001d016987_P001	Maize	plasma membrane	49.77	36.16
HORVU3Hr1G072850.15	Barley	plastid	43.22	36.13
Bra037049.1-P	Field mustard	plastid	54.21	35.97
CDX68872	Canola	plastid	54.21	35.64
Bra011367.1-P	Field mustard	plastid	53.97	35.48
CDX75267	Canola	plastid	53.97	35.48
CDY13496	Canola	plastid	54.21	35.37
KRH61886	Soybean	plasma membrane	50.93	34.88
EES07044	Sorghum	cytosol, mitochondrion, peroxisome, plasma membrane	48.83	34.78
AT4G32650.1	Thale cress	plastid	53.27	34.44
CDX72366	Canola	plastid	50.7	33.64
KRH52547	Soybean	cytosol	44.16	31.82
HORVU3Hr1G028670.16	Barley	plasma membrane	43.93	26.52
HORVU2Hr1G083820.1	Barley	cytosol	40.42	23.93
HORVU3Hr1G058300.1	Barley	plasma membrane	47.2	22.49
HORVU1Hr1G065250.2	Barley	plastid	43.46	20.95
HORVU2Hr1G077680.12	Barley	cytosol	33.18	18.51
HORVU7Hr1G040990.20	Barley	endoplasmic reticulum, plasma membrane	32.48	17.46
HORVU7Hr1G040880.7	Barley	cytosol, plasma membrane	30.14	16.67
CDY61287	Canola	plasma membrane	18.93	15.28
HORVU7Hr1G040970.5	Barley	cytosol	32.71	14.68
Bra021279.1-P	Field mustard	nucleus	16.36	12.24
CDY10020	Canola	cytosol	4.67	5.87

Protein Annotations

Gene3D:1.10.287.70	Gene3D:2.60.120.10	MapMan:24.3.2.2	UniProt:A0A287LGY6	GO:GO:0003674	GO:GO:0005215
GO:GO:0005216	GO:GO:0005249	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005783	GO:GO:0005886	GO:GO:0006810	GO:GO:0006811	GO:GO:0006813	GO:GO:0008150
GO:GO:0009605	GO:GO:0009607	GO:GO:0009624	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0034220	GO:GO:0055085	GO:GO:0071805	EnsemblPlantsGene:HORVU3Hr1G068040	EnsemblPlants:HORVU3Hr1G068040.1	InterPro:IPR000595
InterPro:IPR014710	InterPro:Ion_trans_dom	InterPro:K_chnl_volt-dep_EAG/ELK/ERG	PFAM:PF00520	PRINTS:PR01463	PFscan:PS50042
PANTHER:PTHR10217	PANTHER:PTHR10217:SF537	InterPro:RmlC-like_jellyroll	SUPFAM:SSF51206	SUPFAM:SSF81324	TMHMM:TMhelix
UniParc:UPI000B483F2B	InterPro:cNMP-bd-like	InterPro:cNMP-bd_dom	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr3H:-:516557708..516561592

Molecular Weight (calculated)

48720.7 Da

IEP (calculated)

8.852

GRAVY (calculated)

0.246

Length

428 amino acids

Sequence
(BLAST)

001: SRTLLPPNVG VSTVHLPEAL GGASPPLRPN VINPYGRPYR YWQMLLIVLV AYSAWASPFE LALEKSASPA HLVADLVVDV FFCADIVVSF FVAYRDRSTD
101: LLVDDRSKIA ARYLTRPSFV LDVASTVPLQ IVYQLVRGKR NGPCGFLILL RLWRLRRASK LFARLEKDTR FSYFWTRFIK LFCVALFAVH CASCVYLWLA
201: FHYRDKEQTW IGSLRSDFKE RSVWFAYTYA VYWSMTTMAT VGYGDLHAAN TGEKVFSIFF MLCNMGLACY VIGNMTNLVV HGATTTFRMR DMVDQVARYG
301: TANRLPAWMR EQMVESVQLR FQMAELLLPE WVLSELPKAA RSAVAQHLYK ATVEDCYLFR GVSSNLVVQL VSEMKVEFFP PKMDIVLENE IPTDCYIIAS
401: GQVFVMRIGP HGMAGEMGVL FNIPQPFT

Best Arabidopsis Sequence Match ( AT4G32650.3 )
(BLAST)

001: MSTTTTEARS PLPLLLRRGR SSTALSASTA EARSPLSILQ FRRRSSKDVR NITSVSSSLL PAFGTFIEDD NPSSKPFIVL HFDRRYRLWE LFLVILVGYS
101: AWASLFELAF EKAAEGALLT IDLVVDFFFA VDIILTFFVS YLDNTTYLNV TDHKLIAKRY LKSVAFVMDV ASTLPIQFIY KTITGDVGRG QAFGFLNLLR
201: LWRLRRVAEL FKRLEKDAHF NYFVIRVIKL LCVTIFWIHL AGCILYWIAY HYPRPTDTWI GSQVEDFKER SVWLGYTYSM YWSIVTLTTV GYGDLHAVNS
301: REKTFNMFYM LFNIGLTSYI IGIMTNLVVH GALRTFAMRS AINDILRYTS KNRLPDTMRE QMLAHMQLKF KTAELRQEEV LQDLPKAIRS SINQHLFRSI
401: IEEAYLFKGF PEGLLVQLVS QIQAEYFPPK MEIILQNEIP TDFYVIVSGG VDIIASKGVS EQVLAKLGPG SMAGEIGVVF NIPQPFTVRT RRLSQVIRIG
501: HHKFKEMVQS DNDVDAKMII ANFMTYLKGL NDELKKEIPF LRDLLDDADA QVQETVQSEE TPQSNDEEIV TVSRHENGQK ERRREGVPKR VIIHGQAPPN
601: QDNKNNGDSN GRLIILPDSI QLLFDLAEKK LGKRGSTIAM ADGAHVEQID ALRENDHLYI F

Arabidopsis Description

KAT3KC1 [Source:UniProtKB/TrEMBL;Acc:A0A178UVX9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.