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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra021012.1-P Field mustard plasma membrane 99.86 99.86
CDY34066 Canola endoplasmic reticulum, plasma membrane 69.52 81.82
CDX99479 Canola plasma membrane 74.58 77.52
CDX78839 Canola plasma membrane 74.3 77.34
AT4G18290.2 Thale cress mitochondrion, plasma membrane 72.19 72.6
CDY35154 Canola plasma membrane 61.1 66.21
CDY03233 Canola plasma membrane 60.96 66.16
CDY33464 Canola cytosol, plasma membrane, plastid 59.41 63.51
CDY62359 Canola cytosol, plasma membrane, plastid 58.99 63.06
Os01t0756700-01 Rice plasma membrane 41.15 58.37
EES01496 Sorghum mitochondrion, plasma membrane 41.71 56.04
TraesCS3B01G328800.1 Wheat plasma membrane 39.19 55.25
TraesCS3A01G294200.1 Wheat mitochondrion, plasma membrane 38.76 55.2
TraesCS3D01G294000.1 Wheat mitochondrion, plasma membrane 38.9 55.18
Solyc02g070530.2.1 Tomato nucleus 53.09 54.94
PGSC0003DMT400054339 Potato plasma membrane 52.95 54.8
GSMUA_Achr7P09360_001 Banana plasma membrane 49.16 53.85
GSMUA_Achr10P... Banana plasma membrane 49.16 53.27
HORVU3Hr1G072850.15 Barley plastid 38.2 53.12
KRH44805 Soybean plasma membrane 54.07 52.88
Solyc08g016500.2.1 Tomato cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 50.14 52.27
PGSC0003DMT400024968 Potato cytosol, plasma membrane, vacuole 50.28 51.96
Os01t0210700-02 Rice extracellular 43.68 51.75
KRH21063 Soybean plasma membrane 56.18 51.48
VIT_10s0003g03270.t01 Wine grape plasma membrane 57.16 51.45
KRH11194 Soybean plasma membrane 56.04 51.35
GSMUA_Achr6P05630_001 Banana cytosol, nucleus, plasma membrane 47.89 50.07
GSMUA_Achr9P06470_001 Banana plasma membrane 50.28 49.58
GSMUA_Achr6P26910_001 Banana endoplasmic reticulum, peroxisome, plasma membrane 49.86 48.7
GSMUA_Achr2P09100_001 Banana plasma membrane, vacuole 50.0 47.85
GSMUA_Achr8P27260_001 Banana plasma membrane 48.46 47.59
EES06576 Sorghum plasma membrane 48.17 47.05
Os02t0245800-01 Rice plasma membrane 47.05 46.66
TraesCS6D01G152200.1 Wheat plasma membrane 47.19 46.28
TraesCS6B01G190900.1 Wheat plasma membrane 46.91 46.07
TraesCS6A01G160500.1 Wheat plasma membrane 46.77 45.87
HORVU3Hr1G028670.16 Barley plasma membrane 45.08 45.27
TraesCS3A01G132400.1 Wheat plasma membrane 45.51 45.06
TraesCS3D01G148600.1 Wheat plasma membrane 45.37 44.92
TraesCS3B01G167100.1 Wheat plasma membrane 44.94 44.51
Zm00001d053446_P001 Maize plastid 47.33 44.46
Zm00001d016160_P001 Maize plasma membrane 43.4 44.4
Solyc03g058900.1.1 Tomato cytosol 12.08 44.1
Zm00001d039386_P001 Maize plasma membrane 38.9 42.75
KRH58233 Soybean cytosol, extracellular, plasma membrane 12.36 39.64
CDX68872 Canola plastid 33.99 37.17
CDY13496 Canola plastid 34.13 37.04
CDX75267 Canola plastid 33.71 36.87
PGSC0003DMT400054318 Potato nucleus 16.15 36.51
CDX72366 Canola plastid 31.88 35.19
CDY35373 Canola cytosol, plasma membrane, vacuole 42.28 35.0
CDY55714 Canola cytosol, plasma membrane, vacuole 42.13 34.84
CDX79135 Canola plasma membrane 37.08 33.5
CDY11516 Canola cytosol 41.15 33.41
CDX68851 Canola plasma membrane 40.17 33.37
CDX76746 Canola cytosol 41.15 33.33
PGSC0003DMT400024866 Potato cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 13.48 33.22
CDX75249 Canola plasma membrane 39.89 32.42
CDX82921 Canola cytosol 36.8 30.39
Zm00001d012717_P002 Maize plasma membrane 43.4 29.97
CDY28715 Canola cytosol 28.93 24.82
CDY51528 Canola cytosol 28.79 24.73
CDX92017 Canola plasma membrane 27.81 23.88
CDX74231 Canola plasma membrane 27.81 23.88
CDX71184 Canola plasma membrane 24.44 23.71
CDY32059 Canola plasma membrane 26.69 23.23
CDY61287 Canola plasma membrane 13.9 18.68
CDY10020 Canola cytosol 5.62 11.73
Protein Annotations
Gene3D:1.10.287.70Gene3D:2.60.120.10MapMan:24.3.2.2GO:A0A078CKJ1EnsemblPlants:CDX76529ProteinID:CDX76529
ProteinID:CDX76529.1GO:GO:0003674GO:GO:0005215GO:GO:0005216GO:GO:0005249GO:GO:0005575
GO:GO:0006810GO:GO:0006811GO:GO:0006813GO:GO:0008150GO:GO:0016020GO:GO:0055085
EnsemblPlantsGene:GSBRNA2T00126954001InterPro:IPR000595InterPro:IPR014710InterPro:IPR021789InterPro:Ion_trans_domInterPro:KHA_dom
InterPro:K_chnl_volt-dep_EAG/ELK/ERGPFAM:PF00027PFAM:PF00520PFAM:PF11834PRINTS:PR01463PFscan:PS50042
PFscan:PS51490PANTHER:PTHR10217PANTHER:PTHR10217:SF551InterPro:RmlC-like_jellyrollSMART:SM00100SUPFAM:SSF51206
SUPFAM:SSF81324TMHMM:TMhelixUniParc:UPI0004EDCEC1InterPro:cNMP-bd-likeInterPro:cNMP-bd_domSEG:seg
Description
BnaA08g08710D
Coordinates
chrLK031807:-:1842841..1846960
Molecular Weight (calculated)
81203.7 Da
IEP (calculated)
8.537
GRAVY (calculated)
-0.148
Length
712 amino acids
Sequence
(BLAST)
001: MDSMKHNSFL SADLLPSLGA STNQSTKLRK HIVSPFDPRF RAWEMWLVIL VIYSAWICPF EFAFITYKKH ALFIVDNIVN GFFAIDIILT FFVANVDSHS
101: YILVDNPKKI AMRYLSTWFV FDVCSTAPFK SLSLLFNYKG SQIGFTVLSM LRLWRLRRVS LLFARLEKDI RFNYFWTRCT KLILVTLFAV HYAGCFNYLI
201: ADLYPNRRKT WIGAVYPNFK EASLWSRYVT SIYWSVTTLT TTGYGDLHAE NPREMLFSVL YVLFNLGFTS YLIGNMTNLV VHWSSHTKTF RDTLRSVSEF
301: ASRNQLPPNI HDQMLSHISL DFKSEGLKQE ETLNGLRKAT RSSIANYLYL HIAQNVYLFQ GVSHNFLFQL VSDIDAEYFP PREDVIVQNE SHTYLYILVS
401: GAVEFTAYID GENQIQGKAV VGDAFGEIGV LCYTPQPFTV STTELSQILR VHKRSLISAM RAHIEDGRII INNLFMKLRG QQSIAIDAAK KQPDVLLQKW
501: LGGSLKICEG DASDQGKGHK YLQLDDSENI DLELTKSMDS RKDGSSETKR GQEHKIKIAE EEKPNKYIDE KSFSNADVAS FKLTYPHCRF KPSKQEPAKP
601: EEKKVTIHLK SEGKYLPKLI ILPYSKVELL RLAGEKFGKQ SFTVVTNAEN VEIDDVDVIR DGEHLLGSSG RINLLKELLS ACGKPNTTSA SKFQLELYTN
701: GLLDPHSCSS EP
Best Arabidopsis Sequence Match ( AT4G18290.2 )
(BLAST)
001: MLKRKHLNTR PMSISCTRNF FKRFCVEEYN MDTFKHSSFL SADLLPSLGA RINQSTKLRK HIISPFDPRF RGWEMWLVIL VIYSAWICPF EFAFITYKKD
101: ALFIIDNIVN GFFAIDIILT FFVAYLDSHS YLLVDKPKKI AIRYLSTWFA FDVCSTAPFQ SLSLLFKYNG SEIGFRVLSM LRLWRLRRVS SLFARLEKDI
201: RFNYFWTRCT KLISVTLFAV HCAGCFAYLI ADQYHDPTKT WIGAVYPNFK ETSVWSRYVT ALYWSITTLT TTGYGDLHAE NPREMLFFVF FMLFNLGFTS
301: YLIGNMTNLV VHWTSRTRNF RDTVRAASEF ASRNQLPPNI QDQMLSHICL KFKTEGLKQQ EALNGLPKAI RSSIANYLFF PIVQNVYLFH GVSRNFLFQL
401: VSDIDAEYFP PREDVILQNE APTDLYILVS GAVDFTVYVG EEDQVQGKAV VGDAFGEIGV LCYTPQPFTV RTTELSQILR ISKKSLMSAM RAHVEDGRVI
501: MNNLFMKLRG QQSIAIDDPN SEPESLLKEW LVGGSKTGEG NASDQGHGHK YLQLHDSENI DMGSTEWRDS RRSGYGETKR VREHTIEIEE GEKPNKEFDG
601: KGCSDADLTS FEFHSQEAYP YCRSNIQIKQ HEAAKPKDKR VTIHLKSRDK DLSKLIILPA SIEELLRLAG EKFGYSFTKV TNAENAEIDD EDVIRDGDHL
701: YILINENS
Arabidopsis Description
KAT2potassium channel in Arabidopsis thaliana 2 [Source:TAIR;Acc:AT4G18290]
SUBAcon: [mitochondrion,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.