Factsheet for GSMUA_Achr6P05630_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

nucleus 2
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr2P09100_001
GSMUA_Achr3P20680_001
GSMUA_Achr4P08990_001
GSMUA_Achr4P09000_001
GSMUA_Achr5P09840_001
GSMUA_Achr5P12690_001
GSMUA_Achr6P05630_001
GSMUA_Achr6P07280_001
GSMUA_Achr6P24240_001
GSMUA_Achr6P26910_001
GSMUA_Achr7P09360_001
GSMUA_Achr8P27260_001
GSMUA_Achr9P06470_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G46240.1	GSMUA_Achr3P20680_001	AT2G26650.1	15299147
AT5G46240.1	GSMUA_Achr4P08990_001	AT2G26650.1	15299147
AT5G46240.1	GSMUA_Achr4P09000_001	AT2G26650.1	15299147
AT5G46240.1	GSMUA_Achr5P09840_001	AT2G26650.1	15299147
AT5G46240.1	GSMUA_AchrUn_...	AT2G26650.1	15299147
AT5G46240.1	GSMUA_Achr6P07280_001	AT4G22200.1	12034902
AT5G46240.1	GSMUA_Achr6P24240_001	AT4G22200.1	12034902
AT5G46240.1	GSMUA_Achr6P07280_001	AT4G22200.1	15299147
AT5G46240.1	GSMUA_Achr6P24240_001	AT4G22200.1	15299147
AT5G46240.1	GSMUA_Achr6P07280_001	AT4G22200.1	17085433
AT5G46240.1	GSMUA_Achr6P24240_001	AT4G22200.1	17085433
AT5G46240.1	GSMUA_Achr10P...	AT5G41160.1	15299147
AT5G46240.1	GSMUA_Achr5P12690_001	AT5G41160.1	15299147
AT5G46240.1	GSMUA_Achr10P...	AT5G46240.1	11042178
AT5G46240.1	GSMUA_Achr2P09100_001	AT5G46240.1	11042178
AT5G46240.1	GSMUA_Achr6P05630_001	AT5G46240.1	11042178
AT5G46240.1	GSMUA_Achr6P26910_001	AT5G46240.1	11042178
AT5G46240.1	GSMUA_Achr7P09360_001	AT5G46240.1	11042178
AT5G46240.1	GSMUA_Achr8P27260_001	AT5G46240.1	11042178
AT5G46240.1	GSMUA_Achr9P06470_001	AT5G46240.1	11042178
AT5G46240.1	GSMUA_Achr10P...	AT5G46240.1	15299147
AT5G46240.1	GSMUA_Achr2P09100_001	AT5G46240.1	15299147
AT5G46240.1	GSMUA_Achr6P05630_001	AT5G46240.1	15299147
AT5G46240.1	GSMUA_Achr6P26910_001	AT5G46240.1	15299147
AT5G46240.1	GSMUA_Achr7P09360_001	AT5G46240.1	15299147
AT5G46240.1	GSMUA_Achr8P27260_001	AT5G46240.1	15299147
AT5G46240.1	GSMUA_Achr9P06470_001	AT5G46240.1	15299147
AT5G46240.1	GSMUA_Achr10P...	AT5G46240.1	17085433
AT5G46240.1	GSMUA_Achr2P09100_001	AT5G46240.1	17085433
AT5G46240.1	GSMUA_Achr6P05630_001	AT5G46240.1	17085433
AT5G46240.1	GSMUA_Achr6P26910_001	AT5G46240.1	17085433
AT5G46240.1	GSMUA_Achr7P09360_001	AT5G46240.1	17085433
AT5G46240.1	GSMUA_Achr8P27260_001	AT5G46240.1	17085433
AT5G46240.1	GSMUA_Achr9P06470_001	AT5G46240.1	17085433

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	plasma membrane	73.86	76.56
GSMUA_Achr7P09360_001	Banana	plasma membrane	70.93	74.31
Os01t0210700-02	Rice	extracellular	52.13	59.07
CDY03233	Canola	plasma membrane	54.33	56.4
Bra017567.1-P	Field mustard	plasma membrane	54.19	56.16
CDY35154	Canola	plasma membrane	54.19	56.16
GSMUA_Achr6P26910_001	Banana	endoplasmic reticulum, peroxisome, plasma membrane	58.88	55.01
CDX99479	Canola	plasma membrane	54.92	54.6
AT5G46240.1	Thale cress	plasma membrane	54.19	54.51
CDX78839	Canola	plasma membrane	54.63	54.39
GSMUA_Achr9P06470_001	Banana	plasma membrane	57.56	54.29
Bra013296.1-P	Field mustard	plasma membrane	54.33	53.86
Os02t0245800-01	Rice	plasma membrane	56.68	53.76
CDY33464	Canola	cytosol, plasma membrane, plastid	52.13	53.3
CDY62359	Canola	cytosol, plasma membrane, plastid	51.98	53.15
EES06576	Sorghum	plasma membrane	56.83	53.09
Bra025028.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	51.84	53.0
AT4G18290.2	Thale cress	mitochondrion, plasma membrane	55.07	52.97
Solyc02g070530.2.1	Tomato	nucleus	53.45	52.91
PGSC0003DMT400054339	Potato	plasma membrane	53.16	52.62
GSMUA_Achr2P09100_001	Banana	plasma membrane, vacuole	57.42	52.55
GSMUA_Achr8P27260_001	Banana	plasma membrane	55.8	52.41
Solyc08g016500.2.1	Tomato	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	52.13	51.98
KRH44805	Soybean	plasma membrane	55.36	51.79
TraesCS6A01G160500.1	Wheat	plasma membrane	54.92	51.52
PGSC0003DMT400024968	Potato	cytosol, plasma membrane, vacuole	51.98	51.38
TraesCS6D01G152200.1	Wheat	plasma membrane	54.48	51.1
TraesCS6B01G190900.1	Wheat	plasma membrane	54.33	51.03
HORVU3Hr1G028670.16	Barley	plasma membrane	53.01	50.92
GSMUA_Achr4P09000_001	Banana	plasma membrane	41.7	50.8
TraesCS3B01G167100.1	Wheat	plasma membrane	53.6	50.76
TraesCS3D01G148600.1	Wheat	plasma membrane	53.6	50.76
TraesCS3A01G132400.1	Wheat	plasma membrane	53.45	50.63
VIT_10s0003g03270.t01	Wine grape	plasma membrane	58.3	50.19
Zm00001d053446_P001	Maize	plastid	55.8	50.13
KRH21063	Soybean	plasma membrane	57.12	50.06
Zm00001d016160_P001	Maize	plasma membrane	51.1	50.0
KRH11194	Soybean	plasma membrane	56.83	49.81
Bra021012.1-P	Field mustard	plasma membrane	50.07	47.89
CDX76529	Canola	plasma membrane	50.07	47.89
Zm00001d039386_P001	Maize	plasma membrane	45.23	47.53
GSMUA_Achr1P05260_001	Banana	plasma membrane	40.53	43.6
GSMUA_Achr5P09770_001	Banana	plasma membrane	41.12	42.88
CDY34066	Canola	endoplasmic reticulum, plasma membrane	38.03	42.81
KRH58233	Soybean	cytosol, extracellular, plasma membrane	13.51	41.44
Solyc03g058900.1.1	Tomato	cytosol	11.75	41.03
GSMUA_AchrUn_...	Banana	plasma membrane	47.14	40.58
GSMUA_Achr3P20680_001	Banana	cytosol, nucleus, plasma membrane	47.58	40.35
GSMUA_Achr5P09840_001	Banana	plasma membrane	47.58	39.51
GSMUA_Achr4P08990_001	Banana	cytosol, mitochondrion, plasma membrane	46.7	38.97
PGSC0003DMT400054318	Potato	nucleus	17.77	38.41
GSMUA_Achr6P24240_001	Banana	cytosol	41.7	35.5
PGSC0003DMT400024866	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	14.39	33.91
GSMUA_Achr6P07280_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	40.97	33.86
GSMUA_Achr8P22960_001	Banana	nucleus, peroxisome, plasma membrane	12.19	27.67
GSMUA_Achr3P16730_001	Banana	plasma membrane	24.38	22.99
GSMUA_Achr9P15840_001	Banana	cytosol, mitochondrion, plasma membrane, vacuole	27.9	22.49
GSMUA_Achr8P22950_001	Banana	cytosol	16.15	20.33

Protein Annotations

Gene3D:1.10.287.70	Gene3D:2.60.120.10	MapMan:24.3.2.2	GO:GO:0003674	GO:GO:0005215	GO:GO:0005216
GO:GO:0005249	GO:GO:0005575	GO:GO:0006810	GO:GO:0006811	GO:GO:0006813	GO:GO:0008150
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0034220	GO:GO:0055085	GO:GO:0071805
EnsemblPlantsGene:GSMUA_Achr6G05630_001	EnsemblPlants:GSMUA_Achr6P05630_001	EnsemblPlants:GSMUA_Achr6T05630_001	InterPro:IPR000595	InterPro:IPR014710	InterPro:IPR021789
InterPro:Ion_trans_dom	InterPro:KHA_dom	InterPro:K_chnl_volt-dep_EAG/ELK/ERG	UniProt:M0T4G1	PFAM:PF00027	PFAM:PF00520
PFAM:PF11834	PRINTS:PR01463	PFscan:PS50042	PFscan:PS51490	PANTHER:PTHR10217	PANTHER:PTHR10217:SF551
InterPro:RmlC-like_jellyroll	SMART:SM00100	SUPFAM:SSF51206	SUPFAM:SSF81324	TMHMM:TMhelix	UniParc:UPI0002951079
InterPro:cNMP-bd-like	InterPro:cNMP-bd_dom	SEG:seg	:	:	:

Description

Potassium channel KAT1 [Source:GMGC_GENE;Acc:GSMUA_Achr6G05630_001]

Coordinates

chr6:-:3784449..3788082

Molecular Weight (calculated)

78509.3 Da

IEP (calculated)

7.625

GRAVY (calculated)

-0.129

Length

681 amino acids

Sequence
(BLAST)

001: MDLFCAAKSY FQPFCYDGFQ ESSSSSYSFS SDLLPSLGAN INQSVKLRKF IISPYNPRYR AWQIFLIPLV IYSAWICPYE LAFLRHYPAK LLWVENILNS
101: FFAVDIILTF FVAYLDRKSY LLTDDPKKIA ARYLSSWFIF DILSTAPFQL ISFLSDSSVN GLGFKILNML RLWRLRRISS FFSRLEKDIR FNYFWTRCTK
201: LILVTLFAVH CAGCFNYLIA DRYPNPERTS IGAVMPNFKS ESLWTRYVTA IYWSITTLTT TGYGDIHAEN STEMLFYIFY MLFNLALTAY LIGNMTNLVV
301: HGTNRTRNFR DTIQAASEFA ARNHLSQNIR CQMLSHICLR FKTEGLKQQE TLNSLPKGVR TSIACYLFYP IVQQVYLFRG VSRNFLYQLV TEMQAEYFPP
401: REDVILHKET PTDLYILVTG AVDLRSNIHG NEQVCYYIHK RVAAGEVFGE IGVLCHTPQP YTARTVELSQ ILRLSSSTFM NMIQENAGDG IIIMNNLLQK
501: LKLEQSPSAG VEESSHLLKE MLKGENWSFS SCYQDYKLQE QPSWESMEGR NNPCTVSGND RWDTSYDFDR TPMDLAENAE NNNICKLSLR YNNGMSGCSS
601: VDTDKRQTVS KRVVIHMHKT KSRSSRELMG KLINLPDSLE ELFKITGQKF NVDQPTMVVN QDDAEIDDIA VIRDGDHLFL L

Best Arabidopsis Sequence Match ( AT2G25600.1 )
(BLAST)

001: MEKKKVWFWG VKDDGEGGGG RGGGRTKDAE DDVADHLSRD GTMSQYSLSK GLLPSLGANN RSSRDVILPR FIVSPFDPRY RAWETFLVFL VLYTAWASPF
101: EFGFLQKPRP PLSILDNIVN GFFAVDIVLT FFVAFLDKVT YLLVDDPKRI AWRYASTWLI FDVVSTFPYE IFGSLLHESI QGYGIFSMLR LWRLRRVSNC
201: FARLEKDRKY SYFWVRCSKL LLVTLFVIHC GACFLYSIAA HYPDPSKTFM ALTDENWKES PIAVRYNTAM YWSITTFSTT GYGDIHGVNS REMTFILFYM
301: VFNLGLSAYI IGNMTNLVVH VTGRTRKFRD TIQAASGFGQ RNNLPVRLQD QMVAHLCLRY RTDSEGLQQQ EIIDSLPKAI RSSISHYLFY EVVDKIYLFH
401: GISNDLLFQL VTEMKAEYFP PKEDVILQNE APTDFYILVT GAVDIIARVN GVEQVVSEAQ RGHVFGEVGV LCYRPQLFTV RTKRLSQLLR LNRTVLLNLV
501: QANVGDGAII MNNLLQHLKD SEDPVMKGVL ADTEHMLAQG KMDLPLSLCF AAARGDDLLL HQLLRRGSSP NEMDKDGRTA LHIAASKGSH YCVVLLLEHG
601: ADPNIRDSEG NVPLWEAIIG RHREIAKLLA ENGAKLSLDS VSYFSGLAVE KNCLDALKDI IKYGGDVTLP DGNGTTALHR AVSEGHLEIV KFLLDQGADL
701: DWPDSYGWTP RGLADHQGNE EIKTLFHNHR PVEKKPKPIP GIPQSPVTGK PLMKYSSEPT MHSGELVLDG GQVVVSQKRK LNNFRNSLFG IISAANSADD
801: GGEVPRSPAV PGGGGSMIYP ERVTISSPEN GETGGKVVLL PNSMEELLKI GENKMGFVPT KVLTREGAEI DDITLIRDGD FLLLSRDP

Arabidopsis Description

AKT6Potassium channel AKT6 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXE6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.