Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 2
- mitochondrion 1
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400054318 | Potato | nucleus | 44.64 | 40.95 |
| PGSC0003DMT400024968 | Potato | cytosol, plasma membrane, vacuole | 82.7 | 34.69 |
| Solyc03g058900.1.1 | Tomato | cytosol | 22.49 | 33.33 |
| PGSC0003DMT400054339 | Potato | plasma membrane | 46.71 | 19.62 |
| Bra025028.1-P | Field mustard | cytosol, endoplasmic reticulum, plasma membrane | 38.75 | 16.82 |
| CDY33464 | Canola | cytosol, plasma membrane, plastid | 38.41 | 16.67 |
| CDY62359 | Canola | cytosol, plasma membrane, plastid | 38.41 | 16.67 |
| CDY03233 | Canola | plasma membrane | 37.72 | 16.62 |
| CDY35154 | Canola | plasma membrane | 37.72 | 16.59 |
| Bra017567.1-P | Field mustard | plasma membrane | 37.37 | 16.44 |
| VIT_10s0003g03270.t01 | Wine grape | plasma membrane | 44.29 | 16.18 |
| KRH44805 | Soybean | plasma membrane | 40.48 | 16.07 |
| AT5G46240.1 | Thale cress | plasma membrane | 35.99 | 15.36 |
| CDX78839 | Canola | plasma membrane | 35.64 | 15.06 |
| CDY34066 | Canola | endoplasmic reticulum, plasma membrane | 31.49 | 15.04 |
| AT4G18290.2 | Thale cress | mitochondrion, plasma membrane | 36.68 | 14.97 |
| GSMUA_Achr10P... | Banana | plasma membrane | 33.56 | 14.76 |
| CDX99479 | Canola | plasma membrane | 34.95 | 14.74 |
| Os01t0756700-01 | Rice | plasma membrane | 25.61 | 14.74 |
| Bra013296.1-P | Field mustard | plasma membrane | 34.95 | 14.7 |
| KRH21063 | Soybean | plasma membrane | 39.45 | 14.67 |
| GSMUA_Achr6P05630_001 | Banana | cytosol, nucleus, plasma membrane | 33.91 | 14.39 |
| KRH11194 | Soybean | plasma membrane | 38.41 | 14.29 |
| GSMUA_Achr9P06470_001 | Banana | plasma membrane | 35.29 | 14.13 |
| GSMUA_Achr8P27260_001 | Banana | plasma membrane | 34.95 | 13.93 |
| GSMUA_Achr7P09360_001 | Banana | plasma membrane | 31.14 | 13.85 |
| TraesCS3A01G294200.1 | Wheat | mitochondrion, plasma membrane | 23.88 | 13.8 |
| TraesCS3D01G294000.1 | Wheat | mitochondrion, plasma membrane | 23.88 | 13.74 |
| TraesCS3B01G328800.1 | Wheat | plasma membrane | 23.88 | 13.66 |
| Zm00001d039386_P001 | Maize | plasma membrane | 30.45 | 13.58 |
| HORVU3Hr1G028670.16 | Barley | plasma membrane | 33.22 | 13.54 |
| Bra021012.1-P | Field mustard | plasma membrane | 33.22 | 13.48 |
| CDX76529 | Canola | plasma membrane | 33.22 | 13.48 |
| Os01t0210700-02 | Rice | extracellular | 28.03 | 13.48 |
| HORVU3Hr1G072850.15 | Barley | plastid | 23.88 | 13.48 |
| TraesCS3D01G148600.1 | Wheat | plasma membrane | 33.22 | 13.35 |
| GSMUA_Achr2P09100_001 | Banana | plasma membrane, vacuole | 34.26 | 13.31 |
| GSMUA_Achr6P26910_001 | Banana | endoplasmic reticulum, peroxisome, plasma membrane | 33.56 | 13.31 |
| TraesCS3B01G167100.1 | Wheat | plasma membrane | 32.87 | 13.21 |
| EES01496 | Sorghum | mitochondrion, plasma membrane | 24.22 | 13.21 |
| TraesCS3A01G132400.1 | Wheat | plasma membrane | 32.53 | 13.07 |
| Os02t0245800-01 | Rice | plasma membrane | 32.18 | 12.95 |
| PGSC0003DMT400037608 | Potato | plastid | 27.68 | 12.84 |
| Zm00001d016160_P001 | Maize | plasma membrane | 30.1 | 12.5 |
| PGSC0003DMT400065964 | Potato | cytosol, plastid | 26.99 | 12.36 |
| PGSC0003DMT400091020 | Potato | peroxisome, plasma membrane | 25.95 | 12.28 |
| TraesCS6A01G160500.1 | Wheat | plasma membrane | 30.45 | 12.12 |
| TraesCS6D01G152200.1 | Wheat | plasma membrane | 30.45 | 12.12 |
| EES06576 | Sorghum | plasma membrane | 30.1 | 11.93 |
| TraesCS6B01G190900.1 | Wheat | plasma membrane | 29.76 | 11.86 |
| PGSC0003DMT400002746 | Potato | plasma membrane | 34.95 | 11.56 |
| Zm00001d053446_P001 | Maize | plastid | 29.07 | 11.08 |
| PGSC0003DMT400074787 | Potato | cytosol, nucleus, plasma membrane | 32.53 | 10.92 |
| PGSC0003DMT400062100 | Potato | plasma membrane | 26.99 | 9.26 |
| PGSC0003DMT400061090 | Potato | cytosol | 25.95 | 9.1 |
| Zm00001d012717_P002 | Maize | plasma membrane | 28.03 | 7.86 |
| PGSC0003DMT400034446 | Potato | cytosol | 19.38 | 6.76 |
| KRH58233 | Soybean | cytosol, extracellular, plasma membrane | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400024866 | EnsemblPlantsGene:PGSC0003DMG400009614 | Gene3D:2.60.120.10 | InterPro:IPR000595 | InterPro:IPR014710 | InterPro:RmlC-like_jellyroll |
| InterPro:cNMP-bd-like | InterPro:cNMP-bd_dom | PANTHER:PTHR10217 | PANTHER:PTHR10217:SF551 | PFAM:PF00027 | PFscan:PS50042 |
| PGSC:PGSC0003DMG400009614 | SMART:SM00100 | SUPFAM:SSF51206 | UniParc:UPI000295CC04 | UniProt:M1AKQ4 | MapMan:35.1 |
Description
K+ channel inward rectifying [Source:PGSC_GENE;Acc:PGSC0003DMG400009614]
Coordinates
chr1:-:12665467..12666784
Molecular Weight (calculated)
32803.1 Da
IEP (calculated)
6.047
GRAVY (calculated)
-0.386
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: MNVLPKAIRS SIAHYLFLPI VQNVSLFRGV SRDLLFQLVP EMDVEYYPSK EDVILQNESQ TDFYIIVSGA LDILVDSDGR EQIIGKAVAR ESFGEISVLL
101: GRPQPYVVTT TEISKILCPS RKTFLNILHD NQEDEQIIMR NHFQQDTPTN PSNLISINIQ TLEARTNKQV ENESESGGRE HYIVLDHSVV SNGHIEMAPS
201: LVEKRWKEDQ LYTEHGGNKS IHKVPCYSYS GNRSQTGAIG GKSIKKRVNI HMRNNINSLQ EQNVKLIILP DTLEELFILV TTRRTDNDS
101: GRPQPYVVTT TEISKILCPS RKTFLNILHD NQEDEQIIMR NHFQQDTPTN PSNLISINIQ TLEARTNKQV ENESESGGRE HYIVLDHSVV SNGHIEMAPS
201: LVEKRWKEDQ LYTEHGGNKS IHKVPCYSYS GNRSQTGAIG GKSIKKRVNI HMRNNINSLQ EQNVKLIILP DTLEELFILV TTRRTDNDS
001: MSISCTRNFF KRFCVEEYNM DTFKHSSFLS ADLLPSLGAR INQSTKLRKH IISPFDPRFR GWEMWLVILV IYSAWICPFE FAFITYKKDA LFIIDNIVNG
101: FFAIDIILTF FVAYLDSHSY LLVDKPKKIA IRYLSTWFAF DVCSTAPFQS LSLLFKYNGS EIGFRVLSML RLWRLRRVSS LFARLEKDIR FNYFWTRCTK
201: LISVTLFAVH CAGCFAYLIA DQYHDPTKTW IGAVYPNFKE TSVWSRYVTA LYWSITTLTT TGYGDLHAEN PREMLFFVFF MLFNLGFTSY LIGNMTNLVV
301: HWTSRTRNFR DTVRAASEFA SRNQLPPNIQ DQMLSHICLK FKTEGLKQQE ALNGLPKAIR SSIANYLFFP IVQNVYLFHG VSRNFLFQLV SDIDAEYFPP
401: REDVILQNEA PTDLYILVSG AVDFTVYVGE EDQVQGKAVV GDAFGEIGVL CYTPQPFTVR TTELSQILRI SKKSLMSAMR AHVEDGRVIM NNLFMKLRGQ
501: QSIAIDDPNS EPESLLKEWL VGGSKTGEGN ASDQGHGHKY LQLHDSENID MGSTEWRDSR RSGYGETKRV REHTIEIEEG EKPNKEFDGK GCSDADLTSF
601: EFHSQEAYPY CRSNIQIKQH EAAKPKDKRV TIHLKSRDKD LSKLIILPAS IEELLRLAGE KFGYSFTKVT NAENAEIDDE DVIRDGDHLY ILINENS
101: FFAIDIILTF FVAYLDSHSY LLVDKPKKIA IRYLSTWFAF DVCSTAPFQS LSLLFKYNGS EIGFRVLSML RLWRLRRVSS LFARLEKDIR FNYFWTRCTK
201: LISVTLFAVH CAGCFAYLIA DQYHDPTKTW IGAVYPNFKE TSVWSRYVTA LYWSITTLTT TGYGDLHAEN PREMLFFVFF MLFNLGFTSY LIGNMTNLVV
301: HWTSRTRNFR DTVRAASEFA SRNQLPPNIQ DQMLSHICLK FKTEGLKQQE ALNGLPKAIR SSIANYLFFP IVQNVYLFHG VSRNFLFQLV SDIDAEYFPP
401: REDVILQNEA PTDLYILVSG AVDFTVYVGE EDQVQGKAVV GDAFGEIGVL CYTPQPFTVR TTELSQILRI SKKSLMSAMR AHVEDGRVIM NNLFMKLRGQ
501: QSIAIDDPNS EPESLLKEWL VGGSKTGEGN ASDQGHGHKY LQLHDSENID MGSTEWRDSR RSGYGETKRV REHTIEIEEG EKPNKEFDGK GCSDADLTSF
601: EFHSQEAYPY CRSNIQIKQH EAAKPKDKRV TIHLKSRDKD LSKLIILPAS IEELLRLAGE KFGYSFTKVT NAENAEIDDE DVIRDGDHLY ILINENS
Arabidopsis Description
KAT2potassium channel in Arabidopsis thaliana 2 [Source:TAIR;Acc:AT4G18290]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.