CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 2
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plasma membrane
BaCelLo:	cytosol
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra036395.1-P	Field mustard	cytosol	99.14	99.27
CDX71184	Canola	plasma membrane	88.02	98.09
AT5G37500.2	Thale cress	plasma membrane	83.62	81.24
VIT_14s0006g00230.t01	Wine grape	extracellular	12.47	72.86
CDX74231	Canola	plasma membrane	67.24	66.34
CDX92017	Canola	plasma membrane	67.24	66.34
CDY28715	Canola	cytosol	65.89	64.94
CDY51528	Canola	cytosol	65.77	64.9
VIT_14s0006g00100.t01	Wine grape	cytosol, plasma membrane, plastid	63.94	63.7
CDY10020	Canola	cytosol	13.69	32.84
CDX75267	Canola	plastid	23.47	29.49
CDY13496	Canola	plastid	23.59	29.42
CDY35154	Canola	plasma membrane	23.59	29.38
CDY03233	Canola	plasma membrane	23.35	29.12
CDY55714	Canola	cytosol, plasma membrane, vacuole	30.56	29.04
CDY35373	Canola	cytosol, plasma membrane, vacuole	30.44	28.95
CDX79135	Canola	plasma membrane	27.87	28.93
CDX68872	Canola	plastid	22.98	28.88
CDX72366	Canola	plastid	22.49	28.53
CDX78839	Canola	plasma membrane	23.59	28.22
CDX99479	Canola	plasma membrane	23.59	28.18
CDX68851	Canola	plasma membrane	29.34	28.0
CDX75249	Canola	plasma membrane	29.46	27.51
CDY33464	Canola	cytosol, plasma membrane, plastid	22.37	27.48
CDY11516	Canola	cytosol	29.1	27.14
CDY62359	Canola	cytosol, plasma membrane, plastid	22.0	27.03
CDX76746	Canola	cytosol	28.85	26.85
CDX76529	Canola	plasma membrane	23.23	26.69
CDX82921	Canola	cytosol	27.75	26.33
CDY61287	Canola	plasma membrane	16.87	26.04
CDY34066	Canola	endoplasmic reticulum, plasma membrane	16.38	22.15

Protein Annotations

Gene3D:1.10.287.70	Gene3D:1.25.40.20	Gene3D:2.60.120.10	MapMan:24.3.2.2	GO:A0A078H3V4	UniProt:A0A078H3V4
InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	EnsemblPlants:CDY32059	ProteinID:CDY32059	ProteinID:CDY32059.1
GO:GO:0003674	GO:GO:0005215	GO:GO:0005216	GO:GO:0005244	GO:GO:0005249	GO:GO:0005267
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0006810	GO:GO:0006811	GO:GO:0006813
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0034765	GO:GO:0055085
GO:GO:0071805	EnsemblPlantsGene:GSBRNA2T00051374001	InterPro:IPR000595	InterPro:IPR002110	InterPro:IPR014710	InterPro:IPR020683
InterPro:IPR021789	InterPro:IPR036770	InterPro:Ion_trans_dom	InterPro:KHA_dom	InterPro:K_chnl_volt-dep_EAG/ELK/ERG	PFAM:PF00027
PFAM:PF00520	PFAM:PF11834	PFAM:PF12796	PRINTS:PR01415	PRINTS:PR01463	PFscan:PS50042
PFscan:PS50088	PFscan:PS50297	PFscan:PS51490	PANTHER:PTHR10217	PANTHER:PTHR10217:SF478	InterPro:RmlC-like_jellyroll
SMART:SM00100	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF51206	SUPFAM:SSF81324	TMHMM:TMhelix
UniParc:UPI0004EDBB62	InterPro:cNMP-bd-like	InterPro:cNMP-bd_dom	:	:	:

Description

BnaA07g03930DBnaA07g03930D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H3V4]

Coordinates

chrLK032286:-:125934..131718

Molecular Weight (calculated)

94034.0 Da

IEP (calculated)

5.902

GRAVY (calculated)

-0.169

Length

818 amino acids

Sequence
(BLAST)

001: MGCLRRRQES IAEEDDINDD VSRRRGGFSL AESFRWLDSP EHLKDDSDGP NEYPWIIKPS ISRWYKAWEL FILVWAIYSS LFTPMEFGFF RGLPENLFIL
101: DIVGQIAFLV DIVLQFFVAF QDKHNYRIDS KPTHIALRYL KSHFFLDLVS CFPWDLIYKA SGKHEVVRYI LWIRLFRVRK VIEFFQRLEK DTRINYLFTR
201: ILKLIFVEVY CTHTAACIFY YLATTLPAEN EGYTWIGSLK LGDYSYENFR KIDIWKRYTT SLYFAIVTMA TVGYGDIHAV NLREMIFVMI YVSFDMVLGA
301: YLIGNITALI VKGSNTERFR DKMNDLASFM NRKKLRGDIR SQITHHVRLQ YDSKFTNTVM LQDIPASIRA KIAQLLYTPY IEKIPLFKGC SSEFINQIVV
401: RLHEEYFFPG EVITEQGNVV DHLYFVCEGS LEALETKTDG TEDLVELLEP HTSFGDISII CNISQPFTIR VRSLCHLLRL DKQSFSNILE IYFHDGRKIL
501: NNLMEGKESN ERIKKLESDI MIHIGKQEAE LALKVNSAAF QGDIYQLKSL VRSGADPNKT DYDGRAPLHL AASRGYEDIT LFLIQEGVDI NQKDKFGNTP
601: LLEAVKAGQD RVIDLLVKEG ASFDLEDAGN FLCTVVVKGD SDFLKRLLSS GMDPNTEDYD HRTPLHVAAS EGLFLMAKML VEAGASVVAK DRWGNSPLDE
701: ARMCGNKKLI KLLEDADTAQ PYIRPSSFHE PQDEKFERRK CTVFPFHPHE EPSRKHGVMV WLPRDLQKLV ETAAQELGIS NEVSFVILAE EGGRITDIDM
801: ISDGQKLYLI SDSTDQST

Best Arabidopsis Sequence Match ( AT5G37500.1 )
(BLAST)

001: MGRLRRRQEI IDHEEEESND DVSSRRGKLS LAETFRWLDS SEHRRIETDG HNDYKYIIHP KNRWYKAWEM FILVWAIYSS LFTPMEFGFF RGLPERLFVL
101: DIVGQIAFLV DIVLQFFVAY RDTQTYRTVY KPTRIAFRYL KSHFLMDFIG CFPWDLIYKA SGKHELVRYL LWIRLFRVRK VVEFFQRLEK DTRINYLFTR
201: ILKLLFVEVY CTHTAACIFY YLATTLPPEN EGYTWIGSLK LGDYSYENFR EIDLWKRYTT ALYFAIVTMA TVGYGDIHAV NLREMIFVMI YVSFDMVLGA
301: YLIGNITALI VKGSNTERFR DKMNDLISFM NRKKLGRDLR SQITGHVRLQ YDSHYTDTVM LQDIPASIRA KIAQLLYLPY IKKVPLFKGC STEFINQIVI
401: RLHEEYFLPG EVITEQGNVV DHLYFVCEGL LEALVTKTDG SEESVTLLGP HTSFGDISII CNISQPFTVR VCELCHLLRL DKQSFSNILE IYFHDGRTIL
501: NNIMEEKESN DRIKKLESDI VIHIGKQEAE LALKVNSAAF QGDFYQLKSL IRSGADPNKT DYDGRSPLHL AACRGYEDIT LFLIQEGVDV NLKDKFGHTP
601: LFEAVKAGQE GVIGLLVKEG ASFNLEDSGN FLCTTVAKGD SDFLKRLLSS GMNPNSEDYD HRTPLHVAAS EGLFLMAKML VEAGASVISK DRWGNSPLDE
701: ARLCGNKKLI KLLEDVKNAQ SSIYPSSLRE LQEERIERRK CTVFPFHPQE AKEERSRKHG VVVWIPSNLE KLIVTAAKEL GLSDGASFVL LSEDQGRITD
801: IDMISDGHKL YMISDTTDQT

Arabidopsis Description

GORKgated outwardly-rectifying K+ channel [Source:TAIR;Acc:AT5G37500]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.