CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX71184	Canola	plasma membrane	32.84	15.26
CDY51528	Canola	cytosol	36.36	14.96
CDX74231	Canola	plasma membrane	36.07	14.84
CDX92017	Canola	plasma membrane	36.07	14.84
CDY28715	Canola	cytosol	36.07	14.82
CDY32059	Canola	plasma membrane	32.84	13.69
CDY55714	Canola	cytosol, plasma membrane, vacuole	27.57	10.92
CDX68851	Canola	plasma membrane	27.27	10.85
CDY35373	Canola	cytosol, plasma membrane, vacuole	27.27	10.81
CDY11516	Canola	cytosol	27.27	10.6
CDX76746	Canola	cytosol	26.98	10.47
CDX79135	Canola	plasma membrane	24.05	10.41
CDX75249	Canola	plasma membrane	26.69	10.39
CDX82921	Canola	cytosol	24.05	9.51
CDY61287	Canola	plasma membrane	14.66	9.43
GSMUA_Achr1P05260_001	Banana	plasma membrane	13.49	7.27
VIT_04s0008g04510.t01	Wine grape	cytosol, mitochondrion, peroxisome, plasma membrane	12.61	6.81
CDX68872	Canola	plastid	12.9	6.76
CDY33464	Canola	cytosol, plasma membrane, plastid	13.2	6.76
CDY62359	Canola	cytosol, plasma membrane, plastid	13.2	6.76
Os06t0254200-00	Rice	plasma membrane, plastid	12.02	6.72
OQU87429	Sorghum	mitochondrion	12.32	6.72
CDY03233	Canola	plasma membrane	12.9	6.71
GSMUA_Achr5P09770_001	Banana	plasma membrane	12.61	6.58
PGSC0003DMT400037608	Potato	plastid	12.02	6.58
CDY35154	Canola	plasma membrane	12.61	6.54
PGSC0003DMT400065964	Potato	cytosol, plastid	12.02	6.5
CDX75267	Canola	plastid	12.32	6.45
Solyc08g068000.1.1	Tomato	plasma membrane	12.02	6.38
Solyc01g010080.2.1	Tomato	plastid	11.73	6.37
CDX72366	Canola	plastid	12.02	6.36
CDY13496	Canola	plastid	12.02	6.25
CDY34066	Canola	endoplasmic reticulum, plasma membrane	10.85	6.12
Zm00001d011723_P002	Maize	cytosol, plasma membrane, plastid	11.44	6.09
KRH61886	Soybean	plasma membrane	11.14	6.08
Zm00001d011729_P002	Maize	cytosol	11.14	6.0
CDX78839	Canola	plasma membrane	12.02	5.99
CDX99479	Canola	plasma membrane	12.02	5.99
KRH52547	Soybean	cytosol	10.26	5.89
EES07044	Sorghum	cytosol, mitochondrion, peroxisome, plasma membrane	10.26	5.82
CDX76529	Canola	plasma membrane	11.73	5.62
TraesCS3D01G246300.1	Wheat	plastid	9.09	5.21
Zm00001d016987_P001	Maize	plasma membrane	8.8	5.09
TraesCS3A01G245200.1	Wheat	mitochondrion	8.8	4.99
TraesCS3B01G274500.1	Wheat	plastid	9.38	4.95
HORVU3Hr1G068040.1	Barley	plasma membrane	5.87	4.67
Os01t0718700-00	Rice	endoplasmic reticulum, plasma membrane	3.23	2.95
Os04t0117500-00	Rice	plasma membrane	1.17	1.4

Protein Annotations

Gene3D:1.25.40.20	Gene3D:2.60.120.10	MapMan:35.1	UniProt:A0A078F6E2	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	EnsemblPlants:CDY10020	ProteinID:CDY10020	ProteinID:CDY10020.1	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00031803001	InterPro:IPR000595	InterPro:IPR002110	InterPro:IPR014710	InterPro:IPR020683
InterPro:IPR036770	PFAM:PF12796	PFAM:PF13857	PRINTS:PR01415	PFscan:PS50042	PFscan:PS50088
PFscan:PS50297	PANTHER:PTHR10217	PANTHER:PTHR10217:SF514	InterPro:RmlC-like_jellyroll	SMART:SM00248	SUPFAM:SSF48403
SUPFAM:SSF51206	UniParc:UPI0004EEEED5	InterPro:cNMP-bd-like	InterPro:cNMP-bd_dom	:	:

Description

BnaC08g44310DBnaC08g44310D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F6E2]

Coordinates

chrLK032000:+:497168..498864

Molecular Weight (calculated)

38008.7 Da

IEP (calculated)

5.894

GRAVY (calculated)

-0.158

Length

341 amino acids

Sequence
(BLAST)

001: MVIKYNDEYE NKTIQDIPAF MRIKAVKFDQ EFYASGSTVA EENSIMKELK ILYLGNLRQL QGGTILQDHV QPTRIFGLES LLLNEALPNT FQACELSRVM
101: SLRKRVFLEI LETYAHDATI VMNNVRMDRD LGFLERLTGS DFGLRLEEDD RIKSSLLNNA IFSGKFAKVT SLVQSGVSVN CVDYSKRSPL HVAASVGNFE
201: ITKFLIENGA DVNKKDSSGS TPLSEALRNE HDRVFEVLLR QVAYLGEDAN GEYLCQIILE NDVALLRGVL KQNINPNSRN KAGQTPLHIA ASVGRYEAAK
301: LLIAYGADHN LKDSSGLLPI EEAAHGQHEA ILLMLSGKLL Y

Best Arabidopsis Sequence Match ( AT3G02850.1 )
(BLAST)

001: MGGSSGGGVS YRSGGESDVE LEDYEVDDFR DGIVESRGNR FNPLTNFLGL DFAGGSGGKF TVINGIRDIS RGSIVHPDNR WYKAWTMFIL IWALYSSFFT
101: PLEFGFFRGL PENLFILDIA GQIAFLVDIV LTFFVAYRDS RTYRMIYKRS SIALRYLKST FIIDLLACMP WDIIYKAAGE KEEVRYLLLI RLYRVHRVIL
201: FFHKMEKDIR INYLFTRIVK LIFVELYCTH TAACIFYYLA TTLPASQEGY TWIGSLKLGD YSYSKFREID LWTRYTTSMY FAVVTMATVG YGDIHAVNMR
301: EMIFAMVYIS FDMILGAYLI GNMTALIVKG SKTERFRDKM ADIMRYMNRN KLGRNIRGQI TGHLRLQYES SYTEAAVLQD IPVSIRAKIA QTLYLPYIEK
401: VPLFRGCSSE FINQIVIRLH EEFFLPGEVI MEQGSVVDQL YFVCHGVLEE IGITKDGSEE IVAVLQPDHS FGEISILCNI PQPYTVRVAE LCRILRLDKQ
501: SFMNILEIFF HDGRRILNNL LEGKESNVRI KQLESDITFH ISKQEAELAL KLNSAAFYGD LYQLKSLIRA GGDPNKTDYD GRSPLHLAAS RGYEDITLYL
601: IQESVDVNIK DKLGSTPLLE AIKNGNDRVA ALLVKEGATL NIENAGTFLC TVVAKGDSDF LKRLLSNGID PNSKDYDHRT PLHVAASEGF YVLAIQLVEA
701: SANVLAKDRW GNTPLDEALG CGNKMLIKLL EDAKNSQISS FPSGSKEPKD KVYKKKCTVY FSHPGDSKEK RRRGIVLWVP RSIEELIRTA KEQLNVPEAS
801: CVLSEDEAKI IDVDLISDGQ KLYLAVET

Arabidopsis Description

SKORSKOR [Source:UniProtKB/TrEMBL;Acc:A0A178VHK5]
SUBAcon: [plasma membrane,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.